Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calonectria_20pseudonaviculata_20[genbank_20GCA_5F001696505.1_202016 -07-28] 1,340 sequences; 51,439,042 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq1144 114 1e-20 seq732 107 2e-18 seq897 104 2e-17 >seq1144 Length=167757 Score = 114 bits (126), Expect = 1e-20 Identities = 144/198 (73%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||| ||||| || ||||| || || || ||| | || ||||| || || | || Sbjct 91893 ATGCAAATCTTTGTGAAGACTTTGACTGGAAAGACGATTACCCTTGAGGTCGAGTCATCC 91952 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | ||| | | || || || || || |||||||| ||||| || || || Sbjct 91953 GACACTATTGACAACGTTAAGTCGAAGATCCAGGATAAGGAGGGAATTCCTCCGGACCAG 92012 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || || || || || ||||| || ||| | |||||| ||| ||| |||| ||||||||| Sbjct 92013 CAGCGACTCATTTTCGCCGGAAAGCAGCTTGAGGATGGCCGAACCCTCTCTGATTACAAC 92072 Query 22399 ATTCAAAAAGAATCCACC 22416 ||||| || || |||||| Sbjct 92073 ATTCAGAAGGAGTCCACC 92090 Score = 96.9 bits (106), Expect = 3e-15 Identities = 140/198 (71%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| ||||| || || ||| | || || || || | || || || ||||| | || Sbjct 91665 ATGCAGATTTTCGTCAAGACTCTCACTGGCAAGACTATTACCCTCGAGGTGGAGTCGTCC 91724 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | ||| | | || || || || || |||||||| ||||| || || || Sbjct 91725 GACACTATTGACAACGTTAAGTCGAAGATCCAGGATAAGGAGGGAATTCCTCCGGACCAG 91784 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || || || || || ||||| || ||| | |||||| ||| || |||| ||||||||| Sbjct 91785 CAGCGACTCATTTTCGCCGGAAAGCAGCTTGAGGATGGCCGAACACTCTCTGATTACAAC 91844 Query 22399 ATTCAAAAAGAATCCACC 22416 ||||| || || |||||| Sbjct 91845 ATTCAGAAGGAGTCCACC 91862 >seq732 Length=233276 Score = 107 bits (118), Expect = 2e-18 Identities = 140/194 (72%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 22216 AAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACC 22275 |||||||| || || || || || | || || || ||| |||| ||||| ||||| | Sbjct 60572 AAGATGCAGATCTTCGTCAAGACCCTCACGGGGAAGACGATCACCCTTGAGGTGGAGTCT 60513 Query 22276 ACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGAT 22335 |||| ||| | ||| | |||| || || || ||||||||||| ||||| || || Sbjct 60512 TCCGACACCATCGACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGCATTCCCCCGGAC 60453 Query 22336 CAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTAC 22395 || || || ||||| ||||| || || ||| | |||||| ||||||| | ||| ||| Sbjct 60452 CAGCAGCGACTTATCTTTGCTGGTAAGCAGCTCGAGGATGGCCGCACCCTGAGCGACTAC 60393 Query 22396 AACATTCAAAAAGA 22409 ||||| || || || Sbjct 60392 AACATCCAGAAGGA 60379 >seq897 Length=151945 Score = 104 bits (114), Expect = 2e-17 Identities = 131/180 (73%), Gaps = 0/180 (0%) Strand=Plus/Plus Query 22227 TTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGT 22286 ||| || || || | || || || || |||| ||||| || || || | || ||| | Sbjct 73522 TTTCGTGAAGACCCTCACGGGCAAGACCATCACCCTTGAGGTCGAGTCCTCGGACACCAT 73581 Query 22287 GGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCT 22346 ||| || |||| || || || ||||||||||||||||| || || || || || || Sbjct 73582 CGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGTATTCCCCCGGACCAGCAGCGCCT 73641 Query 22347 TATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAA 22406 || ||||| ||||| || | |||||| ||||||| ||||||| |||||||| || || Sbjct 73642 GATCTTTGCTGGCAAGCAACTCGAGGATGGCCGCACCCTCTCCGACTACAACATCCAGAA 73701 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419721145317100