Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Calonectria_20pseudonaviculata_20[genbank_20GCA_5F001696505.1_202016
-07-28] 1,340 sequences; 51,439,042 total letters
Query= NC_005839.2
Length=131680
Score E
Sequences producing significant alignments: (Bits) Value
seq1144 96.9 3e-15
seq732 84.2 2e-11
>seq1144
Length=167757
Score = 96.9 bits (106), Expect = 3e-15
Identities = 143/203 (70%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 48524 TGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCCAGCTGC 48583
|| || ||| |||||| |||||||||||||||| | | ||| | ||||| ||||||
Sbjct 91867 TGGAGGGTGGACTCCTTCTGAATGTTGTAATCAGAGAGTGTTCGGCCATCCTCAAGCTGC 91808
Query 48584 TTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTTC 48643
|| ||| || |||| | |||||||| ||| || | | ||||| ||| || |||
Sbjct 91807 TTTCCGGCGAAAATGAGTCGCTGCTGGTCCGGAGGAATTCCCTCCTTATCCTGGATCTTC 91748
Query 48644 TGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGTG 48703
||| | | || || |||| |||||| ||||| || || || || || |||
Sbjct 91747 GACTTAACGTTGTCAATAGTGTCGGACGACTCCACCTCGAGGGTAATAGTCTTGCCAGTG 91688
Query 48704 AGAGTTTTCACAAAAATCTGCAT 48726
||||| || || |||||||||||
Sbjct 91687 AGAGTCTTGACGAAAATCTGCAT 91665
>seq732
Length=233276
Score = 84.2 bits (92), Expect = 2e-11
Identities = 149/213 (70%), Gaps = 6/213 (3%)
Strand=Plus/Plus
Query 48524 TGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGT-CGCTCGTCCTCCAGCTG 48582
|| || ||||||||||| || |||||||| || || | || || | ||||| |||||
Sbjct 60367 TGGAGAGTGCTCTCCTTCTGGATGTTGTAGTC-GCTCAGGGTGCGGCCATCCTCGAGCTG 60425
Query 48583 CTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTT 48642
|||||| | | || | |||||||| ||| || | | ||||||||| || ||
Sbjct 60426 CTTACCAGCAAAGATAAGTCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTT 60485
Query 48643 CTGCTTGA--TAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCG 48700
||||| | | || ||||| |||| ||||||| ||| | || || || || ||
Sbjct 60486 GGACTTGACGTTGTCG--ATGGTGTCGGAAGACTCCACCTCAAGGGTGATCGTCTTCCCC 60543
Query 48701 GTGAGAGTTTTCACAAAAATCTGCATCGTGTCT 48733
||||| || || || || ||||||||| || ||
Sbjct 60544 GTGAGGGTCTTGACGAAGATCTGCATCTTGCCT 60576
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 421244320441340
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |