Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calonectria_20pseudonaviculata_20[genbank_20GCA_5F001696505.1_202016 -07-28] 1,340 sequences; 51,439,042 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq1144 122 8e-23 seq907 104 2e-17 seq732 104 2e-17 seq897 86.0 6e-12 >seq1144 Length=167757 Score = 122 bits (134), Expect = 8e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | || || || | || | ||| |||||||| |||||||||||||| Sbjct 91891 CCACCACGGAGGCGGAGGACCAGGTGGAGGGTGGACTCCTTCTGAATGTTGTAATCAGAG 91832 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | || || ||||| |||||||| || ||| | || | ||||||||||||||||| Sbjct 91831 AGTGTTCGGCCATCCTCAAGCTGCTTTCCGGCGAAAATGAGTCGCTGCTGGTCCGGAGGA 91772 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 ||||| || || || ||| ||| ||| | | || | ||| |||| ||||| | Sbjct 91771 ATTCCCTCCTTATCCTGGATCTTCGACTTAACGTTGTCAATAGTGTCGGACGACTCCACC 91712 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 |||| ||||| || || || || ||||| || |||||||||||||| Sbjct 91711 TCGAGGGTAATAGTCTTGCCAGTGAGAGTCTTGACGAAAATCTGCAT 91665 Score = 113 bits (124), Expect = 4e-20 Identities = 140/189 (74%), Gaps = 2/189 (1%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | || || |||| || | ||| |||||||| || |||||||| ||| Sbjct 91379 CCACCACGGAGGCGGAGGACTAGGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCGGAG 91320 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||| || ||||| ||||||||||| || |||| | ||||||||||||||| ||| Sbjct 91319 AGGGTTCGGCCATCCTCAAGCTGCTTGCCAGCAAAGATGAGACGCTGCTGGTCCGGGGGG 91260 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTG-CTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 || ||||| ||||| ||| | | || ||||| | || | ||||||| |||||||| Sbjct 91259 ATGCCTTCCTTGTC-CTGAATCTTTGACTTGACGTTGTCGATGGTATCGGAGGACTCGAC 91201 Query 131187 GTCGACGGT 131195 |||| ||| Sbjct 91200 CTCGAGGGT 91192 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 || || || | ||| || || | || | ||| |||||||| |||||||||||||| Sbjct 92119 CCGCCACGGAGACGGAGGACAAGGTGAAGGGTGGACTCCTTCTGAATGTTGTAATCAGAG 92060 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||| || ||||| |||||||| || ||| | || | ||||||||||||||||| Sbjct 92059 AGGGTTCGGCCATCCTCAAGCTGCTTTCCGGCGAAAATGAGTCGCTGCTGGTCCGGAGGA 92000 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 ||||| || || || ||| ||| ||| | | || | ||| |||| ||||||| Sbjct 91999 ATTCCCTCCTTATCCTGGATCTTCGACTTAACGTTGTCAATAGTGTCGGATGACTCGACC 91940 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | ||||| || || || || | ||| || || || || ||||| Sbjct 91939 TCAAGGGTAATCGTCTTTCCAGTCAAAGTCTTCACAAAGATTTGCAT 91893 Score = 93.3 bits (102), Expect = 4e-14 Identities = 153/218 (70%), Gaps = 2/218 (1%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | || || || | || | ||| ||||| || || || ||||| ||| Sbjct 91663 CCACCACGGAGGCGGAGGACCAGGTGGAGGGTAGACTCTTTCTGGATATTGTAGTCGGAA 91604 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||| || ||||| ||||||||||| || |||| | ||||||||||||||| ||| Sbjct 91603 AGGGTTCGGCCATCCTCAAGCTGCTTGCCAGCAAAGATGAGACGCTGCTGGTCCGGGGGG 91544 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTG-CTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 || ||||| ||||| ||| | | || ||| | | || | ||||| | ||||||| Sbjct 91543 ATGCCTTCCTTGTC-CTGAATCTTTGACTTAACGTTGTCGATGGTATCAGAAGACTCGAC 91485 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGA 131224 |||| || | ||| || || || || || || |||| Sbjct 91484 CTCGAGAGTGATGGTCTTGCCAGTGAGGGTCTTGACGA 91447 >seq907 Length=75695 Score = 104 bits (114), Expect = 2e-17 Identities = 594/941 (63%), Gaps = 28/941 (3%) Strand=Plus/Plus Query 145058 TTGACGACCTGAAACTCGCCGGCCAACACACGACGCAAATACACGTTAGACGTGAAGGGT 145117 ||||||||||| ||||| || ||||| |||||||| | || | ||| || ||| | || Sbjct 17212 TTGACGACCTGGAACTCACCAGCCAAGACACGACGTGAGTATATGTTGGATGTGTAAGGC 17271 Query 145118 TCAAAAGACTCGTTATTGCCCAGGATTTGAGCGGTCGTTGCGGTGGGCATGTACGCCACC 145177 || ||| | ||||| || |||| || |||| ||| | || || |||||| ||||| Sbjct 17272 TCGAAACATTCGTTGTTACCCAAAATCTGAGAGGTACTGGCAGTAGGCATGGGCGCCATG 17331 Query 145178 A--ATAATGAATTGCGCAGGCCGTGCTTCTTGATGTCTTCCTTTAGCGTACCCCAATCCC 145235 | | | || || || | |||||||| ||||| | || || | |||| |||| Sbjct 17332 AGCAGACTG--TTACGGATGCCGTGCTCCTTGACCTGCTCACGGAGGGATTCCCAGTCCC 17389 Query 145236 ATAGCGAAGTCGGCCTCACGTCCCACATGTCGTACTGCAAAATGCCCTCGCTGGCGGGGC 145295 | || | || |||| | |||||||||| |||| | ||| ||||| || ||| Sbjct 17390 AGAGGTCTGATGGTTTCACATTCCACATGTCGAACTGGAGAATACCCTCAGAGGTAGGGG 17449 Query 145296 TGCCTTGAAAGGAACTGTAACTGCCCCAAGTTTTGGCGAGCTCGCAACT--CGCCTCCAG 145353 ||| | |||| | ||| ||| |||| |||| | ||| || ||| Sbjct 17450 AGCCCTTGAAGGTAGAGTAGGGACCCTCCTCCTTGGACAGCTGG--ACTGAGGCAGTCAG 17507 Query 145354 AGCGCCGAAATAAATTGTCTCGGCAATTTGCCTGTTGAG--CAGCATCGCTTCATCGCTC 145411 ||| || ||| || || || || || |||| || || | ||||| | | Sbjct 17508 GGCGGCGTGATAGATAGTTTCAAAGATCTGTTTGTTCAGTTCACGA--GCTTCGGGGGAC 17565 Query 145412 TCGTACGGCATGCGCAGCAGTACAAAAGCATCGGCGAGCCCCTGTATTCCCACGCCGATG 145471 ||| | |||||||| || | || ||||| || || ||||| | || || || ||| Sbjct 17566 TCGAAAGGCATGCGGAGGGCAAGGAATGCATCCGCAAGACCCTGGACACCAACACCAATG 17625 Query 145472 GGCCGATGTTTCATGTTGCTCATCCTCGCCGACTCGATAGGATATCGATTACGGTCGATA 145531 || || || ||||||||| | | ||| || | |||||| | || ||| || Sbjct 17626 GGTCGGTGACGCATGTTGCTGTTACGAGCCTCCTGAACAGGATAGTGGTTGACGTCAATG 17685 Query 145532 ATTTTATTCAAGTTTCGCACTACTACCTTTGTAATGTGCCGCAACTTTTCAAAGTCAAAC 145591 || || || | ||| || || || || || | | ||| |||| |||||| | Sbjct 17686 ATCTTGTTAAGGTTGCGAACGACAGTCTGAGTGACATCGTGCAGTTTTTGGAAGTCATAG 17745 Query 145592 CGAGCCTCGTCAACGACCACACAGCTATTGACGGCGATCGACGCCAAATTACAAACTGCC 145651 | | | | | | | ||| | | | ||| | || || | || || || || Sbjct 17746 CAATCATTGCTGTAGTCAACAAAAGAAGGAAGGGCCAGGGAAGCGAGGTTGCAGACGGCG 17805 Query 145652 GTCTCCTCGGCGTCGCTGTATTGTACGATCTCGGCGCACAAATTGCTACATTTGATGGTT 145711 ||| || | ||||||||| | |||||| | ||| | ||| || ||| || Sbjct 17806 ACCTCATCAGGAGCGCTGTATTCGATGATCTCAGTGCAAAGGTTGGAACTGCGGATAGTA 17865 Query 145712 CCCAGATTTTGCTGATTACTTTTCCTGTTGCACGCG-TCCTTGTAGAGCATGTACGGTCC 145770 || || || | ||| ||||| || | |||| || | |||||||| |||||| | || Sbjct 17866 CCGAGGTTCTTCTGGTTACTCTTGCGGTTG-GCGTGATCCTTGTAAAGCATGAAGGGGTT 17924 Query 145771 GCCAGTCTCCACCTGCGTCTCCACGATAAAACGGTGCAAGTCCT-----GC--GCACGCA 145823 |||||| || ||| | || ||| || || | || || || || | Sbjct 17925 GCCAGTTTCGGTCTGAG---CCTCGAGAATGGCGTACCAGAGCTTTTGGGCCTTCATGGT 17981 Query 145824 CCTGCTGCTGGTAGCGGCCCTCTTCTTCGTATTTCCTGTAGAGCTCCTCAAACGCGGAAC 145883 | ||| | | ||||| || ||||| || |||||| |||||||| | | Sbjct 17982 CTTGCGACCTTTGCCGGCCTTC----TCGTAGCTCTCGTAGAGAGCCTCAAACTCATCGC 18037 Query 145884 CGTAGCAATCGGACAGGCCGGGACACTTGTTGGGACACATCAGCGACCATACGCCGTTGG 145943 | ||||| || | || || || |||| |||||||||||| || | ||| ||||||| Sbjct 18038 CATAGCAGTCAGCAAGACCAGGGCACTCGTTGGGACACATTAGAGTCCAGTCGCCGTTCT 18097 Query 145944 CGTTGACGCGCTCCATAAACAAATCTGGCACCCACAGCGCG 145984 | || |||| ||| |||||||| || | |||||| ||| Sbjct 18098 TCTCCACACGCTTCATGAACAAATCGGGGATCCACAGAGCG 18138 >seq732 Length=233276 Score = 104 bits (114), Expect = 2e-17 Identities = 138/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 131043 CTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTA 131102 |||||| || |||||||| ||||||| |||||| ||||| |||||||| || || | Sbjct 60378 CTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTACCAGCAAA 60437 Query 131103 GATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTG 131162 ||| | |||||||||||||| || || || || ||||| ||| || ||||| | Sbjct 60438 GATAAGTCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTT 60497 Query 131163 CTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTAC 131222 || | || |||| ||||| | || | ||| | || || || || || || || || Sbjct 60498 GTCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATCGTCTTCCCCGTGAGGGTCTTGAC 60557 Query 131223 GAAAATCTGCAT 131234 ||| |||||||| Sbjct 60558 GAAGATCTGCAT 60569 >seq897 Length=151945 Score = 86.0 bits (94), Expect = 6e-12 Identities = 128/182 (70%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 131045 CCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGA 131104 |||| || |||||||| ||| | |||||| ||||| || |||||||| || ||| Sbjct 73703 CCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCCTCGAGTTGCTTGCCAGCAAAGA 73644 Query 131105 TTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCT 131164 | | |||||||||||||| || || || || ||||| ||| || ||||| | | Sbjct 73643 TCAGGCGCTGCTGGTCCGGGGGAATACCCTCCTTGTCCTGGATCTTGGACTTGACATTGT 73584 Query 131165 CCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGA 131224 | | || || | |||||||| || | ||| | ||| || || || || || || |||| Sbjct 73583 CGATGGTGTCCGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTGAGGGTCTTCACGA 73524 Query 131225 AA 131226 || Sbjct 73523 AA 73522 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 472004893785600