Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Calonectria_20pseudonaviculata_20[genbank_20GCA_5F001696505.1_202016
-07-28] 1,340 sequences; 51,439,042 total letters
Query= NC_011183.1
Length=154641
Score E
Sequences producing significant alignments: (Bits) Value
seq907 201 1e-46
>seq907
Length=75695
Score = 201 bits (222), Expect = 1e-46
Identities = 443/657 (67%), Gaps = 8/657 (1%)
Strand=Plus/Minus
Query 93715 AATTACGATTACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGC 93774
|| ||| | ||||||| |||||| || || ||| || |||||||||||||| |||||
Sbjct 18704 AACTACCAATACTTTGGCTTCAAGACCCTCGAGCGATCTTACCTCCTCAAGATTGATGGT 18645
Query 93775 AGGGTTTCCGAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCAC 93834
| | || ||||||||||| || || | ||||| ||| | |||| || || ||
Sbjct 18644 AAGATTGTTGAGCGACCGCAGCACATGATTATGCGTGTCTCTGTCGGTATCTGGGGTGAC 18585
Query 93835 GACATGCCGAATGTTTTGCGGGCTTTCAGAGACATGCGGGACAAGAGGTATAC-CATGGC 93893
|||| | ||| | | | | || |||| ||| | || |||| |
Sbjct 18584 AACATTGAGCGTGTCCTCGAGACCTACAACCTCATGTCCATGAAGTTCTTCACACATG-C 18526
Query 93894 CACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGAT 93953
| || || || |||||||| || || || ||| ||| ||||||| || |||||| |
Sbjct 18525 TTCTCCCACACTCTTCAACGCTGGTACTCCTCAGCCCCAGCTGTCTTCATGCTTCCTGGT 18466
Query 93954 -GACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCA 94012
||| | |||| ||| || || |||| |||| ||||||| |||||| | |
Sbjct 18465 CGAC-ATGAAGGAGGACAGTATTGAGGGTATTTATGACACCCTCAAGACCTGTGCCATGA 18407
Query 94013 TCTCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTA--CGTGCCAGGGGTTC 94070
|||| ||| || || || ||||| ||| || ||| |||| ||||||| || ||
Sbjct 18406 TCTCCAAAATGGCTGGTGGCATCGGTCTCAACGTTCAC--CGTATCCGTGCCACTGGCTC 18349
Query 94071 CTACATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAA 94130
|| || ||||||||| || ||||||||||| | || |||||||| || |||||
Sbjct 18348 TTATATTGCCGGTACCAACGGTACCTCCAACGGTGTGACACCCATGCTCCGTGTATTCAA 18289
Query 94131 CAACGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTA 94190
|||| | || || || || || |||||||| | | | ||| ||||||| ||||
Sbjct 18288 CAACACTGCTCGATATGTTGATCAGGGTGGCAACAAGCGACCCGGTGCTTTCGCCATCTA 18229
Query 94191 TCTCGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAA 94250
|||||||| |||||||| ||||| | || | || || || |||||||| || ||
Sbjct 18228 CCTCGAGCCTTGGCACGCCGACGTATTCGAATTTCTGGATCTTCGCAAGAACCATGGAAA 18169
Query 94251 CGATCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAA 94310
|| || | || | ||||| ||| |||||| ||| | || || | || |||||
Sbjct 18168 GGAGGAGGTCCGTGCTCGTGACCTGTTCCTCGCTCTGTGGATCCCCGATTTGTTCATGAA 18109
Query 94311 ACGCGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACT 94367
|| || ||||| ||| || ||||| ||| | |||||||| || || || || ||
Sbjct 18108 GCGTGTGGAGAAGAACGGCGACTGGACTCTAATGTGTCCCAACGAGTGCCCTGGTCT 18052
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 494714913386400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |