Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Calonectria_20pseudonaviculata_20[genbank_20GCA_5F001696505.1_202016
-07-28] 1,340 sequences; 51,439,042 total letters
Query= NC_009127.1
Length=295146
Score E
Sequences producing significant alignments: (Bits) Value
seq907 257 3e-63
seq1157 138 2e-27
>seq907
Length=75695
Score = 257 bits (284), Expect = 3e-63
Identities = 876/1348 (65%), Gaps = 53/1348 (4%)
Strand=Plus/Plus
Query 244090 GTTCACCACCTGAAACTCTCCCGACAGCACGCGGCGCTGGTAGAGGTTGCTGCTGAGCGG 244149
||| || ||||| ||||| || | || || || || ||| | |||| || ||
Sbjct 17211 GTTGACGACCTGGAACTCACCAGCCAAGACACGACGTGAGTATATGTTGGATGTGTAAGG 17270
Query 244150 CTCGATGCTCTCCGTGTTGCCCAGTATCTGCGCCGTGCTCGCAGTCGGCATGGGCGACAC 244209
||||| | || |||| |||| ||||| | || || ||||| |||||||||| ||
Sbjct 17271 CTCGAAACATTCGTTGTTACCCAAAATCTGAGAGGTACTGGCAGTAGGCATGGGCGCCAT 17330
Query 244210 CAGCAGACTGTTCCTCACGCCGTGCCTCTGGA--TGCGGAGTCTGAGCTCGTTCCAGTCC 244267
||||||||||| | | ||||||| || || ||| | | ||| | |||||||
Sbjct 17331 GAGCAGACTGTTACGGATGCCGTGCTCCTTGACCTGCTCA--CGGAGGGATTCCCAGTCC 17388
Query 244268 CACATGCCCGAGAGGTCCTCGCGTTTGAGGCCCCACATGTCAAACTGCAGCAGCCCCTTG 244327
|| | | | || | | || | || ||||||||| ||||| || | ||||
Sbjct 17389 CAGAGGTCTGATGGTT--TCACATT-------CCACATGTCGAACTGGAGAATACCCT-- 17437
Query 244328 CTGACG--GGGCTGCCCTCGTAGGTCGGGTAGGGACCGTCGCGCTGGGCCAGCTT-ACAG 244384
| || | ||| ||||| | |||| | ||||||||| || || || ||||| || |
Sbjct 17438 CAGAGGTAGGGGAGCCCTTGAAGGTAGAGTAGGGACCCTCCTCCTTGGACAGCTGGACTG 17497
Query 244385 CTCTCGTCGAGGGCGGCGTAGTAGATGGTCTCGAAGATCATCTTGTTCATGTCGCGGGCC 244444
||| |||||||||| ||||| || || |||||| ||||||| || || ||
Sbjct 17498 AGGCAGTC-AGGGCGGCGTGATAGATAGTTTCAAAGATCTGTTTGTTCAGTTCACGAGCT 17556
Query 244445 TTGCCGCAGGTGAAGGGGATGCCCATCATCATGAAGACGTCGGCCAGTCCCTGCACGCCG 244504
| | | | ||| || |||| | | ||| | || || || ||||| || ||
Sbjct 17557 TCGGGGGACTCGAAAGGCATGCGGAGGGCAAGGAATGCATCCGCAAGACCCTGGACACCA 17616
Query 244505 ATGCCGATGGGTCTGTGTCGCTTGTTGGAGCGCATGGCTTCGGGCACGGGGTAAAAGTTG 244564
| || ||||||| ||| ||| ||||| | || || | || || || ||||
Sbjct 17617 ACACCAATGGGTCGGTGACGCATGTTGCTGTTACGAGCCTCCTGAACAGGATAGTGGTTG 17676
Query 244565 CCGTCGATCACCTTGTTGAGGTTGCGGGTGATCATGCGGAC-GACGTCGGCCAGCAGCTG 244623
|||| || | |||||| |||||||| || || | || ||| ||| ||| ||
Sbjct 17677 ACGTCAATGATCTTGTTAAGGTTGCGAACGA-CAGTCTGAGTGACATCGTGCAGTTTTTG 17735
Query 244624 AAAGTCGTACTCGTAGGGATCCTCGGCGATGGTGATCCTCACAAACTCGTTGAGGGCGAC 244683
||||| || | ||| | | | | || | ||||| ||||| |
Sbjct 17736 GAAGTCATA------GCAATCATTGCTG-TAGTCA-----ACAAAAGAAGGAAGGGCCAG 17783
Query 244684 GCTGGCCAGGTTGCAGACGGCCACCTCCTCCGAGTTGGTGTACTGGACAATCTCGGTGCA 244743
| || |||||||||||||| ||||| || | | |||| | || ||||| |||||
Sbjct 17784 GGAAGCGAGGTTGCAGACGGCGACCTCATCAGGAGCGCTGTATTCGATGATCTCAGTGCA 17843
Query 244744 GAGGTT---ACTGCACTTGATGGTGCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGC 244800
||||| ||||| ||| || || |||| || || || |||| |||| |
Sbjct 17844 AAGGTTGGAACTGC---GGATAGTACCGAGGTTCTTCTGGTTACTCTTGCGGTTGGCGTG 17900
Query 244801 GTCCTTGTAGAGCATGAAGGGCCCCCCGGTCTCGAGCTGGGCGACGAGGACGCTGTTCCA 244860
|||||||| ||||||||||| || || ||| ||| || |||| | | || |||
Sbjct 17901 ATCCTTGTAAAGCATGAAGGGGTTGCCAGTTTCGGTCTGAGCCTCGAGAATGGCGTACCA 17960
Query 244861 GAGGTCCCTAGCCTTGACCGTCCTGCGAGCCTTGCCCTCTGCCTCGTAGCGGGTGTACAG 244920
||| | ||||| | ||| ||||| | ||||| | |||||||| ||| ||
Sbjct 17961 GAGCTTTTGGGCCTTCATGGTCTTGCGACCTTTGCCGGCCTTCTCGTAGCTCTCGTAGAG 18020
Query 244921 GGCCTCGAACTCGGGGCCCCAGACCTCGTCTAGGCCGGGGCACGACGCCGGG-CACATGA 244979
||||| ||||| ||| || || | || || |||||| || ||| ||||| |
Sbjct 18021 AGCCTCAAACTCATCGCCATAGCAGTCAGCAAGACCAGGGCAC-TCGTTGGGACACATTA 18079
Query 244980 GACTCCACTCGCCGCCGTCCTTGACCCTCTGCATGAAGAGGTCGGGGATCCAGAGGGCCT 245039
|| |||| |||||| | || || | || |||||| | ||||||||||| || ||
Sbjct 18080 GAGTCCAGTCGCCGTTCTTCTCCACACGCTTCATGAACAAATCGGGGATCCACAGAGCGA 18139
Query 245040 GGAAGAGGTCCCTGGTCCTCTGCTCGTCCGAGCCAGTGTTCTTCCTCAGCTCCAAAAAGT 245099
|||| ||||| | | | ||| ||| ||| |||||| | || |||| ||| |
Sbjct 18140 GGAACAGGTCACGAGCACGGACCTCCTCCTTTCCATGGTTCTTGCGAAGATCCAGAAATT 18199
Query 245100 CAAAGACGTCGACGTGCCAGGGCTCCATGTAGACAGCGAGGGCGCCGGGCCGCTTGTTGC 245159
| || |||||| ||||||| ||||| | ||||| |||| || ||||| ||||||||||
Sbjct 18200 CGAATACGTCGGCGTGCCAAGGCTCGAGGTAGATGGCGAAAGCACCGGGTCGCTTGTTGC 18259
Query 245160 CTCCCTGGTCCACCATCCTCTCGAGC----GCGTTGAAGATGCGCAGGGTAGGCACTATG 245215
| ||||| | || | | |||||| |||||| | || || | || |
Sbjct 18260 CACCCTG----ATCAACATATCGAGCAGTGTTGTTGAATACACGGAGCATGGGTGTCACA 18315
Query 245216 CCGTTAGAGTGGCCGTTGGTGCCCTTGATGTAGGCGCCCTTGCCCCTG--AGGTTGCTGA 245273
||||| ||| |||||||| || || || | ||| || | | | | | ||
Sbjct 18316 CCGTTGGAGGTACCGTTGGTACCGGCAATATAAGAGCCAGTGGCACGGATACGGTGAACG 18375
Query 245274 TGGACATGCCTAGTCCGCCGGCGTGCTTGGAGATGAGGGCGCAGCTCTTGATGGTGTCTG 245333
| || | || | || || || |||||||| | ||| ||| |||||| ||||||
Sbjct 18376 TTGAGA--CCGATGCCACCAGCCATTTTGGAGATCATGGCACAGGTCTTGAGGGTGTCAT 18433
Query 245334 CTATGCCCTCCATGCTGTCCGACTTCATGTTGAGCAGAAAGCAGGAGGACAGCTGGGGCT 245393
|| ||||| || |||||| |||||||| || ||| ||||| || |||||||||||||
Sbjct 18434 AAATACCCTCAATACTGTCCTCCTTCATGTCGACCAGGAAGCATGAAGACAGCTGGGGCT 18493
Query 245394 TGGGGCTGCACGAGTTGAACAGAGTGGG 245421
|| | | | |||||| || |||||
Sbjct 18494 GAGGAGTACCAGCGTTGAAGAGTGTGGG 18521
>seq1157
Length=14967
Score = 138 bits (152), Expect = 2e-27
Identities = 349/517 (68%), Gaps = 13/517 (3%)
Strand=Plus/Plus
Query 42633 CCCTGCATCAAGAAGAAGGCGGACTGGGCGCTCAACTGGATCGAGAGTCCCG-ACGCAAC 42691
|| ||||||||||| ||||| || ||||| |||| |||||| | | | | | || ||
Sbjct 10640 CCGTGCATCAAGAAAAAGGCAGAGTGGGCCCTCAGGTGGATCTCG-GACAAGCAGGCCAC 10698
Query 42692 GTTCGGCGAGAGGCTGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTT 42751
|| | | | || || || || | || |||||||| || || ||| || || ||
Sbjct 10699 CTTTGCTCAACGTCTCGTTGCATTCGCTGCTGTCGAGGGTATATTTTTCAGCGGTGCATT 10758
Query 42752 CGCCTCCATCTTCTGGCTCAAGCAG-AAGGTGTCGATGCCCGGACTCACCTTCTCGAACG 42810
||| || ||||||||| | ||| || |||| | ||||| || | |||||||| || |
Sbjct 10759 CGCTTCTATCTTCTGGTTGAAGAAGCGAGGTCT-TATGCCTGGTTTAACCTTCTCTAATG 10817
Query 42811 AACTCATCAGCAGGGACGAGGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCC 42870
| |||||| | || ||||| || || | ||||| || ||||| || ||| |
Sbjct 10818 AGCTCATCTCTCGTGATGAGGGTCTTCACACTGACTTCGCATGCCTTCTTCACTC---TC 10874
Query 42871 ACCTC-AGGCACAAGCCCTCGAAGGAGCGGGTCCGGGCCATCATCACGGAGGCCGTGGAG 42929
| ||| ||| | ||| | ||| || | | || |||||| || || |||||
Sbjct 10875 ATCTCAAGGGCCGTGCCAGC-AAGCAGGTAATTCAGGACATCATTACTGATGCCGTCTCT 10933
Query 42930 ATCGAGAAGGAGTTCCTCACGCAGTCGCTGCC-CGTGTCCCTGGTCGGCATGAACCACGA 42988
||||| ||||| ||||| || || | |||| ||| | ||| | || |||||| ||
Sbjct 10934 ATCGAAAAGGAATTCCTGACCGAGGCATTGCCTTGTG-CTCTGCTTGGTATGAACTCGGA 10992
Query 42989 CCTCATGTGCAAGTACATCCAGTACGTCGCCGACCATC-TCCTGTGCCAGATGGGTCTCA 43047
|| ||| |||||||| ||| ||| ||||||| || || ||| | ||| |
Sbjct 10993 TCTTATGAAGCAGTACATCGAGTTCGTTGCCGACCGTCTTCTTGTCGCTCTTGGTAACGA 11052
Query 43048 GCCGCCTCTACAACACGCCGTGCCCCTTCGACTTTATGGAGAACATCTCGTTGGAGGGCA 43107
| | ||||||| | | |||||||||||| |||||||| ||||| | | || |
Sbjct 11053 GAAG-GTCTACAAGTCTACCAACCCCTTCGACTTCATGGAGAATATCTCCCTCGGTGGTA 11111
Query 43108 AGACCAACTTTTTCGAGAAGCGCGTCGCCGACTACCA 43144
|||| ||||| || |||||||| || | || |||||
Sbjct 11112 AGACTAACTTCTTTGAGAAGCGTGTAGGTGATTACCA 11148
Score = 116 bits (128), Expect = 7e-21
Identities = 182/259 (70%), Gaps = 5/259 (2%)
Strand=Plus/Plus
Query 42300 ATCTGGTCCATGTACAAGAAGGCGCAGTTCTCCAACTGGACCGCCGAGGAGATTGACCTG 42359
|||||| |||||||||||| || ||| ||||||||||||||| ||||| ||
Sbjct 10253 ATCTGGCAGATGTACAAGAAGCACGAGGCTTCCTTCTGGACCGCCGAGGAAATTGATCTT 10312
Query 42360 GCCAAGGACACGGCCGGCTGGGAGTCACTGTCTGAGAAC----GAAAAGTTTTTCCTCAA 42415
||||||| | || |||| | | || | ||| | || |||| ||| ||
Sbjct 10313 TCCAAGGATCTGCACGACTGGAA-TAACCGCTTGAATGCAGATGAGCAGTTCTTCGTCTC 10371
Query 42416 AAACATACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCAG 42475
|||| || || ||||||||||| ||||| || || || ||||| ||||||| | ||
Sbjct 10372 TCACATTCTCGCTTTCTTCGCCGCATCTGATGGTATTGTGAATGAAAACCTGGTCGAGAG 10431
Query 42476 GTTCATGAAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCAT 42535
||||| ||||| ||| | |||||| || ||||||||||| |||||||| ||
Sbjct 10432 GTTCAGTGCCGAGGTCCAGATCCCTGAGGCTCGTTGCTTCTACGGTTTCCAGATCATGAT 10491
Query 42536 AGAGAACGTGCACTCTGAG 42554
|||||| | ||||| |||
Sbjct 10492 GGAGAACATCCACTCAGAG 10510
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 944323382318400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |