Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calonectria_20pseudonaviculata_20[genbank_20GCA_5F001696505.1_202016 -07-28] 1,340 sequences; 51,439,042 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq907 257 3e-63 seq1157 138 2e-27 >seq907 Length=75695 Score = 257 bits (284), Expect = 3e-63 Identities = 876/1348 (65%), Gaps = 53/1348 (4%) Strand=Plus/Plus Query 244090 GTTCACCACCTGAAACTCTCCCGACAGCACGCGGCGCTGGTAGAGGTTGCTGCTGAGCGG 244149 ||| || ||||| ||||| || | || || || || ||| | |||| || || Sbjct 17211 GTTGACGACCTGGAACTCACCAGCCAAGACACGACGTGAGTATATGTTGGATGTGTAAGG 17270 Query 244150 CTCGATGCTCTCCGTGTTGCCCAGTATCTGCGCCGTGCTCGCAGTCGGCATGGGCGACAC 244209 ||||| | || |||| |||| ||||| | || || ||||| |||||||||| || Sbjct 17271 CTCGAAACATTCGTTGTTACCCAAAATCTGAGAGGTACTGGCAGTAGGCATGGGCGCCAT 17330 Query 244210 CAGCAGACTGTTCCTCACGCCGTGCCTCTGGA--TGCGGAGTCTGAGCTCGTTCCAGTCC 244267 ||||||||||| | | ||||||| || || ||| | | ||| | ||||||| Sbjct 17331 GAGCAGACTGTTACGGATGCCGTGCTCCTTGACCTGCTCA--CGGAGGGATTCCCAGTCC 17388 Query 244268 CACATGCCCGAGAGGTCCTCGCGTTTGAGGCCCCACATGTCAAACTGCAGCAGCCCCTTG 244327 || | | | || | | || | || ||||||||| ||||| || | |||| Sbjct 17389 CAGAGGTCTGATGGTT--TCACATT-------CCACATGTCGAACTGGAGAATACCCT-- 17437 Query 244328 CTGACG--GGGCTGCCCTCGTAGGTCGGGTAGGGACCGTCGCGCTGGGCCAGCTT-ACAG 244384 | || | ||| ||||| | |||| | ||||||||| || || || ||||| || | Sbjct 17438 CAGAGGTAGGGGAGCCCTTGAAGGTAGAGTAGGGACCCTCCTCCTTGGACAGCTGGACTG 17497 Query 244385 CTCTCGTCGAGGGCGGCGTAGTAGATGGTCTCGAAGATCATCTTGTTCATGTCGCGGGCC 244444 ||| |||||||||| ||||| || || |||||| ||||||| || || || Sbjct 17498 AGGCAGTC-AGGGCGGCGTGATAGATAGTTTCAAAGATCTGTTTGTTCAGTTCACGAGCT 17556 Query 244445 TTGCCGCAGGTGAAGGGGATGCCCATCATCATGAAGACGTCGGCCAGTCCCTGCACGCCG 244504 | | | | ||| || |||| | | ||| | || || || ||||| || || Sbjct 17557 TCGGGGGACTCGAAAGGCATGCGGAGGGCAAGGAATGCATCCGCAAGACCCTGGACACCA 17616 Query 244505 ATGCCGATGGGTCTGTGTCGCTTGTTGGAGCGCATGGCTTCGGGCACGGGGTAAAAGTTG 244564 | || ||||||| ||| ||| ||||| | || || | || || || |||| Sbjct 17617 ACACCAATGGGTCGGTGACGCATGTTGCTGTTACGAGCCTCCTGAACAGGATAGTGGTTG 17676 Query 244565 CCGTCGATCACCTTGTTGAGGTTGCGGGTGATCATGCGGAC-GACGTCGGCCAGCAGCTG 244623 |||| || | |||||| |||||||| || || | || ||| ||| ||| || Sbjct 17677 ACGTCAATGATCTTGTTAAGGTTGCGAACGA-CAGTCTGAGTGACATCGTGCAGTTTTTG 17735 Query 244624 AAAGTCGTACTCGTAGGGATCCTCGGCGATGGTGATCCTCACAAACTCGTTGAGGGCGAC 244683 ||||| || | ||| | | | | || | ||||| ||||| | Sbjct 17736 GAAGTCATA------GCAATCATTGCTG-TAGTCA-----ACAAAAGAAGGAAGGGCCAG 17783 Query 244684 GCTGGCCAGGTTGCAGACGGCCACCTCCTCCGAGTTGGTGTACTGGACAATCTCGGTGCA 244743 | || |||||||||||||| ||||| || | | |||| | || ||||| ||||| Sbjct 17784 GGAAGCGAGGTTGCAGACGGCGACCTCATCAGGAGCGCTGTATTCGATGATCTCAGTGCA 17843 Query 244744 GAGGTT---ACTGCACTTGATGGTGCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGC 244800 ||||| ||||| ||| || || |||| || || || |||| |||| | Sbjct 17844 AAGGTTGGAACTGC---GGATAGTACCGAGGTTCTTCTGGTTACTCTTGCGGTTGGCGTG 17900 Query 244801 GTCCTTGTAGAGCATGAAGGGCCCCCCGGTCTCGAGCTGGGCGACGAGGACGCTGTTCCA 244860 |||||||| ||||||||||| || || ||| ||| || |||| | | || ||| Sbjct 17901 ATCCTTGTAAAGCATGAAGGGGTTGCCAGTTTCGGTCTGAGCCTCGAGAATGGCGTACCA 17960 Query 244861 GAGGTCCCTAGCCTTGACCGTCCTGCGAGCCTTGCCCTCTGCCTCGTAGCGGGTGTACAG 244920 ||| | ||||| | ||| ||||| | ||||| | |||||||| ||| || Sbjct 17961 GAGCTTTTGGGCCTTCATGGTCTTGCGACCTTTGCCGGCCTTCTCGTAGCTCTCGTAGAG 18020 Query 244921 GGCCTCGAACTCGGGGCCCCAGACCTCGTCTAGGCCGGGGCACGACGCCGGG-CACATGA 244979 ||||| ||||| ||| || || | || || |||||| || ||| ||||| | Sbjct 18021 AGCCTCAAACTCATCGCCATAGCAGTCAGCAAGACCAGGGCAC-TCGTTGGGACACATTA 18079 Query 244980 GACTCCACTCGCCGCCGTCCTTGACCCTCTGCATGAAGAGGTCGGGGATCCAGAGGGCCT 245039 || |||| |||||| | || || | || |||||| | ||||||||||| || || Sbjct 18080 GAGTCCAGTCGCCGTTCTTCTCCACACGCTTCATGAACAAATCGGGGATCCACAGAGCGA 18139 Query 245040 GGAAGAGGTCCCTGGTCCTCTGCTCGTCCGAGCCAGTGTTCTTCCTCAGCTCCAAAAAGT 245099 |||| ||||| | | | ||| ||| ||| |||||| | || |||| ||| | Sbjct 18140 GGAACAGGTCACGAGCACGGACCTCCTCCTTTCCATGGTTCTTGCGAAGATCCAGAAATT 18199 Query 245100 CAAAGACGTCGACGTGCCAGGGCTCCATGTAGACAGCGAGGGCGCCGGGCCGCTTGTTGC 245159 | || |||||| ||||||| ||||| | ||||| |||| || ||||| |||||||||| Sbjct 18200 CGAATACGTCGGCGTGCCAAGGCTCGAGGTAGATGGCGAAAGCACCGGGTCGCTTGTTGC 18259 Query 245160 CTCCCTGGTCCACCATCCTCTCGAGC----GCGTTGAAGATGCGCAGGGTAGGCACTATG 245215 | ||||| | || | | |||||| |||||| | || || | || | Sbjct 18260 CACCCTG----ATCAACATATCGAGCAGTGTTGTTGAATACACGGAGCATGGGTGTCACA 18315 Query 245216 CCGTTAGAGTGGCCGTTGGTGCCCTTGATGTAGGCGCCCTTGCCCCTG--AGGTTGCTGA 245273 ||||| ||| |||||||| || || || | ||| || | | | | | || Sbjct 18316 CCGTTGGAGGTACCGTTGGTACCGGCAATATAAGAGCCAGTGGCACGGATACGGTGAACG 18375 Query 245274 TGGACATGCCTAGTCCGCCGGCGTGCTTGGAGATGAGGGCGCAGCTCTTGATGGTGTCTG 245333 | || | || | || || || |||||||| | ||| ||| |||||| |||||| Sbjct 18376 TTGAGA--CCGATGCCACCAGCCATTTTGGAGATCATGGCACAGGTCTTGAGGGTGTCAT 18433 Query 245334 CTATGCCCTCCATGCTGTCCGACTTCATGTTGAGCAGAAAGCAGGAGGACAGCTGGGGCT 245393 || ||||| || |||||| |||||||| || ||| ||||| || ||||||||||||| Sbjct 18434 AAATACCCTCAATACTGTCCTCCTTCATGTCGACCAGGAAGCATGAAGACAGCTGGGGCT 18493 Query 245394 TGGGGCTGCACGAGTTGAACAGAGTGGG 245421 || | | | |||||| || ||||| Sbjct 18494 GAGGAGTACCAGCGTTGAAGAGTGTGGG 18521 >seq1157 Length=14967 Score = 138 bits (152), Expect = 2e-27 Identities = 349/517 (68%), Gaps = 13/517 (3%) Strand=Plus/Plus Query 42633 CCCTGCATCAAGAAGAAGGCGGACTGGGCGCTCAACTGGATCGAGAGTCCCG-ACGCAAC 42691 || ||||||||||| ||||| || ||||| |||| |||||| | | | | | || || Sbjct 10640 CCGTGCATCAAGAAAAAGGCAGAGTGGGCCCTCAGGTGGATCTCG-GACAAGCAGGCCAC 10698 Query 42692 GTTCGGCGAGAGGCTGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTT 42751 || | | | || || || || | || |||||||| || || ||| || || || Sbjct 10699 CTTTGCTCAACGTCTCGTTGCATTCGCTGCTGTCGAGGGTATATTTTTCAGCGGTGCATT 10758 Query 42752 CGCCTCCATCTTCTGGCTCAAGCAG-AAGGTGTCGATGCCCGGACTCACCTTCTCGAACG 42810 ||| || ||||||||| | ||| || |||| | ||||| || | |||||||| || | Sbjct 10759 CGCTTCTATCTTCTGGTTGAAGAAGCGAGGTCT-TATGCCTGGTTTAACCTTCTCTAATG 10817 Query 42811 AACTCATCAGCAGGGACGAGGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCC 42870 | |||||| | || ||||| || || | ||||| || ||||| || ||| | Sbjct 10818 AGCTCATCTCTCGTGATGAGGGTCTTCACACTGACTTCGCATGCCTTCTTCACTC---TC 10874 Query 42871 ACCTC-AGGCACAAGCCCTCGAAGGAGCGGGTCCGGGCCATCATCACGGAGGCCGTGGAG 42929 | ||| ||| | ||| | ||| || | | || |||||| || || ||||| Sbjct 10875 ATCTCAAGGGCCGTGCCAGC-AAGCAGGTAATTCAGGACATCATTACTGATGCCGTCTCT 10933 Query 42930 ATCGAGAAGGAGTTCCTCACGCAGTCGCTGCC-CGTGTCCCTGGTCGGCATGAACCACGA 42988 ||||| ||||| ||||| || || | |||| ||| | ||| | || |||||| || Sbjct 10934 ATCGAAAAGGAATTCCTGACCGAGGCATTGCCTTGTG-CTCTGCTTGGTATGAACTCGGA 10992 Query 42989 CCTCATGTGCAAGTACATCCAGTACGTCGCCGACCATC-TCCTGTGCCAGATGGGTCTCA 43047 || ||| |||||||| ||| ||| ||||||| || || ||| | ||| | Sbjct 10993 TCTTATGAAGCAGTACATCGAGTTCGTTGCCGACCGTCTTCTTGTCGCTCTTGGTAACGA 11052 Query 43048 GCCGCCTCTACAACACGCCGTGCCCCTTCGACTTTATGGAGAACATCTCGTTGGAGGGCA 43107 | | ||||||| | | |||||||||||| |||||||| ||||| | | || | Sbjct 11053 GAAG-GTCTACAAGTCTACCAACCCCTTCGACTTCATGGAGAATATCTCCCTCGGTGGTA 11111 Query 43108 AGACCAACTTTTTCGAGAAGCGCGTCGCCGACTACCA 43144 |||| ||||| || |||||||| || | || ||||| Sbjct 11112 AGACTAACTTCTTTGAGAAGCGTGTAGGTGATTACCA 11148 Score = 116 bits (128), Expect = 7e-21 Identities = 182/259 (70%), Gaps = 5/259 (2%) Strand=Plus/Plus Query 42300 ATCTGGTCCATGTACAAGAAGGCGCAGTTCTCCAACTGGACCGCCGAGGAGATTGACCTG 42359 |||||| |||||||||||| || ||| ||||||||||||||| ||||| || Sbjct 10253 ATCTGGCAGATGTACAAGAAGCACGAGGCTTCCTTCTGGACCGCCGAGGAAATTGATCTT 10312 Query 42360 GCCAAGGACACGGCCGGCTGGGAGTCACTGTCTGAGAAC----GAAAAGTTTTTCCTCAA 42415 ||||||| | || |||| | | || | ||| | || |||| ||| || Sbjct 10313 TCCAAGGATCTGCACGACTGGAA-TAACCGCTTGAATGCAGATGAGCAGTTCTTCGTCTC 10371 Query 42416 AAACATACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCAG 42475 |||| || || ||||||||||| ||||| || || || ||||| ||||||| | || Sbjct 10372 TCACATTCTCGCTTTCTTCGCCGCATCTGATGGTATTGTGAATGAAAACCTGGTCGAGAG 10431 Query 42476 GTTCATGAAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCAT 42535 ||||| ||||| ||| | |||||| || ||||||||||| |||||||| || Sbjct 10432 GTTCAGTGCCGAGGTCCAGATCCCTGAGGCTCGTTGCTTCTACGGTTTCCAGATCATGAT 10491 Query 42536 AGAGAACGTGCACTCTGAG 42554 |||||| | ||||| ||| Sbjct 10492 GGAGAACATCCACTCAGAG 10510 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944323382318400