Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calonectria_20pseudonaviculata_20[genbank_20GCA_5F001696505.1_202016 -07-28] 1,340 sequences; 51,439,042 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq907 201 1e-46 >seq907 Length=75695 Score = 201 bits (222), Expect = 1e-46 Identities = 443/657 (67%), Gaps = 8/657 (1%) Strand=Plus/Minus Query 93715 AATTACGATTACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGC 93774 || ||| | ||||||| |||||| || || ||| || |||||||||||||| ||||| Sbjct 18704 AACTACCAATACTTTGGCTTCAAGACCCTCGAGCGATCTTACCTCCTCAAGATTGATGGT 18645 Query 93775 AGGGTTTCCGAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCAC 93834 | | || ||||||||||| || || | ||||| ||| | |||| || || || Sbjct 18644 AAGATTGTTGAGCGACCGCAGCACATGATTATGCGTGTCTCTGTCGGTATCTGGGGTGAC 18585 Query 93835 GACATGCCGAATGTTTTGCGGGCTTTCAGAGACATGCGGGACAAGAGGTATAC-CATGGC 93893 |||| | ||| | | | | || |||| ||| | || |||| | Sbjct 18584 AACATTGAGCGTGTCCTCGAGACCTACAACCTCATGTCCATGAAGTTCTTCACACATG-C 18526 Query 93894 CACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGAT 93953 | || || || |||||||| || || || ||| ||| ||||||| || |||||| | Sbjct 18525 TTCTCCCACACTCTTCAACGCTGGTACTCCTCAGCCCCAGCTGTCTTCATGCTTCCTGGT 18466 Query 93954 -GACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCA 94012 ||| | |||| ||| || || |||| |||| ||||||| |||||| | | Sbjct 18465 CGAC-ATGAAGGAGGACAGTATTGAGGGTATTTATGACACCCTCAAGACCTGTGCCATGA 18407 Query 94013 TCTCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTA--CGTGCCAGGGGTTC 94070 |||| ||| || || || ||||| ||| || ||| |||| ||||||| || || Sbjct 18406 TCTCCAAAATGGCTGGTGGCATCGGTCTCAACGTTCAC--CGTATCCGTGCCACTGGCTC 18349 Query 94071 CTACATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAA 94130 || || ||||||||| || ||||||||||| | || |||||||| || ||||| Sbjct 18348 TTATATTGCCGGTACCAACGGTACCTCCAACGGTGTGACACCCATGCTCCGTGTATTCAA 18289 Query 94131 CAACGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTA 94190 |||| | || || || || || |||||||| | | | ||| ||||||| |||| Sbjct 18288 CAACACTGCTCGATATGTTGATCAGGGTGGCAACAAGCGACCCGGTGCTTTCGCCATCTA 18229 Query 94191 TCTCGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAA 94250 |||||||| |||||||| ||||| | || | || || || |||||||| || || Sbjct 18228 CCTCGAGCCTTGGCACGCCGACGTATTCGAATTTCTGGATCTTCGCAAGAACCATGGAAA 18169 Query 94251 CGATCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAA 94310 || || | || | ||||| ||| |||||| ||| | || || | || ||||| Sbjct 18168 GGAGGAGGTCCGTGCTCGTGACCTGTTCCTCGCTCTGTGGATCCCCGATTTGTTCATGAA 18109 Query 94311 ACGCGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACT 94367 || || ||||| ||| || ||||| ||| | |||||||| || || || || || Sbjct 18108 GCGTGTGGAGAAGAACGGCGACTGGACTCTAATGTGTCCCAACGAGTGCCCTGGTCT 18052 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494714913386400