Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calonectria_20pseudonaviculata_20[genbank_20GCA_5F001696505.1_202016 -07-28] 1,340 sequences; 51,439,042 total letters Query= NC_005337.1 Length=134431 Score E Sequences producing significant alignments: (Bits) Value seq881 100 2e-16 >seq881 Length=186784 Score = 100 bits (110), Expect = 2e-16 Identities = 118/160 (74%), Gaps = 0/160 (0%) Strand=Plus/Minus Query 5594 AGCTGCGCTATTCGGTCGCCCGTCTTTACCTCGAAATCGTTGTGGCCGAAGTTGAACAGC 5653 ||||| || | ||||||||| ||| | ||| || ||| | | || |||||| ||| Sbjct 7579 AGCTGGGCGACACGGTCGCCCTCCTTGATCTCAAAGTCGGTCTCTGCGTGGTTGAAGAGC 7520 Query 5654 ACCACGCCCACGTTGCCGCGGTAGTCGGCGTCTATCACGCCCGCGCCCACGTCGATGAAG 5713 | ||| || | ||| |||||||||||||| || || || ||||| ||| |||||| Sbjct 7519 AGCACCTTGACCTCGCCACGGTAGTCGGCGTCAATGACACCTGCGCCGGTGTCTATGAAG 7460 Query 5714 TGCTTGACCGCCAGGCCGGAGCGGGGAGCCACGCGGCCGT 5753 |||||| | || ||||| |||||||| || | ||||||| Sbjct 7459 TGCTTGGCAGCAAGGCCAGAGCGGGGGGCAATACGGCCGT 7420 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 430047376674080