Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calonectria_20pseudonaviculata_20[genbank_20GCA_5F001696505.1_202016 -07-28] 1,340 sequences; 51,439,042 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq907 251 6e-62 seq1144 93.3 4e-14 seq732 91.5 1e-13 >seq907 Length=75695 Score = 251 bits (278), Expect = 6e-62 Identities = 633/952 (66%), Gaps = 10/952 (1%) Strand=Plus/Plus Query 23027 GAGGCAAGATTGCATACGGCCACCTCGTCTTTGGA-CG-TGTACTCTACAATTTCGGTAC 23084 || || || ||||| ||||| ||||| || ||| || |||| || | || || || | Sbjct 17785 GAAGCGAGGTTGCAGACGGCGACCTCATCA--GGAGCGCTGTATTCGATGATCTCAGTGC 17842 Query 23085 ATAGATTGCTACACTTTATCGTGCCCAAATTGCTCTGGTTGCTTTTTCGATTGCACGAAT 23144 | || ||| || || || || | || ||||||| || || || ||| || Sbjct 17843 AAAGGTTGGAACTGCGGATAGTACCGAGGTTCTTCTGGTTACTCTTGCGGTTGGCGTGAT 17902 Query 23145 CCTTGTAGAGCATGTACGGCGTGCCCGTCTCGACCTGCGACTCGATGATCGCTCGCCACA 23204 ||||||| |||||| | || |||| || ||| ||| | ||||| || || ||| | Sbjct 17903 CCTTGTAAAGCATGAAGGGGTTGCCAGTTTCGGTCTGAGCCTCGAGAATGGCGTACCAGA 17962 Query 23205 TAGTCTGAGCGTGAACACGTCGCACGTACCT--GCCTTCTTCCTCGTACTTTTGGTACAA 23262 | || || | | ||| || |||| ||| | | |||||| | | ||| | Sbjct 17963 GCTTTTGGGCCTTCATG-GTCTTGCG-ACCTTTGCCGGCCTTCTCGTAGCTCTCGTAGAG 18020 Query 23263 CGCGTCAAATTCGGCACCGTAACAGTCGGCCAGGCCGGGCGATTGCATCGGACACATGAG 23322 || ||||| || | || || ||||| || || || || | | | |||||||| || Sbjct 18021 AGCCTCAAACTCATCGCCATAGCAGTCAGCAAGACCAGGGCACTCGTTGGGACACATTAG 18080 Query 23323 ACTCCACATTGAGTCATTTTCAACGCGTCTCATAAAAAGATCCGGTATCCATAGAGCGTA 23382 | |||| || || || || || |||| || | ||| || ||||| |||||| Sbjct 18081 AGTCCAGTCGCCGTTCTTCTCCACACGCTTCATGAACAAATCGGGGATCCACAGAGCGAG 18140 Query 23383 GAACAGTTCGCGGGCGCGCACCTCCTCTTTGCCGGTGTTCTTTTTCAAATCCAAAAAGTC 23442 |||||| || || || || |||||||| || || |||||| | ||||| ||| || Sbjct 18141 GAACAGGTCACGAGCACGGACCTCCTCCTTTCCATGGTTCTTGCGAAGATCCAGAAATTC 18200 Query 23443 CAACACGTCCGCATGCCACGGCTCGAGGTAAACGGCAAACGCGCCCGGTCTCTTATTGCC 23502 || ||||| || ||||| ||||||||||| | ||| || || || |||| ||| ||||| Sbjct 18201 GAATACGTCGGCGTGCCAAGGCTCGAGGTAGATGGCGAAAGCACCGGGTCGCTTGTTGCC 18260 Query 23503 GCCCTGATCGACGTAACGGGCCGTGTTGTTGTACACTCTTAGCATCGGCACGAGACCGTT 23562 |||||||| || || || || ||||||||| | || | ||||| || | |||||| Sbjct 18261 ACCCTGATCAACATATCGAGCAGTGTTGTTGAATACACGGAGCATGGGTGTCACACCGTT 18320 Query 23563 GGACGCGCCGCCTACGCCCGCCACACTCGAACCTTTTGCTCGAACGTTGTGAACGTGGAA 23622 ||| | ||| || || | | || || | || || | |||||||| || Sbjct 18321 GGAGGTACCGTTGGTACCGGCAATATAAGAGCCAGTGGCACGGATACGGTGAACGTTGAG 18380 Query 23623 ACCTATGCCTCCGCCCGATTTCGATATCATCGCGCATTGTTTCAGAGTGTCGTAGATGCC 23682 ||| ||||| || || ||| || ||||| || || || || ||||| || || || Sbjct 18381 ACCGATGCCACCAGCCATTTTGGAGATCATGGCACAGGTCTTGAGGGTGTCATAAATACC 18440 Query 23683 CTCGATGCTGTCCTCTTTGGTCGCGACCAAGAAACACGAAGACATTTGCGCTTTGGGCGT 23742 ||| || |||||||| || | |||||| ||| || ||||||| || | | || || Sbjct 18441 CTCAATACTGTCCTCCTTCATGTCGACCAGGAAGCATGAAGACAGCTGGGGCTGAGGAGT 18500 Query 23743 AGCGGCCGAGAACAGTGTCGGGCTGGCGTGCGTAAAGTA-TCCATTCGACATTAGATTGT 23801 | | || ||| ||||| || || || || ||| | | || | ||||| || |||| Sbjct 18501 ACCAGCGTTGAAGAGTGTGGGAGAAGCATGTGTGAAGAACTTCA-TGGACATGAGGTTGT 18559 Query 23802 ACGTGTCGATGGCGGCATCAATGTCCTCTCCGTGTATACCGATGGCGACGCGCATCATCA 23861 | || |||| | | ||||||| || || ||||||| | ||| ||||| |||| Sbjct 18560 AGGTCTCGAGGACACGCTCAATGTTGTCACCCCAGATACCGACAGAGACACGCATAATCA 18619 Query 23862 TGTATTGAGGTCTCTCGACCGTGACGCCGTTAATTTTGAACAGATATGAACGTTGCATCG 23921 ||| || |||| ||| || | || | ||| |||| || || || || | | | Sbjct 18620 TGTGCTGCGGTCGCTCAACAATCTTACCATCAATCTTGAGGAGGTAAGATCGCTCGAGGG 18679 Query 23922 TTTTAAATCCAAAATAGTCATAGTTAAAGTCACGATCGTGCACTATGGCCGA 23973 | || || ||||| || | ||||| || || ||||||| ||| ||||| || Sbjct 18680 TCTTGAAGCCAAAGTATTGGTAGTTGAAATCGCGATCGTACACAATGGCAGA 18731 Score = 100 bits (110), Expect = 3e-16 Identities = 233/347 (67%), Gaps = 6/347 (2%) Strand=Plus/Plus Query 22255 CTGATCGATAAACGCTCCTCGATCGGCGGCCATATTTATCAATGTACGCATCGACATTTC 22314 ||| || || || || ||||| ||||| ||||| | | || | |||| || || || Sbjct 17013 CTGGTCAATGAAAGCGCCTCGGTCGGCAGCCATCTGGACCACTTGACGCTGGGAGATCTC 17072 Query 22315 CCATACGGTCTTGTACAGTTGCCTGATCTCTAAC-GGTATCGATTCG--ATCCTCTGGAC 22371 ||| ||||||||||| || |||| | | | | || || ||| | || |||| | Sbjct 17073 CCAGACGGTCTTGTAGAGA-GCCTTAACATCAGCAGGAAT--ATTGGGAATATTCTGAAT 17129 Query 22372 GGACCCGTTATTGTGTATGATCAAATTTTTAATCGTATCGTTCCACAAACCGATGGCGGT 22431 || |||| | | ||||| ||||| || | ||| ||| | || ||| || Sbjct 17130 AGAACCGTCCTCGGCGATGATTCGGTTTTTCATGGCATCAGACCAAAGCCCCATGTCGAC 17189 Query 22432 CAAATCTTTGACCAGATGACGGTTCACCACTTGAAACTCGCCGGACAAGACGCGGCGTTG 22491 | ||| || | || |||| || || || ||||| || | |||||| || ||| Sbjct 17190 AAGATCCTTAAGAAGCCAGGGGTTGACGACCTGGAACTCACCAGCCAAGACACGACGTGA 17249 Query 22492 GTAAATGTTGGATGTGAACGGTTCGAAAGATTCATTGTTTCCCAGTATCTGAGCGGTCGA 22551 ||| |||||||||||| | || |||||| |||| ||||| |||| ||||||| ||| Sbjct 17250 GTATATGTTGGATGTGTAAGGCTCGAAACATTCGTTGTTACCCAAAATCTGAGAGGTACT 17309 Query 22552 AGCGGTCGGCATCGGCGCCAACAGTAGCGAGTTTCTCAAGCCGTGCT 22598 || || ||||| ||||||| || || ||| | | |||||||| Sbjct 17310 GGCAGTAGGCATGGGCGCCATGAGCAGACTGTTACGGATGCCGTGCT 17356 >seq1144 Length=167757 Score = 93.3 bits (102), Expect = 4e-14 Identities = 150/214 (70%), Gaps = 4/214 (2%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| |||||||| |||||||| || ||||| || || ||| |||| || || ||||| Sbjct 91665 ATGCAGATTTTCGTCAAGACTCTCACTGGCAAGACTATTACCCTCGAGGTGGAGTCGTCC 91724 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| | | || | || || || || ||| ||||| || | || || |||||| Sbjct 91725 GACACTATTGACAACGTTAAGTCGAAGATCCAGGATAAGGAGGGAATTCCTCCGGACCAG 91784 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGA--CTCTATGACTATGAGCGATTATA 31370 ||||| || || ||||| || || ||| | || || | | ||| | ||||| | Sbjct 91785 CAGCGACTCATTTTCGCCGGAAAGCAGCTTGAGGATGGCCGAACACTCT--CTGATTACA 91842 Query 31371 ACATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 ||||||| || || || || || || ||||| || Sbjct 91843 ACATTCAGAAGGAGTCCACCCTCCACCTGGTCCT 91876 >seq732 Length=233276 Score = 91.5 bits (100), Expect = 1e-13 Identities = 149/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 31190 AACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCG 31249 || ||||| || ||||| ||||| || || || || ||||||||| | || || || | Sbjct 60572 AAGATGCAGATCTTCGTCAAGACCCTCACGGGGAAGACGATCACCCTTGAGGTGGAGTCT 60513 Query 31250 TCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGAC 31309 ||||||| |||| | ||||| | || ||||||||| ||| | || || ||| Sbjct 60512 TCCGACACCATCGACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGCATTCCCCCGGAC 60453 Query 31310 CAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTAT 31369 |||||||| || || || ||||| || ||| | || || || ||||||| || Sbjct 60452 CAGCAGCGACTTATCTTTGCTGGTAAGCAGCTCGAGGATGGCCGCACCCTGAGCGACTAC 60393 Query 31370 AACATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 ||||| || || || ||||| || ||||| || Sbjct 60392 AACATCCAGAAGGAGAGCACTCTCCACCTGGTCCT 60358 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445758933412800