Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calonectria_20pseudonaviculata_20[genbank_20GCA_5F001696505.1_202016 -07-28] 1,340 sequences; 51,439,042 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq907 141 1e-28 >seq907 Length=75695 Score = 141 bits (156), Expect = 1e-28 Identities = 316/472 (67%), Gaps = 2/472 (0%) Strand=Plus/Minus Query 96864 CGATACGTTACACAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCT 96923 ||||| ||| ||||| ||||| || || || || ||| | ||| ||||| | || ||| Sbjct 18278 CGATATGTTGATCAGGGTGGCAACAAGCGACCCGGTGCTTTCGCCATCTACCTCGAGCCT 18219 Query 96924 TGGCACGCGGACGTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCA 96983 |||||||| ||||| || || ||| | || | ||||| ||| ||| || |||| Sbjct 18218 TGGCACGCCGACGTATTCGAATTTCTGGATCTTCGCAAGAACCATGGAAAGGAGGAGGTC 18159 Query 96984 CGAGCCAGGGACTTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGTCAAC 97043 || || | ||| |||| || || ||| | || ||||||||||||||||| || | Sbjct 18158 CGTGCTCGTGACCTGTTCCTCGCTCTGTGGATCCCCGATTTGTTCATGAAGCGTGTGGAG 18099 Query 97044 GACGGTGGCTACTGGAGCCTAATGTGCCCCGACTCGTCACCCGGTCTGTCCGATTGCTGG 97103 | ||| |||||| |||||||| ||| || || || ||||| | || |||| Sbjct 18098 AAGAACGGCGACTGGACTCTAATGTGTCCCAACGAGTGCCCTGGTCTTGCTGACTGCTAT 18039 Query 97104 GGCGAAGAGTTTGAGGCCAAGTACACGGCCTACGAGCAAGAGGGCCGA-TACGTGAGACG 97162 ||||| ||||||||||| ||| | ||||||| | | ||| | || |||| Sbjct 18038 GGCGATGAGTTTGAGGCTCTCTACGAGAGCTACGAGAAGGCCGGCAAAGGTCGCAAGACC 17979 Query 97163 AGTCGATGCACGAGAACTGTGGAAGGCCATCGTGACGGCTCAGGTAGAGACTGGAACTCC 97222 | | | || | | | || ||| | ||||| | ||||||| || ||||| | || Sbjct 17978 A-TGAAGGCCCAAAAGCTCTGGTACGCCATTCTCGAGGCTCAGACCGAAACTGGCAACCC 17920 Query 97223 GTACATTCTCTACAAGGATACCGTGAATCGCAACAGCAACCAACGCCACTTGGGCACCAT 97282 | ||| || ||||||||| || || ||||| || ||||| || | || || || Sbjct 17919 CTTCATGCTTTACAAGGATCACGCCAACCGCAAGAGTAACCAGAAGAACCTCGGTACTAT 17860 Query 97283 CAAGGGCTCCAATCTGTGCACGGAAATTGTAGAGTACGCCTCTCCGGACGAG 97334 | | ||||| || ||||| || || | || ||| | |||| || ||| Sbjct 17859 CCGCAGTTCCAACCTTTGCACTGAGATCATCGAATACAGCGCTCCTGATGAG 17808 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741046787258400