Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calonectria_20pseudonaviculata_20[genbank_20GCA_5F001696505.1_202016 -07-28] 1,340 sequences; 51,439,042 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq732 107 2e-18 seq1144 96.9 3e-15 >seq732 Length=233276 Score = 107 bits (118), Expect = 2e-18 Identities = 139/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 138423 CTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATA 138482 |||||| || |||||||||||||||| || || |||||||| || ||||| | | | Sbjct 60378 CTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTACCAGCAAA 60437 Query 138483 GATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTG 138542 ||| || ||||| |||||||| || || || || ||||| ||| || || | | Sbjct 60438 GATAAGTCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTT 60497 Query 138543 TTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTAC 138602 || | |||||||| ||||||||||| | || | ||| || || || || || || || Sbjct 60498 GTCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATCGTCTTCCCCGTGAGGGTCTTGAC 60557 Query 138603 AAAAATCTGCAT 138614 || |||||||| Sbjct 60558 GAAGATCTGCAT 60569 >seq1144 Length=167757 Score = 96.9 bits (106), Expect = 3e-15 Identities = 141/196 (72%), Gaps = 4/196 (2%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| ||||||||||| || | || || ||||| || || || |||| Sbjct 91858 GACTCCTTCTGAATGTTGTAATCAGAGAGTGTTCGGCCATCCTCAAGCTGCTTTCCGGCG 91799 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAA- 138539 | || || ||||| ||||||||||| || || || || || ||| || | |||| Sbjct 91798 AAAATGAGTCGCTGCTGGTCCGGAGGAATTCCCTCCTTATCCTGGATCTTC-GACTTAAC 91740 Query 138540 -TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTT 138598 |||| | | ||||||| |||||||||||||| || | || || ||||| ||||| | Sbjct 91739 GTTGT-CAATAGTGTCGGACGACTCCACCTCGAGGGTAATAGTCTTGCCAGTGAGAGTCT 91681 Query 138599 TTACAAAAATCTGCAT 138614 | || ||||||||||| Sbjct 91680 TGACGAAAATCTGCAT 91665 Score = 84.2 bits (92), Expect = 2e-11 Identities = 125/174 (72%), Gaps = 4/174 (2%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| || |||||||||||| | || || ||||| || || || || | | Sbjct 91346 GACTCCTTCTGGATGTTGTAGTCGGAGAGGGTTCGGCCATCCTCAAGCTGCTTGCCAGCA 91287 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAA- 138539 |||| |||||||| |||||||| || || ||||| ||||| ||| | |||| || | Sbjct 91286 AAGATGAGACGCTGCTGGTCCGGGGGGATGCCTTCCTTGTC-CTGAATCTTTGACTTGAC 91228 Query 138540 -TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCA 138592 ||| || | ||| |||| ||||| ||||||| || | || || || |||| Sbjct 91227 GTTG-TCGATGGTATCGGAGGACTCGACCTCGAGGGTGATAGTCTTTCCCGTCA 91175 Score = 84.2 bits (92), Expect = 2e-11 Identities = 158/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 ||||| || | ||| | || | || | | | |||||||| ||||||||||| || Sbjct 92119 CCGCCACGGAGACGGAGGACAAGGTGAAGGGTGGACTCCTTCTGAATGTTGTAATCAGAG 92060 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | || || ||||| || || || |||| | || || ||||| ||||||||||| Sbjct 92059 AGGGTTCGGCCATCCTCAAGCTGCTTTCCGGCGAAAATGAGTCGCTGCTGGTCCGGAGGA 92000 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAA--TTGTTCCACGGTGTCGGTCGACTCCA 138565 || || || || || || | || | |||| ||| || | ||||||| ||||| | Sbjct 91999 ATTCCCTCCTTATC-CTGGATCTTCGACTTAACGTTG-TCAATAGTGTCGGATGACTCGA 91942 Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 |||| | || | ||| || ||||||| ||| || ||||| || ||||| Sbjct 91941 CCTCAAGGGTAATCGTCTTTCCAGTCAAAGTCTTCACAAAGATTTGCAT 91893 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496254087604800