Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calonectria_20pseudonaviculata_20[genbank_20GCA_5F001696505.1_202016 -07-28] 1,340 sequences; 51,439,042 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq907 352 7e-92 seq881 84.2 6e-11 >seq907 Length=75695 Score = 352 bits (390), Expect = 7e-92 Identities = 1065/1628 (65%), Gaps = 30/1628 (2%) Strand=Plus/Minus Query 363547 TTCACGCACGCCACGCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCT 363606 ||||| || || | || ||| | | ||| ||||| |||| | | || ||| ||||||| Sbjct 18536 TTCACACATGCTTCTCCCACACTCTTCAACGCTGGTACTCCTCAGCCCCAGCTGTCTTCA 18477 Query 363607 TGCTTTCTTCTAAAAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAAT 363666 ||||| || | | |||||||| || || |||||||| | |||||| || |||| Sbjct 18476 TGCTTCCTGGTCGACATGAAGGAGGACAGTATTGAGGGTATTTATGACACCCTCAAGACC 18417 Query 363667 TGTGCTCTTATTTCCAAGAATGCAGGCGGAATTGGTGT-ATCGATCCACAATGTTCGTGC 363725 ||||| | || ||||| | || || || || ||| | | || || || | | ||||| Sbjct 18416 TGTGCCATGATCTCCAAAATGGCTGGTGGCATCGGTCTCAACGTTC-ACCGTATCCGTGC 18358 Query 363726 -ACAGAACAGTTACATTCGCGGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTC 363784 || | | ||| ||| ||| || || ||| || || || |||||||| | Sbjct 18357 CACTGG-CTCTTATATTGCCGGTACCAACGGTACCTCCAACGGTGTGACACCCATGCTCC 18299 Query 363785 GTGTGTTTGACAATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGT 363844 |||| || |||| ||||| | || || || |||||||| ||||| || || | Sbjct 18298 GTGTATTCAACAACACTGCTCGATATGTTGATCAGGGTGGCAACAAGCGACCCGGTGCTT 18239 Query 363845 TTGCTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAA 363904 | || || || ||||||||| || ||||| | || || ||||| || || || || | Sbjct 18238 TCGCCATCTACCTCGAGCCTTGGCACGCCGACGTATTCGAATTTCTGGATCTTCGCAAGA 18179 Query 363905 ACACGGGAAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACC 363964 || ||||| ||||| | ||||| ||||| |||||| || || ||| | | || Sbjct 18178 ACCATGGAAAGGAGGAGGTCCGTGCTCGTGACCTGTTCCTCGCTCTGTGGATCCCCGATT 18119 Query 363965 ATTTTATGAAGCGCGTGGAGGCAGGTAAGA--ATTGGTCACTCTTTTGCCCACACGAATG 364022 || |||||||| |||||| | | | | | ||| | || | || || |||| || Sbjct 18118 TGTTCATGAAGCGTGTGGAG--AAGAACGGCGACTGGACTCTAATGTGTCCCAACGAGTG 18061 Query 364023 TCCAGGTCTTTCCGA-TG-TATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATGAA 364080 || |||||| | || || ||||| | | || | || ||||| ||||| | || || Sbjct 18060 CCCTGGTCTTGCTGACTGCTATGGCG--ATGAGTTTGAGGCTCTCTACGAGAGCTACGAG 18003 Query 364081 TCGGAGGGAAAGGCTCGTAAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGAT 364140 || || || | ||| ||||| || || || ||||| |||| ||||| | || Sbjct 18002 AAGGCCGGCAAAGGTCGCAAGACCATGAAGGCCCAAAAGCTCTGGTACGCCATTCTCGAG 17943 Query 364141 TCGCAGATTGAGACAGGAACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCC 364200 | |||| || || || | |||| ||| | ||||| ||| |||||||||| Sbjct 17942 GCTCAGACCGAAACTGGCAACCCCTTCATGCTTTACAAGGATCACGCCAACCGCAAGAGT 17883 Query 364201 AACCAGCAGCACCTTGGTACAATTCAGCAGAGC-AACCTATGTACCGAGATTATTGAATA 364259 |||||| || |||| ||||| || | |||| | ||||| || || ||||| || ||||| Sbjct 17882 AACCAGAAGAACCTCGGTACTATCC-GCAGTTCCAACCTTTGCACTGAGATCATCGAATA 17824 Query 364260 CACCGCTCCCGACGAGACTGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTGT 364319 || |||||| || ||| ||||| || ||||| || || | || ||||| | ||||| Sbjct 17823 CAGCGCTCCTGATGAGGTCGCCGTCTGCAACCTCGCTTCCCTGGCCCTTCCTTCTTTTGT 17764 Query 364320 AAA----AG--ATGGTACTTTTGACCACCAGCATCTTTATGACGTAACCTATCATGCTAC 364373 | || ||| | | |||| ||| | || | || || || | || Sbjct 17763 TGACTACAGCAATGATTGCTATGACTTCCAAAAACTGCACGATGTCACTCAGACTGTCGT 17704 Query 364374 TTGCAATCTCGACAAGGTTATCGACAAGAATTATTATCCAATTCCTGAAGC-CG----AG 364428 | |||| || ||||| | || ||| || | ||||| ||| || || || || Sbjct 17703 TCGCAACCTTAACAAGATCATTGACGTCAACCACTATCCTGTTCAGGAGGCTCGTAACAG 17644 Query 364429 CGTTCTAATATGCGTCATCGCCCGATTGGTCTTGGTGTACAGGGCCTCGCTGACGTTTTT 364488 | || |||||||| || || |||||| ||||||| ||||| || || || | || Sbjct 17643 C-----AACATGCGTCACCGACCCATTGGTGTTGGTGTCCAGGGTCTTGCGGATGCATTC 17589 Query 364489 ATGATGCTCAAGATGGCATTTGATTCGCCTGACGCTCGTGTTCTAAATAAGGAGATCTTT 364548 | ||| ||| | || || || || || ||||||| || || || |||||||| Sbjct 17588 CTTGCCCTCCGCATGCCTTTCGAGTCCCCCGAAGCTCGTGAACTGAACAAACAGATCTTT 17529 Query 364549 GAAACAATGTATTTTGCCGCAATGACTGCTTCGTGTGATTTGGCAAAAACCAAGGGAAAG 364608 ||||| || ||| ||||| ||||||| || | || | || |||| Sbjct 17528 GAAACTATCTATCACGCCGCCCTGACTGCCTCAGTCCAGCTGTCCAAGGAGGAGGGTCCC 17469 Query 364609 TACTCTACTTATGAGGGGTCCCCTCTTTCGCAGGGAAAATTCCAGTTTGATCTATGGAAT 364668 |||||||| | |||| |||||| || |||| | ||||||| || | |||||| Sbjct 17468 TACTCTACCTTCAAGGGCTCCCCTACCTCTGAGGGTATTCTCCAGTTCGACATGTGGAAT 17409 Query 364669 GTCACGCCATCTGTCCGATGGAACTGGGATACGCTACGTTCCAACGTTAAGAAGCATGGT 364728 || | ||||| | || ||| ||||||| | || ||| | || ||| |||| || Sbjct 17408 GTGAAACCATCAGACCTCTGGGACTGGGAATCCCTCCGTGAGCAGGTCAAGGAGCACGGC 17349 Query 364729 ACTCGCAACTCCCTCGTTACAGCGCCCATGCCCACGGCTTCTACTGCACAGATCCTCGGA 364788 | || ||| || | | ||||||||||| || || ||| | ||||| | || Sbjct 17348 ATCCGTAACAGTCTGCTCATGGCGCCCATGCCTACTGCCAGTACCTCTCAGATTTTGGGT 17289 Query 364789 AACAACGAGTGCTTCGAACCGTTTACAAGCAATCTTTATTCACGCCGGGTTCTTTCCGGA 364848 |||||||| || ||||| || | ||| ||| | || ||||| || || | | || Sbjct 17288 AACAACGAATGTTTCGAGCCTTACACATCCAACATATACTCACGTCGTGTCTTGGCTGGT 17229 Query 364849 GAATTTCCGGTAGTTAATAAGTACCTAGTCAAGGATCTTTCCGACCGCGGGCTGTGGGGT 364908 || || | ||| || || | || | ||||||||| |||| ||||| ||| | Sbjct 17228 GAGTTCCAGGTCGTCAACCCCTGGCTTCTTAAGGATCTTGTCGACATGGGGCTTTGGTCT 17169 Query 364909 GACAGCATGAAGAACTATATCATCGCCGCTAATGGTTCTGTGCAGAACATTCCAGGATTT 364968 || |||||| ||| |||||||||| | |||||| | ||||| ||||| || Sbjct 17168 GATGCCATGAAAAACCGAATCATCGCCGAGGACGGTTCTATTCAGAATATTCCCAATATT 17109 Query 364969 CCAGAAGATCTGAAGCCTATTTACAAAACCGTATGGGAAATTTCCATGCGAACTCTCATT 365028 || | ||| | ||| || | ||||| ||||| ||||| || ||| ||| | | Sbjct 17108 CCTGCTGATGTTAAGGCTCTCTACAAGACCGTCTGGGAGATCTCCCAGCGTCAAGTGGTC 17049 Query 365029 GATATGGCGGCCGATCGCGGTGCTTTTATCTGTCAGAGCCAGTCGTTTAACGTATTCATG 365088 | ||||| ||||| || || ||||| || ||| ||| || | ||| | |||| Sbjct 17048 CAGATGGCTGCCGACCGAGGCGCTTTCATTGACCAGTCCCAATCTCTGAACATCCACATG 16989 Query 365089 ACTCAGCCAACCTCCGCCAAGCTTACATCCATGCATTTCTACGGGTGGAAATCCGGTCTT 365148 | | |||||| | |||| | || |||||| ||| || |||||| |||||| Sbjct 16988 AAGGACCCAACCATGGGCAAGATAACGAGCATGCACTTCACTGGCTGGAAACTCGGTCTC 16929 Query 365149 AAGACAGG 365156 ||||| || Sbjct 16928 AAGACCGG 16921 >seq881 Length=186784 Score = 84.2 bits (92), Expect = 6e-11 Identities = 94/122 (77%), Gaps = 4/122 (3%) Strand=Plus/Minus Query 111423 AAAATTTGGGATGGAAATGGATCACGTGACTTTCTAGATTCAGTTGGTCTTGTCGACAAC 111482 || |||||||||||||||||||| || || || || || | | ||| |||| | ||| | Sbjct 108487 AAGATTTGGGATGGAAATGGATCCCGCGAATTCCTCGA-TAACCTGGGCTTGAC-ACACC 108430 Query 111483 --GAAGAAGGTGATCTCGGACCAGTTTACGGATTTCAATGGCGCCACTTTGGTGCAGACT 111540 || || || || ||||| || |||||||| || || ||||| |||||||| ||||| | Sbjct 108429 GTGAGGAGGGCGACCTCGGCCCTGTTTACGGCTTCCAGTGGCGGCACTTTGGCGCAGAGT 108370 Query 111541 AC 111542 || Sbjct 108369 AC 108368 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303331223047880