Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Calonectria_20pseudonaviculata_20[genbank_20GCA_5F001696505.1_202016
-07-28] 1,340 sequences; 51,439,042 total letters
Query= NC_008293.1
Length=135454
Score E
Sequences producing significant alignments: (Bits) Value
seq1144 91.5 1e-13
>seq1144
Length=167757
Score = 91.5 bits (100), Expect = 1e-13
Identities = 142/203 (70%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
|||||||| ||||| ||||||||||| || || | || || | || || ||||| ||
Sbjct 91893 ATGCAAATCTTTGTGAAGACTTTGACTGGAAAGACGATTACCCTTGAGGTCGAGTCATCC 91952
Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118
|||||||| || | ||| || ||| || || || || ||||| || |||||
Sbjct 91953 GACACTATTGACAACGTTAAGTCGAAGATCCAGGATAAGGAGGGAATTCCTCCGGACCAG 92012
Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178
||||| | ||||| ||||| || || | || |||| || || | ||||||||
Sbjct 92013 CAGCGACTCATTTTCGCCGGAAAGCAGCTTGAGGATGGCCGAACCCTCTCTGATTACAAC 92072
Query 25179 ATTCAAAAAGAATCCACGCTACA 25201
||||| || || ||||| || ||
Sbjct 92073 ATTCAGAAGGAGTCCACCCTTCA 92095
Score = 87.8 bits (96), Expect = 2e-12
Identities = 141/203 (69%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
||||| || || || |||||| | || || || | || || |||| |||||||||||
Sbjct 91665 ATGCAGATTTTCGTCAAGACTCTCACTGGCAAGACTATTACCCTCGAGGTGGAGTCGTCC 91724
Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118
|||||||| || | ||| || ||| || || || || ||||| || |||||
Sbjct 91725 GACACTATTGACAACGTTAAGTCGAAGATCCAGGATAAGGAGGGAATTCCTCCGGACCAG 91784
Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178
||||| | ||||| ||||| || || | || |||| || || | ||||||||
Sbjct 91785 CAGCGACTCATTTTCGCCGGAAAGCAGCTTGAGGATGGCCGAACACTCTCTGATTACAAC 91844
Query 25179 ATTCAAAAAGAATCCACGCTACA 25201
||||| || || ||||| || ||
Sbjct 91845 ATTCAGAAGGAGTCCACCCTCCA 91867
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433320923212100
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |