Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calonectria_20pseudonaviculata_20[genbank_20GCA_5F001696505.1_202016 -07-28] 1,340 sequences; 51,439,042 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq1144 116 9e-21 seq732 109 1e-18 >seq1144 Length=167757 Score = 116 bits (128), Expect = 9e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| ||||| | || || || || | ||| || || || || || || || | | Sbjct 91891 CCACCACGGAGGCGGAGGACCAGGTGGAGGGTGGACTCCTTCTGAATGTTGTAATCAGAG 91832 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || || || || || | || ||||| ||||| || || ||||| || || Sbjct 91831 AGTGTTCGGCCATCCTCAAGCTGCTTTCCGGCGAAAATGAGTCGCTGCTGGTCCGGAGGA 91772 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 ||||| || ||||||||||| |||| || ||||| || |||| ||| ||| || || Sbjct 91771 ATTCCCTCCTTATCCTGGATCTTCGACTTAACGTTGTCAATAGTGTCGGACGACTCCACC 91712 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||| || || ||||| || || |||||||||||||| |||||||| Sbjct 91711 TCGAGGGTAATAGTCTTGCCAGTGAGAGTCTTGACGAAAATCTGCAT 91665 Score = 100 bits (110), Expect = 7e-16 Identities = 160/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 288244 TGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCG 288303 || || || ||||| | || || || |||| ||| || || || || || || || Sbjct 92122 TGACCGCCACGGAGACGGAGGACAAGGTGAAGGGTGGACTCCTTCTGAATGTTGTAATCA 92063 Query 288304 GCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCT 288363 | ||| || || || || || | || ||||| ||||| || || ||||| || Sbjct 92062 GAGAGGGTTCGGCCATCCTCAAGCTGCTTTCCGGCGAAAATGAGTCGCTGCTGGTCCGGA 92003 Query 288364 GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423 || ||||| || ||||||||||| |||| || ||||| || |||| ||| || || Sbjct 92002 GGAATTCCCTCCTTATCCTGGATCTTCGACTTAACGTTGTCAATAGTGTCGGATGACTCG 91943 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || || |||||||| || |||| |||||| || || || ||||| Sbjct 91942 ACCTCAAGGGTAATCGTCTTTCCAGTCAAAGTCTTCACAAAGATTTGCAT 91893 >seq732 Length=233276 Score = 109 bits (120), Expect = 1e-18 Identities = 163/230 (71%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || || | || || || || | ||||| || || ||||| || |||||| Sbjct 60343 CCACCACGAAGGCGGAGGACCAGGTGGAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTC 60402 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| || || || | || || || || ||||| || ||||| || || ||| Sbjct 60403 AGGGTGCGGCCATCCTCGAGCTGCTTACCAGCAAAGATAAGTCGCTGCTGG---TCCGGG 60459 Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423 || || || || |||||||| || | || ||||| || || | ||| || || Sbjct 60460 GGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCC 60519 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || |||||||||||||| || || ||||||||||| |||||||| Sbjct 60520 ACCTCAAGGGTGATCGTCTTCCCCGTGAGGGTCTTGACGAAGATCTGCAT 60569 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179634146808520