Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calonectria_20pseudonaviculata_20[genbank_20GCA_5F001696505.1_202016 -07-28] 1,340 sequences; 51,439,042 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq1157 125 9e-24 >seq1157 Length=14967 Score = 125 bits (138), Expect = 9e-24 Identities = 159/216 (74%), Gaps = 6/216 (3%) Strand=Plus/Minus Query 127531 GTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACC 127590 ||| |||||||| ||||| |||||||| ||||| |||||| | ||| ||||| ||||| Sbjct 10846 GTGAAGACCCTCATCACGAGAGATGAGCTCATTAGAGAAGGTTAAACCAGGCATAAGACC 10787 Query 127591 CCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACA 127650 ||||||||||||||||| || | | |||| || ||| || || ||||| ||| Sbjct 10786 TCGCTTCTTCAACCAGAAGATAGAAGCGAATGCACCGCTGAAAAATATACCCTCGACAGC 10727 Query 127651 CGCGAACGCAAATAGACGCTCGGCAAAGGAGCGGGACT--TTGTATCA-AACCACTTCAT 127707 ||||| |||| ||||| | ||||||| || || |||| | | |||| | | Sbjct 10726 AGCGAATGCAACGAGACGTTGAGCAAAGG---TGGCCTGCTTGTCCGAGATCCACCTGAG 10670 Query 127708 CGCCCACTGTGCCTTTTTCTCGATACATGGGACGGT 127743 ||||||| ||||||||||| ||| || ||||| || Sbjct 10669 GGCCCACTCTGCCTTTTTCTTGATGCACGGGACTGT 10634 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613496923754400