Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Calonectria_20pseudonaviculata_20[genbank_20GCA_5F001696505.1_202016
-07-28] 1,340 sequences; 51,439,042 total letters
Query= NC_006639.1
Length=24748
Score E
Sequences producing significant alignments: (Bits) Value
seq349 179 6e-41
seq78 109 9e-20
>seq349
Length=97607
Score = 179 bits (198), Expect = 6e-41
Identities = 202/268 (75%), Gaps = 2/268 (1%)
Strand=Plus/Minus
Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
|| |||||||| || | ||| |||||| || |||||||| || || |||||||| |||||
Sbjct 20061 GCCAAGCGTCACCGAAAGAT-TCTTCGTGACAACATCCAGGGTATTACCAAGCCTGCTAT 20003
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551
||| ||||| |||||||||||||| ||||||||| | || | || |||| || ||||
Sbjct 20002 CCGACGTCTCGCTCGTCGTGGTGGTGTCAAGCGTATTTCCGCCATGATCTACGAGGAGAC 19943
Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611
|||| ||| |||||| ||||||| || || |||| ||| || || ||| |||||
Sbjct 19942 CCGTGGTGTCCTGAAGACCTTCCTCGAGGGTGTCATCCGTGACGCCGTCACCTACACCGA 19883
Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671
|||||| || || ||||| ||||| || | ||| | ||||| || | || || || ||
Sbjct 19882 GCACGCCAAGCGCAAGACCGTCACTTCGCTCGATGTTGTCTACGCCCTCAAGCGCCAGGG 19823
Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTAA 16699
||| | |||| ||||| || |||||
Sbjct 19822 CCGCACCCTTTACGGTTTCGGTGGTTAA 19795
>seq78
Length=44846
Score = 109 bits (120), Expect = 9e-20
Identities = 87/102 (85%), Gaps = 2/102 (2%)
Strand=Plus/Minus
Query 16432 CGCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTA 16490
||| |||||||| |||| ||| ||| || || |||||||| || |||||||||||||| |
Sbjct 16393 CGCCAAGCGTCACCGCAAGAT-TCTACGTGACAACATCCAGGGTATCACCAAGCCAGCCA 16335
Query 16491 TCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTG 16532
|||| ||||| ||||||||||| || ||||||||| ||||||
Sbjct 16334 TCCGACGTCTCGCTCGTCGTGGCGGTGTCAAGCGTATCTCTG 16293
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 79073974828620
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |