Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Calonectria_20pseudonaviculata_20[genbank_20GCA_5F001696505.1_202016
-07-28] 1,340 sequences; 51,439,042 total letters
Query= NC_008603.1
Length=321240
Score E
Sequences producing significant alignments: (Bits) Value
seq761 118 2e-21
seq1157 105 1e-17
seq541 91.5 3e-13
seq712 87.8 4e-12
>seq761
Length=101766
Score = 118 bits (130), Expect = 2e-21
Identities = 433/667 (65%), Gaps = 21/667 (3%)
Strand=Plus/Minus
Query 279706 TGTCGGGTGGTTGGAAGATGAAGCTGGCCCTCACTCGCGCCATTCTACTGCGTGCCGATG 279765
|||| |||||||||||||||||| |||| || | || || || || | ||| || || |
Sbjct 93834 TGTCTGGTGGTTGGAAGATGAAGTTGGCTCTGGCCCGAGCTATGCTGCAGCGCGCTGACG 93775
Query 279766 TCCTACTGCTTGATGAGCCAACCAACCACATGGACACCACCAACGTAGCCTGGCTAGTGT 279825
| || || || || || || |||||||| | ||| |||| | || ||||| | |
Sbjct 93774 TTCTCCTACTGGACGAACCTACCAACCATCTTGACGTTGACAACATTGCTTGGCTCGAGA 93715
Query 279826 CCTACCTAACCAGTCTGAAGAATGTTTCTTCCC-----TCATTGTCTCTCACGACTCTGG 279880
|||||||| |||| | | || | || | | ||||| || |||||||||||
Sbjct 93714 ACTACCTAA--AGTC-GCACCCTGA--CATCACCAGTTTGATTGTTTCCCACGACTCTGG 93660
Query 279881 CTTCCTAGATGCCGTGTGCTCTGCCATCATTCACTATGAGCAAAATCTGAAGCTCTCCAA 279940
||| | || || | | | |||| ||||| |||| || |||||| |
Sbjct 93659 TTTCTTGGACAATGTCACCACCGACATCTACCACTACGAGCCTAACAAGAAGCTGGCTTG 93600
Query 279941 GCACATCGGCAACCTGTCTGCTTTCGTGGCAAAGCGCCCTGAGGCGGCCGCCTACTATGA 280000
||| ||||||||| |||| || || | ||||| ||||| ||||||
Sbjct 93599 CTACAAGGGCAACCTGGCTGCCTTTGTCGAGCTCCGCCCCGAGGCCAAGAGCTACTACAC 93540
Query 280001 CCTGAAGGACGCCACCGCCAAGTGGGAATTCCCTGAGCCAGGGTTTCTGGAGGGCATCAC 280060
||| | |||||| | ||| | |||||| || || ||||| || |||
Sbjct 93539 TCTGTCCGCTTCCACCGTCCAGTTCAAGTTCCCTCCTCCTGGAATTCTGACTGGTGTCAA 93480
Query 280061 ATCAAAGGATCGCGCAATCAT--GAAGCTCCGTGGCGTCTCCTTTGCTTATCCCAATGGC 280118
|| | ||| || ||||| ||| || ||| || ||| ||| ||||||| |
Sbjct 93479 GTCGCAAACTCGAGCCATCATCCGAATGACCAA--CGTGTCATTTAGTTACCCCAATGCC 93422
Query 280119 CCCAACATCTTCAG---CAG-TGTCAACTCGCAGGTTTCTATGAACTCACGGATTGGTGT 280174
||||| ||||| | | |||| | ||| | || || || || ||| |
Sbjct 93421 CCCAAGC-CTTCACTCTCGGATGTCTCTTGCCAGCTCTCCCTGTCTTCTCGTGTTGCCAT 93363
Query 280175 CATTGGACCCAATGGTGCGGGTAAGTCTACCCTAATCAAAGTCCTGACTGGCGAGACCCA 280234
|||||| ||||| ||||| || ||||| ||||| || || | || ||||| |||||
Sbjct 93362 CATTGGCCCCAACGGTGCTGGAAAGTCGACCCTTATTAAGCTACTTACTGGTGAGACTAT 93303
Query 280235 GGCCACTGAGGGGTCCGTTTG-GAAGCATCCCAACATGCGGATGGCTTACGTCGCTCAGC 280293
|| | || || | | | ||||||||||||| |||| || | ||| || || |
Sbjct 93302 TCCCTCC-AGCGGCAAGGTCGAGAAGCATCCCAACTTGCGTATCGGCTACATCAAGCAAC 93244
Query 280294 ACGCTTTCCACCACATCGAGAACCACCTGGACATGACTCCTAACCAATACATTCAGTGGC 280353
||||| | | || | |||| ||| |||| | |||||| ||||| ||| |||||||||
Sbjct 93243 ACGCTCTGGAACATGTTGAGATGCACTTGGAGAAGACTCCAAACCAGTACCTTCAGTGGC 93184
Query 280354 GCTATGC 280360
| |||||
Sbjct 93183 GATATGC 93177
>seq1157
Length=14967
Score = 105 bits (116), Expect = 1e-17
Identities = 154/215 (72%), Gaps = 2/215 (1%)
Strand=Plus/Minus
Query 251541 TTGATATTCAGATACACGGCGTTCGAAGAAATTAGACTTGCCCTCCAGAGAGATTAGCTC 251600
||| || ||| |||||| || ||||| |||| ||| || | || ||||| |||
Sbjct 11149 TTGGTAATCACCTACACGCTTCTCAAAGAAGTTAGTCTTACCACCGAGGGAGATATTCTC 11090
Query 251601 CATGAAGTCGAAGGGGTTTGTGGCATTGTACTGCTTGGGATGGCCAAGTGCTACGAAGAT 251660
|||||||||||||||||| || | ||||| ||| | ||||| || || ||||
Sbjct 11089 CATGAAGTCGAAGGGGTTGGTAGACTTGTAGACCTTCTCGTTACCAAGAGCGAC-AAGAA 11031
Query 251661 G-CGGTCTGCCACAAACTCCAGATACTGTCCCATCAGTTCAGAGTTCATGCCAATCATAC 251719
| ||||| || || ||||| | ||||| ||| || || |||||||| |||| || |
Sbjct 11030 GACGGTCGGCAACGAACTCGATGTACTGCTTCATAAGATCCGAGTTCATACCAAGCAGAG 10971
Query 251720 GACAAGGAATTGCCTCACAGATGAATTCCTTTTCG 251754
|||||| | |||||| | |||||||||||||
Sbjct 10970 CACAAGGCAATGCCTCGGTCAGGAATTCCTTTTCG 10936
>seq541
Length=473379
Score = 91.5 bits (100), Expect = 3e-13
Identities = 155/222 (70%), Gaps = 2/222 (1%)
Strand=Plus/Minus
Query 279345 GGTGAGGATCTGTGTGACTGTGATTTCTCGCTCGCATATGGTGGGAAGATTCTGCTAAAC 279404
||||||||||| || ||||| ||||| || || || |||| |||||||| || |||
Sbjct 247509 GGTGAGGATCTCTGCAACTGTACCTTCTCTCTTGCCTACGGTGCCAAGATTCTTCTCAAC 247450
Query 279405 TCTACCCGCCTCAACATCAAGCGTGGCAACCGGTATGGTCTCATCGGTCCCAATGGAGCG 279464
|| | |||| | |||||||| | || || ||||| ||||||||| || |
Sbjct 247449 CAGACTCACCTCCGTCTTAAGCGTGGTCAGCGCTACGGTCTTTGCGGTCCCAACGGTTCC 247390
Query 279465 GGTAAGAGCACTCTAATGCGCGCCATTGCAAACGGTCAGCTGGAAGGATTTCCTAACGCA 279524
|| ||| ||| || ||||||||||| |||| ||| | | ||| ||||| | |||
Sbjct 247389 GGAAAGTCCACCCTCATGCGCGCCATCAACAACGAGCAGGTCG-AGGGTTTCCCCAAGCA 247331
Query 279525 -TCTGAGGTAAGGACAGTGTATGTAGAGCACGACATCGACTC 279565
||||| | ||| || | || ||||||||| | |||||
Sbjct 247330 GAGCGAGGTCAAGACCGTCTTCGTCGAGCACGACCTGGACTC 247289
>seq712
Length=126004
Score = 87.8 bits (96), Expect = 4e-12
Identities = 90/118 (76%), Gaps = 0/118 (0%)
Strand=Plus/Plus
Query 216937 TATATTCCCGAGATGATCTTTGGGCATCTTTTGTCTGGCGAGAACTTTGATGATACAGAG 216996
|||||||| ||| | || ||||| ||||| ||| |||| ||||||||||| || |||
Sbjct 102636 TATATTCCAGAGCTCATTTTTGGACATCTGTTGGCTGGTTCCAACTTTGATGACACCGAG 102695
Query 216997 GAGCGCACCGGAGCTGGTCGCAATGGCTATGGTTCCAAGCTCACCAACATCTTCAGCA 217054
|| | || | | |||||| ||||| |||||| |||||||| ||| | |||||||
Sbjct 102696 AAGAGAACAGTTGGTGGTCGAAATGGTTATGGTGCCAAGCTCTGTAACGTTTTCAGCA 102753
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1027819153326940
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |