Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calonectria_20pseudonaviculata_20[genbank_20GCA_5F001696505.1_202016 -07-28] 1,340 sequences; 51,439,042 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq732 111 1e-19 seq1144 102 8e-17 seq897 82.4 7e-11 >seq732 Length=233276 Score = 111 bits (122), Expect = 1e-19 Identities = 142/193 (74%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 126922 CTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTA 126981 ||| || || || ||||| |||| || ||||| ||| || ||||| || ||||| | Sbjct 60378 CTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTACCAGCAAA 60437 Query 126982 GATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTT 127040 ||| | ||||||||| || || || ||||||||||||||| ||| || ||||| ||| Sbjct 60438 GATAAGTCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTT 60497 Query 127041 GTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTA 127100 | |||| |||||| | | ||| || || | ||| | ||| || || || || || || | Sbjct 60498 G-TCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATCGTCTTCCCCGTGAGGGTCTTGA 60556 Query 127101 CAAAAATCTGCAT 127113 | || |||||||| Sbjct 60557 CGAAGATCTGCAT 60569 >seq1144 Length=167757 Score = 102 bits (112), Expect = 8e-17 Identities = 143/198 (72%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || ||||| || ||||| |||||||| | || || ||| || ||||| ||||| Sbjct 91861 GTGGACTCCTTCTGAATGTTGTAATCAGAGAGTGTTCGGCCATCCTCAAGCTGCTTTCCG 91802 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 ||| | || | ||||||||| || ||||| || |||||||| ||| ||| ||| ||| Sbjct 91801 GCGAAAATGAGTCGCTGCTGGTCCGGAGGAATTCCCTCCTTATCCTGGATCTTCGACTTA 91742 Query 127037 A-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGT 127095 | ||||| | | ||||| | ||| || |||| ||| | || ||||| || ||||| Sbjct 91741 ACGTTGT-CAATAGTGTCGGACGACTCCACCTCGAGGGTAATAGTCTTGCCAGTGAGAGT 91683 Query 127096 TTTTACAAAAATCTGCAT 127113 || || ||||||||||| Sbjct 91682 CTTGACGAAAATCTGCAT 91665 Score = 89.7 bits (98), Expect = 5e-13 Identities = 135/187 (72%), Gaps = 4/187 (2%) Strand=Plus/Minus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 ||||||||||| || |||||||| ||| | || || ||| || ||||| || ||| Sbjct 91633 GTAGACTCTTTCTGGATATTGTAGTCGGAAAGGGTTCGGCCATCCTCAAGCTGCTTGCCA 91574 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTG-CTT 127035 || |||| | |||||||| || || || ||||| ||||||||| ||| | | || ||| Sbjct 91573 GCAAAGATGAGACGCTGCTGGTCCGGGGGGATGCCTTCCTTGTCC-TGAATCTTTGACTT 91515 Query 127036 GA-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAG 127094 | |||| |||| ||| || | | |||||| |||| || | || ||||| || || | Sbjct 91514 AACGTTG-TCGATGGTATCAGAAGACTCGACCTCGAGAGTGATGGTCTTGCCAGTGAGGG 91456 Query 127095 TTTTTAC 127101 | || || Sbjct 91455 TCTTGAC 91449 >seq897 Length=151945 Score = 82.4 bits (90), Expect = 7e-11 Identities = 126/180 (70%), Gaps = 0/180 (0%) Strand=Plus/Minus Query 126926 TTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATC 126985 || || || ||||| ||| | ||||| ||| || || || || ||||| ||||| Sbjct 73701 TTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCCTCGAGTTGCTTGCCAGCAAAGATC 73642 Query 126986 AATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCG 127045 | |||||||| || || || || |||||||||||| ||| || ||||| | ||| Sbjct 73641 AGGCGCTGCTGGTCCGGGGGAATACCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCG 73582 Query 127046 ACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAA 127105 | |||||||| |||||| || | ||| | || ||||| || || || || || ||| Sbjct 73581 ATGGTGTCCGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTGAGGGTCTTCACGAAA 73522 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475492835361600