Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Calonectria_20pseudonaviculata_20[genbank_20GCA_5F001696505.1_202016
-07-28] 1,340 sequences; 51,439,042 total letters
Query= NC_009899.1
Length=344691
Score E
Sequences producing significant alignments: (Bits) Value
seq1157 131 4e-25
seq541 89.7 1e-12
>seq1157
Length=14967
Score = 131 bits (144), Expect = 4e-25
Identities = 171/237 (72%), Gaps = 0/237 (0%)
Strand=Plus/Plus
Query 243502 ATCATCACAGAAGCAGTTGAAAACGAAAAGGAATTCATTTGCGACGCTATTCCATGCCGG 243561
||||| || || || || | ||||||||||||| | ||| || | || ||
Sbjct 10913 ATCATTACTGATGCCGTCTCTATCGAAAAGGAATTCCTGACCGAGGCATTGCCTTGTGCT 10972
Query 243562 CTTATTGGCATGAACTCTGAACTCATGGGACAGTACATCGAATTCGTAGCCGACCGCATT 243621
|| |||| |||||||| || || ||| ||||||||||| ||||| |||||||| ||
Sbjct 10973 CTGCTTGGTATGAACTCGGATCTTATGAAGCAGTACATCGAGTTCGTTGCCGACCGTCTT 11032
Query 243622 TTCATCGCGCTTGGTTATGAGAAAGTGTACAACTCCAAGAACCCCTTTGCCTTTATGGAG 243681
| |||| |||||| | ||||| || ||||| || | |||||||| | ||| ||||||
Sbjct 11033 CTTGTCGCTCTTGGTAACGAGAAGGTCTACAAGTCTACCAACCCCTTCGACTTCATGGAG 11092
Query 243682 CTCATTTCGCTTCAAGGGAAAACTAACTTCTTCGAAAAGCGTGTCAGTGATTATCAA 243738
|| || || || || ||||||||||| || |||||||| ||||||| |||
Sbjct 11093 AATATCTCCCTCGGTGGTAAGACTAACTTCTTTGAGAAGCGTGTAGGTGATTACCAA 11149
>seq541
Length=473379
Score = 89.7 bits (98), Expect = 1e-12
Identities = 124/174 (71%), Gaps = 0/174 (0%)
Strand=Plus/Plus
Query 334181 GGGGAACCCTTCAAGCTGACCGTTCACAATAGCGCGCATCAGAGTTGATTTACCCGCCCC 334240
|||||| || || | ||| |||| || |||||||| || || || || || | ||
Sbjct 247336 GGGGAAACCCTCGACCTGCTCGTTGTTGATGGCGCGCATGAGGGTGGACTTTCCGGAACC 247395
Query 334241 GTTTGGCCCACACAGACCGTAGCGGTTTCCACGCTTCAGATTGAACCGCGTATTGTTCAG 334300
||| || || || ||||||||||| | |||||||| ||| || | || | ||| ||
Sbjct 247396 GTTGGGACCGCAAAGACCGTAGCGCTGACCACGCTTAAGACGGAGGTGAGTCTGGTTGAG 247455
Query 334301 AAGAATTTTTCCACCATATGCCAGAGAAAATTCACAATCACACAGATCCTCACC 334354
|||||| || |||| || || ||||| || ||| | || |||||||||||
Sbjct 247456 AAGAATCTTGGCACCGTAGGCAAGAGAGAAGGTACAGTTGCAGAGATCCTCACC 247509
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1102861064929000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |