Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Calonectria_20pseudonaviculata_20[genbank_20GCA_5F001696505.1_202016
-07-28] 1,340 sequences; 51,439,042 total letters
Query= NC_006549.1
Length=140131
Score E
Sequences producing significant alignments: (Bits) Value
seq732 93.3 4e-14
seq1144 87.8 2e-12
>seq732
Length=233276
Score = 93.3 bits (102), Expect = 4e-14
Identities = 146/209 (70%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 94799 ACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCC 94858
|||| ||| | ||| ||||| || | ||| || ||||||| ||| | ||||||
Sbjct 60361 ACCAGGTGGAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCG 60420
Query 94859 AGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAA 94918
||||| || || ||||||| | || ||||| || || ||||| || || ||||| |
Sbjct 60421 AGCTGCTTACCAGCAAAGATAAGTCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGG 60480
Query 94919 ATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTT 94978
|| || | ||||||| | ||| ||||| | || || |||| ||||| || ||
Sbjct 60481 ATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATCGTCTTC 60540
Query 94979 CCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
|| || || || || || |||||||||||
Sbjct 60541 CCCGTGAGGGTCTTGACGAAGATCTGCAT 60569
>seq1144
Length=167757
Score = 87.8 bits (96), Expect = 2e-12
Identities = 113/156 (72%), Gaps = 0/156 (0%)
Strand=Plus/Minus
Query 94852 ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTT 94911
|||||| ||||| |||||| | || || | || ||||| || |||||||| || || ||
Sbjct 92048 ATCCTCAAGCTGCTTTCCGGCGAAAATGAGTCGCTGCTGGTCCGGAGGAATTCCCTCCTT 91989
Query 94912 GTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGAT 94971
|| | || || | ||| ||| | | | |||||| | ||||| |||| || ||
Sbjct 91988 ATCCTGGATCTTCGACTTAACGTTGTCAATAGTGTCGGATGACTCGACCTCAAGGGTAAT 91929
Query 94972 GGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
|| |||||||| | ||| ||||||||||| |||||
Sbjct 91928 CGTCTTTCCAGTCAAAGTCTTCACAAAGATTTGCAT 91893
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 448283691122400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |