Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Calonectria_20pseudonaviculata_20[genbank_20GCA_5F001696505.1_202016
-07-28] 1,340 sequences; 51,439,042 total letters
Query= NC_002331.1
Length=178733
Score E
Sequences producing significant alignments: (Bits) Value
seq732 116 4e-21
seq1144 107 2e-18
>seq732
Length=233276
Score = 116 bits (128), Expect = 4e-21
Identities = 148/201 (74%), Gaps = 2/201 (1%)
Strand=Plus/Plus
Query 42987 GTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCA 43046
||||||||||| || || ||||| || ||| || || | || || ||||||||||||
Sbjct 60373 GTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTACCA 60432
Query 43047 GCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTG 43106
|| || || |||||||||||||| | || | || |||||||||| ||| || |||
Sbjct 60433 GCAAAGATAAGTCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTG 60492
Query 43107 AGCGTCG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGT 43165
| ||| | | | |||||| || ||||| || | ||||| || || ||||| || ||
Sbjct 60493 A-CGTTGTCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATCGTCTTCCCCGTGAGGGT 60551
Query 43166 CTTTACAAAGATTTGCAtttt 43186
||| || ||||| ||||| ||
Sbjct 60552 CTTGACGAAGATCTGCATCTT 60572
>seq1144
Length=167757
Score = 107 bits (118), Expect = 2e-18
Identities = 141/193 (73%), Gaps = 2/193 (1%)
Strand=Plus/Minus
Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051
|||||| ||||| |||||||||| || || || | || || |||||||| || |||||
Sbjct 91856 CTCCTTCTGAATGTTGTAATCAGAGAGTGTTCGGCCATCCTCAAGCTGCTTTCCGGCGAA 91797
Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111
||||||||||||||||| | || | | |||||| ||| || | || | | | |||
Sbjct 91796 AATGAGTCGCTGCTGGTCCGGAGGAATTCCCTCCTTATCC-TGGATCTTCGACTTAACGT 91738
Query 43112 CG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 43170
| | | |||||| ||| ||||| |||| || || || ||||| || || ||||| |
Sbjct 91737 TGTCAATAGTGTCGGACGACTCCACCTCGAGGGTAATAGTCTTGCCAGTGAGAGTCTTGA 91678
Query 43171 CAAAGATTTGCAt 43183
| || || |||||
Sbjct 91677 CGAAAATCTGCAT 91665
Score = 98.7 bits (108), Expect = 1e-15
Identities = 139/193 (72%), Gaps = 2/193 (1%)
Strand=Plus/Minus
Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051
|||||| ||||| |||||||||| || || || | || || |||||||| || |||||
Sbjct 92084 CTCCTTCTGAATGTTGTAATCAGAGAGGGTTCGGCCATCCTCAAGCTGCTTTCCGGCGAA 92025
Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111
||||||||||||||||| | || | | |||||| ||| || | || | | | |||
Sbjct 92024 AATGAGTCGCTGCTGGTCCGGAGGAATTCCCTCCTTATCC-TGGATCTTCGACTTAACGT 91966
Query 43112 CG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 43170
| | | |||||| || || || || | || || || || || || | ||||| |
Sbjct 91965 TGTCAATAGTGTCGGATGACTCGACCTCAAGGGTAATCGTCTTTCCAGTCAAAGTCTTCA 91906
Query 43171 CAAAGATTTGCAt 43183
|||||||||||||
Sbjct 91905 CAAAGATTTGCAT 91893
Score = 86.0 bits (94), Expect = 7e-12
Identities = 129/181 (71%), Gaps = 2/181 (1%)
Strand=Plus/Minus
Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051
||| || || |||||||| || | || || || | || || |||||||| ||||| ||
Sbjct 91628 CTCTTTCTGGATATTGTAGTCGGAAAGGGTTCGGCCATCCTCAAGCTGCTTGCCAGCAAA 91569
Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111
||||| ||||||||||| | || | || ||||||||| ||| | |||| | | |||
Sbjct 91568 GATGAGACGCTGCTGGTCCGGGGGGATGCCTTCCTTGTCC-TGAATCTTTGACTTAACGT 91510
Query 43112 CG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 43170
| | | || || || || || |||| |||||||| ||||| || || ||||| |
Sbjct 91509 TGTCGATGGTATCAGAAGACTCGACCTCGAGAGTGATGGTCTTGCCAGTGAGGGTCTTGA 91450
Query 43171 C 43171
|
Sbjct 91449 C 91449
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 571808022055200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |