Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calonectria_20pseudonaviculata_20[genbank_20GCA_5F001696505.1_202016 -07-28] 1,340 sequences; 51,439,042 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq907 120 7e-22 >seq907 Length=75695 Score = 120 bits (132), Expect = 7e-22 Identities = 237/342 (69%), Gaps = 18/342 (5%) Strand=Plus/Minus Query 248809 GATTTGGAGTACGATTTCTTTGCTTTCAAAACGCTGGAGAAATCGTATCTCCTCAAAATT 248868 ||||| | ||| | | ||||| ||||| || || ||| ||| || |||||||| ||| Sbjct 18710 GATTTCAACTACCAATACTTTGGCTTCAAGACCCTCGAGCGATCTTACCTCCTCAAGATT 18651 Query 248869 GATGGCAAGATCGTGGAACGAATTCAGCACATGTTGATGCGAGTGGCTGTCGGGATTCAC 248928 ||||| ||||| || || ||| ||||||||| | ||||| || ||||||| || | Sbjct 18650 GATGGTAAGATTGTTGAGCGACCGCAGCACATGATTATGCGTGTCTCTGTCGGTAT---C 18594 Query 248929 AAGGATGACAT-AGAGAGCGTG--CTCGAGACGTACACCGGAATGAG--TGAACGCTGGA 248983 || ||||| | ||||||| |||||||| |||| | ||| |||| | Sbjct 18593 TGGGGTGACAACATTGAGCGTGTCCTCGAGACCTACAACCTCATGTCCATGAAG--TTCT 18536 Query 248984 TGACACATGCCACACCGACGCTCTTCAACGCCGGTAC-CGTCAACAATCAGCTGAGCTCG 249042 | |||||||| | || || ||||||||||| ||||| | ||| | |||||| || Sbjct 18535 TCACACATGCTTCTCCCACACTCTTCAACGCTGGTACTCCTCAGCCC-CAGCTGTCTTCA 18477 Query 249043 TGCTTTCTTCTTGCCATGCAAGACGACTCTGTCGACGGCATTTATGACACGCTTAAACAG 249102 ||||| || | | |||| | || ||| | | || || ||||||||||| || | || Sbjct 18476 TGCTTCCTGGTCGACATGAAGGAGGACAGTATTGAGGGTATTTATGACACCCTCA---AG 18420 Query 249103 AC---GGCGAAGATTTCTAAATTCGCGGGCGGAATCGGTCTC 249141 || || | ||| || ||| | || || || ||||||||| Sbjct 18419 ACCTGTGCCATGATCTCCAAAATGGCTGGTGGCATCGGTCTC 18378 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1073747964773120