Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calonectria_20pseudonaviculata_20[genbank_20GCA_5F001696505.1_202016 -07-28] 1,340 sequences; 51,439,042 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq1293 237 2e-57 seq1272 170 2e-37 seq907 93.3 5e-14 >seq1293 Length=96073 Score = 237 bits (262), Expect = 2e-57 Identities = 433/630 (69%), Gaps = 8/630 (1%) Strand=Plus/Minus Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 ||||| || |||||||| | ||| || || || || || | ||||| || ||||| ||| Sbjct 73681 TCGAAGTCCTCACCACCAAGGTGAGTGTCACCGGCAGTGGACTTGACCTCGAAGATGCCT 73622 Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576 | || || | | | || ||||| || ||||| || |||| ||| || ||||| ||| Sbjct 73621 TCCTCGATAGTGAGAAGGGAGACATCGAAAGTACCGCCGCCCAAGTCGAAGATGAGAACG 73562 Query 7577 TTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCA 7636 || ||| | || ||||| ||||| || || |||||||| || || || ||||| Sbjct 73561 TTGCGCTCGCCCTCAACCTTCTTGTCGAGGCCATAAGCGATAGCGGCAGCAGTGGGTTCG 73502 Query 7637 TTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCG-CATCTTTCGTCGCTTGTCG 7695 || || |||||||| ||| ||||| || || | |||| |||| || || ||||| || Sbjct 73501 TTGATGATACGAAGGACGTTGAGGCCGGCGAT-GAGGCCGGCATCCTTGGTAGCTTGACG 73443 Query 7696 TTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAG 7755 ||| ||||| |||||||| ||||| || ||||| || | |||| ||| |||||| Sbjct 73442 TTGGCTGTCGTTGAAGTAGGCGGGGACGGTGACGACAGCATTGTTGACGGTCTCACCGAG 73383 Query 7756 ATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGC 7815 || | || || | || ||| ||||| || ||||| || || || || || | | Sbjct 73382 GTAGGCCTCAGCAGTCTCACGCATCTTGGTGAGGACCATGGAGGAGATTTCCTCGGGAGT 73323 Query 7816 AAACTGTTTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCACCGGG 7875 || | || || || || || || || || || || | || || | || || Sbjct 73322 GAAGTTCTTGGTCTCGCCCTTGAACTCGACCTCGATGACAGGCTTGCCAGCCTTGTCGAC 73263 Query 7876 GATAACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTTCT 7935 ||| ||| | | | | ||||| ||| | ||||||| |||| ||||| | Sbjct 73262 GAT---CTTGAAGGGGAAGTGCTTCATGTCGGCCTGGACCTCAGGGTCGCTGAACTTGCG 73206 Query 7936 TCCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTT 7995 ||||| || ||||| || || || || ||||| | |||||||||||| |||||||| Sbjct 73205 GCCGATCAGGCGCTTGGCGTCGAAGACAGTGTTCTGGGGGTTCATGGCAACCTGGTTCTT 73146 Query 7996 CGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTCGT 8055 || || || |||||||||||||| | || || || ||||| | || ||||| || Sbjct 73145 GGCGGCATCACCGATAAGACGTTC---GGTGTCGGTGAAACCGACGAAAGAGGGGGTGGT 73089 Query 8056 TCGATTCCCTTGGTCGTTCGCAATAATTTC 8085 ||| || || |||||||| ||||| || || Sbjct 73088 TCGGTTGCCCTGGTCGTTGGCAATGATATC 73059 Score = 87.8 bits (96), Expect = 2e-12 Identities = 116/161 (72%), Gaps = 0/161 (0%) Strand=Plus/Minus Query 7226 CGGAACAAGTCCATACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGAAATCA 7285 ||||| | |||| || || ||||||||||| || || ||||| || || ||||||||| Sbjct 74142 CGGAAAAGGTCCTGGCAAAGCTCCTCAAAACGGGCTCGAGTAATCGAAGTGTAGAAATCA 74083 Query 7286 ACGCCGTCGTATAACGAATCAATTTCAATGGTTGTTTGTGCCGTCGAAGATAACGTTCGC 7345 || || ||| | | || || |||||||| | || || || | ||||| | || || Sbjct 74082 ACACCCTCGAAGAGAGAGTCGATTTCAATCGAAGTCTGAGCAGAGGAAGACAGAGTACGT 74023 Query 7346 TTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACG 7386 || || |||||||| || || || | ||| || || || || Sbjct 74022 TTGGCACGCTCACAGGCAGTGCGGAGACGTCGCAGAGCGCG 73982 >seq1272 Length=124026 Score = 170 bits (188), Expect = 2e-37 Identities = 366/542 (68%), Gaps = 9/542 (2%) Strand=Plus/Minus Query 7244 AGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAA 7303 || |||||||| || |||||||| |||| | | ||| || | || || | | || Sbjct 54080 AGCTCCTCAAATCGGGCACGGGTGATGGTCGCGTTGAAGTCCGCACCATCAAAGAGAGAG 54021 Query 7304 TCAATTTCAATGGTTGTTTGTGC--CGTCGAAGATAACGTTCGCTTTGCGCGCTCACACG 7361 ||||| |||||||| | || || || | ||| | || ||||| || |||||||| | Sbjct 54020 TCAATCTCAATGGTGGCCTGAGCACCGCTGGAGAGA--GTACGCTTGGCACGCTCACAAG 53963 Query 7362 CCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAAATATCTTTCTTATGTTTACGTT 7421 | ||||| | ||| || |||||||| | || |||||| | || ||||| || || | Sbjct 53962 CAGTTCGGAGACGTCGGAGGGCACGAGCGTCACCGGAGAGGTCCTTCTTGCTCTTGCGCT 53903 Query 7422 TAAACTCTTCAGAGAAGTG-TCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGTGT 7480 || || | | |||| |||| |||| | | |||||||| | |||||||||||| Sbjct 53902 GGAAGTCCTTCTTGCAGTGGTCGA-GGAGGTTGGTGTCGAAATCCTGACCACCCAAGTGG 53844 Query 7481 GTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACA 7540 || || || ||||| || ||||| |||| ||| || | ||| | | | || ||| Sbjct 53843 GTGTCACCAGCGGTGGCCTTGACGGTGAAGACACCGCCCTGGATGGTGAGGAGGGAGACA 53784 Query 7541 TCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTATCGTCGTC---TTTGTTC 7597 || || ||||||||||| || || | || || ||||| || | ||| ||| Sbjct 53783 TCGAAAGTACCACCACCAAGATCGTAGATCAGGACGTTGCGCTCCTTGTCAGACTTGCCA 53724 Query 7598 TTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTTC 7657 |||| ||||| || ||||| || || || || || ||||| ||||| || ||| Sbjct 53723 GCGCCGAGGCCGTAGGCAATAGCGGCGGCGGTAGGCTCGTTAATGATACGGAGGACGTTG 53664 Query 7658 AGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCC 7717 || || || || | | ||||| || || || ||||| || ||||| |||||||| Sbjct 53663 AGACCGGCGATGGCACCGGCATCCTTGGTGGCCTGTCGCTGGTTGTCGTTGAAGTAGGCG 53604 Query 7718 GGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCTTTC 7777 ||||| || | ||| || | | || ||||| || || | | || || || || ||| Sbjct 53603 GGGACAGTGATGACGGCCTTCTCAACCTTCTTGCCAAGCTTGGTCTCGGCAATCTCCTTC 53544 Query 7778 AT 7779 || Sbjct 53543 AT 53542 >seq907 Length=75695 Score = 93.3 bits (102), Expect = 5e-14 Identities = 369/573 (64%), Gaps = 17/573 (3%) Strand=Plus/Plus Query 105559 TCAACGCGTTTCATGAACAAATCTGGAATCCACATGGCTGAAAAGAGGTCTCGACACCTC 105618 || || || |||||||||||||| || ||||||| || || ||||| ||| | Sbjct 18100 TCCACACGCTTCATGAACAAATCGGGGATCCACAGAGCGAGGAACAGGTCACGAGCACGG 18159 Query 105619 GCCTCTTCATCACCTTGATTCAAACGAATTTCGAGAAAATCGAGAATATCGGCGTGCCAT 105678 |||| || | || || ||| |||| || ||||| |||| | ||||||||||| Sbjct 18160 ACCTCCTCCTTTCCATGGTTCTTGCGAAGATCCAGAAATTCGAATACGTCGGCGTGCCAA 18219 Query 105679 GGTTCTAAATAGACTGCAATAG-ACC------CTTTACGACGCCCCGCTTGATTGACATA 105731 || || | |||| || | || ||| ||| | ||| | | |||| ||||| Sbjct 18220 GGCTCGAGGTAGATGGCGAAAGCACCGGGTCGCTT---GTTGCCAC-CCTGATCAACATA 18275 Query 105732 TCTTGCGGTTGAGTTATACACTCGTAACATTGGAATAATACCATCGGATGTTCCATTTGT 105791 || || || ||| | || || | ||| || | | ||| | ||| || || || || Sbjct 18276 TCGAGCAGTGTTGTTGAATACACGGAGCATGGGTGTCACACCGTTGGAGGTACCGTTGGT 18335 Query 105792 TCCACGAATATGTGATTTATTTGCACGTACATCGTGAACGTGTAACCCAATACCCCCAGC 105851 || ||||| || | | ||||| | | |||||||| | || || || ||||| Sbjct 18336 ACCGGCAATATAAGAGCCAGTGGCACGGATACGGTGAACGTTGAGACCGATGCCACCAGC 18395 Query 105852 CCACTTACTGATACGCGCACACTCTTTTACTGTATCGTAAATACCGTCGATACTATCTTC 105911 | || ||| ||||| || | || || |||||||| || ||||| || || Sbjct 18396 CATTTTGGAGATCATGGCACAGGTCTTGAGGGTGTCATAAATACCCTCAATACTGTCCTC 18455 Query 105912 CTTATTCGCAATCAGGAAACACGATGACATTTGTGGTCTG-GGTGTACCAGCATTGAACA 105970 ||| | | | |||||| || || |||| || || ||| || |||||||| ||||| | Sbjct 18456 CTTCATGTCGACCAGGAAGCATGAAGACAGCTG-GGGCTGAGGAGTACCAGCGTTGAAGA 18514 Query 105971 GAGTTGGTGTTGCATGAATGAACAAACCTT--TCGATAACGCTTCGTATGTTTCCAGGAC 106028 | || || | ||||| |||| || ||| | || | | ||| || || ||||| Sbjct 18515 GTGTGGGAGAAGCATGTGTGAAGAA--CTTCATGGACATGAGGTTGTAGGTCTCGAGGAC 18572 Query 106029 GTGATCAATATCGTGTCCATGAATACCAATAGCGACGCGCATATAGAGATATTGGGGTGT 106088 | ||||| | || || ||||| | || ||| |||||| | | || ||| Sbjct 18573 ACGCTCAATGTTGTCACCCCAGATACCGACAGAGACACGCATAATCATGTGCTGCGGTCG 18632 Query 106089 TTCAATAATTTCACCGTCAATTTTCTGGAGATA 106121 |||| ||| | ||| ||||| || |||| || Sbjct 18633 CTCAACAATCTTACCATCAATCTTGAGGAGGTA 18665 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635122161525600