Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Calonectria_20pseudonaviculata_20[genbank_20GCA_5F001696505.1_202016
-07-28] 1,340 sequences; 51,439,042 total letters
Query= NC_013772.1
Length=176677
Score E
Sequences producing significant alignments: (Bits) Value
seq732 123 3e-23
seq897 105 8e-18
seq1144 93.3 5e-14
>seq732
Length=233276
Score = 123 bits (136), Expect = 3e-23
Identities = 158/215 (73%), Gaps = 2/215 (1%)
Strand=Plus/Plus
Query 46385 ACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCG 46444
||||| || | || |||||||| ||||| ||||||||| || ||||| | || |||
Sbjct 60361 ACCAGGTGGAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCG 60420
Query 46445 AGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 46504
|||||||| || || || || | ||||||||||| | || | || |||||||||| |
Sbjct 60421 AGCTGCTTACCAGCAAAGATAAGTCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGG 60480
Query 46505 ATCTTCTTCTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTT 46563
||||| ||||| ||| | | | |||||| || ||||| || | ||||| || ||
Sbjct 60481 ATCTTGGACTTGA-CGTTGTCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATCGTCTT 60539
Query 46564 GCCCGTCAGCGTTTTAACAAAGATTTGCATTTTGC 46598
||||| || || || || ||||| ||||| ||||
Sbjct 60540 CCCCGTGAGGGTCTTGACGAAGATCTGCATCTTGC 60574
>seq897
Length=151945
Score = 105 bits (116), Expect = 8e-18
Identities = 132/181 (73%), Gaps = 0/181 (0%)
Strand=Plus/Minus
Query 46404 CCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATA 46463
|||| ||||| ||||||||||| || ||||| | || ||||| |||||||| || || |
Sbjct 73703 CCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCCTCGAGTTGCTTGCCAGCAAAGA 73644
Query 46464 TCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG 46523
||| |||||||||||| | || | | |||||||||| |||||| ||||| |
Sbjct 73643 TCAGGCGCTGCTGGTCCGGGGGAATACCCTCCTTGTCCTGGATCTTGGACTTGACATTGT 73584
Query 46524 CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAA 46583
| | ||||| || || || || | |||||||| |||||||| || || || || |
Sbjct 73583 CGATGGTGTCCGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTGAGGGTCTTCACGA 73524
Query 46584 A 46584
|
Sbjct 73523 A 73523
>seq1144
Length=167757
Score = 93.3 bits (102), Expect = 5e-14
Identities = 138/193 (72%), Gaps = 2/193 (1%)
Strand=Plus/Minus
Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461
|||||| || || ||||| || || || || || | || || |||||||| ||||||||
Sbjct 91856 CTCCTTCTGAATGTTGTAATCAGAGAGTGTTCGGCCATCCTCAAGCTGCTTTCCGGCGAA 91797
Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521
|| | ||||||||||| | || | | |||||| ||| ||||||| ||| | |||
Sbjct 91796 AATGAGTCGCTGCTGGTCCGGAGGAATTCCCTCCTTATCCTGGATCTTCGACTT-AACGT 91738
Query 46522 CG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAA 46580
| | | |||||| ||| ||||| || | || || || ||||| || || || || |
Sbjct 91737 TGTCAATAGTGTCGGACGACTCCACCTCGAGGGTAATAGTCTTGCCAGTGAGAGTCTTGA 91678
Query 46581 CAAAGATTTGCAT 46593
| || || |||||
Sbjct 91677 CGAAAATCTGCAT 91665
Score = 93.3 bits (102), Expect = 5e-14
Identities = 138/193 (72%), Gaps = 2/193 (1%)
Strand=Plus/Minus
Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461
|||||| || || ||||| || || || || || | || || |||||||| ||||||||
Sbjct 92084 CTCCTTCTGAATGTTGTAATCAGAGAGGGTTCGGCCATCCTCAAGCTGCTTTCCGGCGAA 92025
Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521
|| | ||||||||||| | || | | |||||| ||| ||||||| ||| | |||
Sbjct 92024 AATGAGTCGCTGCTGGTCCGGAGGAATTCCCTCCTTATCCTGGATCTTCGACTTAA-CGT 91966
Query 46522 CGCCACC-GTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAA 46580
| || |||||| || || || || | || || || || || |||| || || |
Sbjct 91965 TGTCAATAGTGTCGGATGACTCGACCTCAAGGGTAATCGTCTTTCCAGTCAAAGTCTTCA 91906
Query 46581 CAAAGATTTGCAT 46593
|||||||||||||
Sbjct 91905 CAAAGATTTGCAT 91893
Score = 86.0 bits (94), Expect = 7e-12
Identities = 123/171 (72%), Gaps = 2/171 (1%)
Strand=Plus/Minus
Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461
|||||| ||||| ||||||||||| || || || | || || ||||||||||| || ||
Sbjct 91344 CTCCTTCTGGATGTTGTAGTCGGAGAGGGTTCGGCCATCCTCAAGCTGCTTGCCAGCAAA 91285
Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521
|| | ||||||||||| | || | || ||||||||| ||||| ||||| |||
Sbjct 91284 GATGAGACGCTGCTGGTCCGGGGGGATGCCTTCCTTGTCCTGAATCTTTGACTTGA-CGT 91226
Query 46522 CG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCA 46571
| | | || ||| || || || || | ||||| || || |||||||
Sbjct 91225 TGTCGATGGTATCGGAGGACTCGACCTCGAGGGTGATAGTCTTTCCCGTCA 91175
Score = 84.2 bits (92), Expect = 2e-11
Identities = 139/198 (70%), Gaps = 2/198 (1%)
Strand=Plus/Minus
Query 46385 ACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCG 46444
||||| || | ||| ||| || ||||||||||||||||| || || || | || ||
Sbjct 91645 ACCAGGTGGAGGGTAGACTCTTTCTGGATATTGTAGTCGGAAAGGGTTCGGCCATCCTCA 91586
Query 46445 AGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 46504
||||||||||| || || || | ||||||||||| | || | || |||||||||
Sbjct 91585 AGCTGCTTGCCAGCAAAGATGAGACGCTGCTGGTCCGGGGGGATGCCTTCCTTGTCCTGA 91526
Query 46505 ATCTTCTTCTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTT 46563
||||| ||| | ||| | | | || || || || || || | |||||||| ||
Sbjct 91525 ATCTTTGACTT-AACGTTGTCGATGGTATCAGAAGACTCGACCTCGAGAGTGATGGTCTT 91467
Query 46564 GCCCGTCAGCGTTTTAAC 46581
||| || || || || ||
Sbjct 91466 GCCAGTGAGGGTCTTGAC 91449
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 565228932256800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |