Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calonectria_20pseudonaviculata_20[genbank_20GCA_5F001696505.1_202016 -07-28] 1,340 sequences; 51,439,042 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq1157 114 3e-20 seq907 109 1e-18 >seq1157 Length=14967 Score = 114 bits (126), Expect = 3e-20 Identities = 294/445 (66%), Gaps = 17/445 (4%) Strand=Plus/Plus Query 101918 GTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCCATTTTCTGG 101977 ||||| || ||||| || || || || || || || ||||||||||| || || |||||| Sbjct 10715 GTTGCATTCGCTGCTGTCGAGGGTATATTTTTCAGCGGTGCATTCGCTTCTATCTTCTGG 10774 Query 101978 ATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCATTTCTAGGGAC 102037 | ||||| | ||| || |||||||| | |||| ||| |||||| |||| ||| | || Sbjct 10775 TTGAAGAAGCGAGGTCTTATGCCTGGTTTAACCTTCTCTAATGAGCTCATCTCTCGTGAT 10834 Query 102038 GAAGGTCTTCATCGCGACTTTGCATGCATGCT----GTTGA--AAAAGGGTTTTGTTGAT 102091 || |||||||| ||||| |||||| | || | | ||||| || Sbjct 10835 GAGGGTCTTCACACTGACTTCGCATGCCTTCTTCACTCTCATCTCAAGGGCCGTG----- 10889 Query 102092 ACCCCATCAAG-AGAAAGGATTCTTGAAATTGTCACTGAAGCCGTCCGAATTGAACAAGA 102150 ||| |||| || | |||| || || | ||||| |||||| || ||| | || Sbjct 10890 ---CCAGCAAGCAGGTA--ATTCAGGACATCATTACTGATGCCGTCTCTATCGAAAAGGA 10944 Query 102151 ATTTCTCACAGTTTCCCTGCCTGTTAAATTAGTGGGAATGAACTGCAAGTTGATGAGCCA 102210 ||| || || | | ||||| | | | || ||||||| | | |||| || Sbjct 10945 ATTCCTGACCGAGGCATTGCCTTGTGCTCTGCTTGGTATGAACTCGGATCTTATGAAGCA 11004 Query 102211 GTACATTGAATTTGTGGCAGATAAACTATTGGTTGAAATGGGACTAGAAAAGCACTATAA 102270 |||||| || || || || || || | || | | || || ||| ||| || Sbjct 11005 GTACATCGAGTTCGTTGCCGACCGTCTTCTTGTCGCTCTTGGTAACGAGAAGGTCTACAA 11064 Query 102271 TGTTACCAACCCCTTCCCATTCATGGACAATATTTCCCTCGAGAATAAGACCAACTTTTT 102330 ||||||||||||| |||||||| ||||| ||||||| |||||| ||||| || Sbjct 11065 GTCTACCAACCCCTTCGACTTCATGGAGAATATCTCCCTCGGTGGTAAGACTAACTTCTT 11124 Query 102331 TGAAAAGAGAGTCGCCGAGTATCAA 102355 ||| ||| | || | || || ||| Sbjct 11125 TGAGAAGCGTGTAGGTGATTACCAA 11149 >seq907 Length=75695 Score = 109 bits (120), Expect = 1e-18 Identities = 190/271 (70%), Gaps = 4/271 (1%) Strand=Plus/Plus Query 94774 TGAAAGTGGATGCCGAGTCCTCCAGCAGTCTTGGAGATGATTGCCGCCTCCTTAAGAGTA 94833 |||| || || |||| || ||||| | |||||||| || || ||| || || Sbjct 18370 TGAACGTTGAGACCGATGCCACCAGCCATTTTGGAGATCATGGCACAGGTCTTGAGGGTG 18429 Query 94834 TCATAAATACCCTCAATGCTATCATCTTGAAGGCCCAGAAGGAAGCACGAGGAAAGTTGG 94893 ||||||||||||||||| || || || | | | | | |||||||| || || || ||| Sbjct 18430 TCATAAATACCCTCAATACTGTCCTCCTTCATGTCGACCAGGAAGCATGAAGACAGCTGG 18489 Query 94894 GG-TGTGACTGTTCCACAATTAAACAGTGTGGGGGAAGCATGGGTAAAATAGTGCCTCGA 94952 || || | || ||| || || |||||||| |||||||| || || | | | | || Sbjct 18490 GGCTGAG-GAGTACCAGCGTTGAAGAGTGTGGGAGAAGCATGTGTGAAGAACTTCATGGA 18548 Query 94953 CATGAGATCATATGTTTCAATGACAGATTTGATG-TCTGATCCGTGAATGCCGACAGCCA 95011 |||||| | || || || | |||| | ||| | | | || | || ||||||| | Sbjct 18549 CATGAGGTTGTAGGTCTCGAGGACACGCTCAATGTTGTCACCCCAG-ATACCGACAGAGA 18607 Query 95012 CACGCATAATCATGTCCTGAGGGCGCTCAAC 95042 ||||||||||||||| ||| || |||||||| Sbjct 18608 CACGCATAATCATGTGCTGCGGTCGCTCAAC 18638 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989567010079700