Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Calonectria_20pseudonaviculata_20[genbank_20GCA_5F001696505.1_202016
-07-28] 1,340 sequences; 51,439,042 total letters
Query= NC_011616.1
Length=148634
Score E
Sequences producing significant alignments: (Bits) Value
seq732 111 1e-19
seq1144 102 8e-17
seq897 82.4 7e-11
>seq732
Length=233276
Score = 111 bits (122), Expect = 1e-19
Identities = 142/193 (74%), Gaps = 2/193 (1%)
Strand=Plus/Plus
Query 126922 CTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTA 126981
||| || || || ||||| |||| || ||||| ||| || ||||| || ||||| |
Sbjct 60378 CTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTACCAGCAAA 60437
Query 126982 GATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTT 127040
||| | ||||||||| || || || ||||||||||||||| ||| || ||||| |||
Sbjct 60438 GATAAGTCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTT 60497
Query 127041 GTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTA 127100
| |||| |||||| | | ||| || || | ||| | ||| || || || || || || |
Sbjct 60498 G-TCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATCGTCTTCCCCGTGAGGGTCTTGA 60556
Query 127101 CAAAAATCTGCAT 127113
| || ||||||||
Sbjct 60557 CGAAGATCTGCAT 60569
>seq1144
Length=167757
Score = 102 bits (112), Expect = 8e-17
Identities = 143/198 (72%), Gaps = 2/198 (1%)
Strand=Plus/Minus
Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976
|| ||||| || ||||| |||||||| | || || ||| || ||||| |||||
Sbjct 91861 GTGGACTCCTTCTGAATGTTGTAATCAGAGAGTGTTCGGCCATCCTCAAGCTGCTTTCCG 91802
Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036
||| | || | ||||||||| || ||||| || |||||||| ||| ||| ||| |||
Sbjct 91801 GCGAAAATGAGTCGCTGCTGGTCCGGAGGAATTCCCTCCTTATCCTGGATCTTCGACTTA 91742
Query 127037 A-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGT 127095
| ||||| | | ||||| | ||| || |||| ||| | || ||||| || |||||
Sbjct 91741 ACGTTGT-CAATAGTGTCGGACGACTCCACCTCGAGGGTAATAGTCTTGCCAGTGAGAGT 91683
Query 127096 TTTTACAAAAATCTGCAT 127113
|| || |||||||||||
Sbjct 91682 CTTGACGAAAATCTGCAT 91665
Score = 89.7 bits (98), Expect = 5e-13
Identities = 135/187 (72%), Gaps = 4/187 (2%)
Strand=Plus/Minus
Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976
||||||||||| || |||||||| ||| | || || ||| || ||||| || |||
Sbjct 91633 GTAGACTCTTTCTGGATATTGTAGTCGGAAAGGGTTCGGCCATCCTCAAGCTGCTTGCCA 91574
Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTG-CTT 127035
|| |||| | |||||||| || || || ||||| ||||||||| ||| | | || |||
Sbjct 91573 GCAAAGATGAGACGCTGCTGGTCCGGGGGGATGCCTTCCTTGTCC-TGAATCTTTGACTT 91515
Query 127036 GA-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAG 127094
| |||| |||| ||| || | | |||||| |||| || | || ||||| || || |
Sbjct 91514 AACGTTG-TCGATGGTATCAGAAGACTCGACCTCGAGAGTGATGGTCTTGCCAGTGAGGG 91456
Query 127095 TTTTTAC 127101
| || ||
Sbjct 91455 TCTTGAC 91449
>seq897
Length=151945
Score = 82.4 bits (90), Expect = 7e-11
Identities = 126/180 (70%), Gaps = 0/180 (0%)
Strand=Plus/Minus
Query 126926 TTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATC 126985
|| || || ||||| ||| | ||||| ||| || || || || ||||| |||||
Sbjct 73701 TTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCCTCGAGTTGCTTGCCAGCAAAGATC 73642
Query 126986 AATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCG 127045
| |||||||| || || || || |||||||||||| ||| || ||||| | |||
Sbjct 73641 AGGCGCTGCTGGTCCGGGGGAATACCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCG 73582
Query 127046 ACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAA 127105
| |||||||| |||||| || | ||| | || ||||| || || || || || |||
Sbjct 73581 ATGGTGTCCGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTGAGGGTCTTCACGAAA 73522
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 475492835361600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |