Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Calonectria_20pseudonaviculata_20[genbank_20GCA_5F001696505.1_202016
-07-28] 1,340 sequences; 51,439,042 total letters
Query= NC_004156.2
Length=231621
Score E
Sequences producing significant alignments: (Bits) Value
seq907 141 1e-28
>seq907
Length=75695
Score = 141 bits (156), Expect = 1e-28
Identities = 316/472 (67%), Gaps = 2/472 (0%)
Strand=Plus/Minus
Query 96864 CGATACGTTACACAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCT 96923
||||| ||| ||||| ||||| || || || || ||| | ||| ||||| | || |||
Sbjct 18278 CGATATGTTGATCAGGGTGGCAACAAGCGACCCGGTGCTTTCGCCATCTACCTCGAGCCT 18219
Query 96924 TGGCACGCGGACGTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCA 96983
|||||||| ||||| || || ||| | || | ||||| ||| ||| || ||||
Sbjct 18218 TGGCACGCCGACGTATTCGAATTTCTGGATCTTCGCAAGAACCATGGAAAGGAGGAGGTC 18159
Query 96984 CGAGCCAGGGACTTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGTCAAC 97043
|| || | ||| |||| || || ||| | || ||||||||||||||||| || |
Sbjct 18158 CGTGCTCGTGACCTGTTCCTCGCTCTGTGGATCCCCGATTTGTTCATGAAGCGTGTGGAG 18099
Query 97044 GACGGTGGCTACTGGAGCCTAATGTGCCCCGACTCGTCACCCGGTCTGTCCGATTGCTGG 97103
| ||| |||||| |||||||| ||| || || || ||||| | || ||||
Sbjct 18098 AAGAACGGCGACTGGACTCTAATGTGTCCCAACGAGTGCCCTGGTCTTGCTGACTGCTAT 18039
Query 97104 GGCGAAGAGTTTGAGGCCAAGTACACGGCCTACGAGCAAGAGGGCCGA-TACGTGAGACG 97162
||||| ||||||||||| ||| | ||||||| | | ||| | || ||||
Sbjct 18038 GGCGATGAGTTTGAGGCTCTCTACGAGAGCTACGAGAAGGCCGGCAAAGGTCGCAAGACC 17979
Query 97163 AGTCGATGCACGAGAACTGTGGAAGGCCATCGTGACGGCTCAGGTAGAGACTGGAACTCC 97222
| | | || | | | || ||| | ||||| | ||||||| || ||||| | ||
Sbjct 17978 A-TGAAGGCCCAAAAGCTCTGGTACGCCATTCTCGAGGCTCAGACCGAAACTGGCAACCC 17920
Query 97223 GTACATTCTCTACAAGGATACCGTGAATCGCAACAGCAACCAACGCCACTTGGGCACCAT 97282
| ||| || ||||||||| || || ||||| || ||||| || | || || ||
Sbjct 17919 CTTCATGCTTTACAAGGATCACGCCAACCGCAAGAGTAACCAGAAGAACCTCGGTACTAT 17860
Query 97283 CAAGGGCTCCAATCTGTGCACGGAAATTGTAGAGTACGCCTCTCCGGACGAG 97334
| | ||||| || ||||| || || | || ||| | |||| || |||
Sbjct 17859 CCGCAGTTCCAACCTTTGCACTGAGATCATCGAATACAGCGCTCCTGATGAG 17808
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 741046787258400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |