Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Calonectria_20pseudonaviculata_20[genbank_20GCA_5F001696505.1_202016
-07-28] 1,340 sequences; 51,439,042 total letters
Query= NC_003225.3
Length=309286
Score E
Sequences producing significant alignments: (Bits) Value
seq1157 114 3e-20
seq907 109 1e-18
>seq1157
Length=14967
Score = 114 bits (126), Expect = 3e-20
Identities = 294/445 (66%), Gaps = 17/445 (4%)
Strand=Plus/Plus
Query 101918 GTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCCATTTTCTGG 101977
||||| || ||||| || || || || || || || ||||||||||| || || ||||||
Sbjct 10715 GTTGCATTCGCTGCTGTCGAGGGTATATTTTTCAGCGGTGCATTCGCTTCTATCTTCTGG 10774
Query 101978 ATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCATTTCTAGGGAC 102037
| ||||| | ||| || |||||||| | |||| ||| |||||| |||| ||| | ||
Sbjct 10775 TTGAAGAAGCGAGGTCTTATGCCTGGTTTAACCTTCTCTAATGAGCTCATCTCTCGTGAT 10834
Query 102038 GAAGGTCTTCATCGCGACTTTGCATGCATGCT----GTTGA--AAAAGGGTTTTGTTGAT 102091
|| |||||||| ||||| |||||| | || | | ||||| ||
Sbjct 10835 GAGGGTCTTCACACTGACTTCGCATGCCTTCTTCACTCTCATCTCAAGGGCCGTG----- 10889
Query 102092 ACCCCATCAAG-AGAAAGGATTCTTGAAATTGTCACTGAAGCCGTCCGAATTGAACAAGA 102150
||| |||| || | |||| || || | ||||| |||||| || ||| | ||
Sbjct 10890 ---CCAGCAAGCAGGTA--ATTCAGGACATCATTACTGATGCCGTCTCTATCGAAAAGGA 10944
Query 102151 ATTTCTCACAGTTTCCCTGCCTGTTAAATTAGTGGGAATGAACTGCAAGTTGATGAGCCA 102210
||| || || | | ||||| | | | || ||||||| | | |||| ||
Sbjct 10945 ATTCCTGACCGAGGCATTGCCTTGTGCTCTGCTTGGTATGAACTCGGATCTTATGAAGCA 11004
Query 102211 GTACATTGAATTTGTGGCAGATAAACTATTGGTTGAAATGGGACTAGAAAAGCACTATAA 102270
|||||| || || || || || || | || | | || || ||| ||| ||
Sbjct 11005 GTACATCGAGTTCGTTGCCGACCGTCTTCTTGTCGCTCTTGGTAACGAGAAGGTCTACAA 11064
Query 102271 TGTTACCAACCCCTTCCCATTCATGGACAATATTTCCCTCGAGAATAAGACCAACTTTTT 102330
||||||||||||| |||||||| ||||| ||||||| |||||| ||||| ||
Sbjct 11065 GTCTACCAACCCCTTCGACTTCATGGAGAATATCTCCCTCGGTGGTAAGACTAACTTCTT 11124
Query 102331 TGAAAAGAGAGTCGCCGAGTATCAA 102355
||| ||| | || | || || |||
Sbjct 11125 TGAGAAGCGTGTAGGTGATTACCAA 11149
>seq907
Length=75695
Score = 109 bits (120), Expect = 1e-18
Identities = 190/271 (70%), Gaps = 4/271 (1%)
Strand=Plus/Plus
Query 94774 TGAAAGTGGATGCCGAGTCCTCCAGCAGTCTTGGAGATGATTGCCGCCTCCTTAAGAGTA 94833
|||| || || |||| || ||||| | |||||||| || || ||| || ||
Sbjct 18370 TGAACGTTGAGACCGATGCCACCAGCCATTTTGGAGATCATGGCACAGGTCTTGAGGGTG 18429
Query 94834 TCATAAATACCCTCAATGCTATCATCTTGAAGGCCCAGAAGGAAGCACGAGGAAAGTTGG 94893
||||||||||||||||| || || || | | | | | |||||||| || || || |||
Sbjct 18430 TCATAAATACCCTCAATACTGTCCTCCTTCATGTCGACCAGGAAGCATGAAGACAGCTGG 18489
Query 94894 GG-TGTGACTGTTCCACAATTAAACAGTGTGGGGGAAGCATGGGTAAAATAGTGCCTCGA 94952
|| || | || ||| || || |||||||| |||||||| || || | | | | ||
Sbjct 18490 GGCTGAG-GAGTACCAGCGTTGAAGAGTGTGGGAGAAGCATGTGTGAAGAACTTCATGGA 18548
Query 94953 CATGAGATCATATGTTTCAATGACAGATTTGATG-TCTGATCCGTGAATGCCGACAGCCA 95011
|||||| | || || || | |||| | ||| | | | || | || ||||||| |
Sbjct 18549 CATGAGGTTGTAGGTCTCGAGGACACGCTCAATGTTGTCACCCCAG-ATACCGACAGAGA 18607
Query 95012 CACGCATAATCATGTCCTGAGGGCGCTCAAC 95042
||||||||||||||| ||| || ||||||||
Sbjct 18608 CACGCATAATCATGTGCTGCGGTCGCTCAAC 18638
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 989567010079700
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |