Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calonectria_20pseudonaviculata_20[genbank_20GCA_5F001696505.1_202016 -07-28] 1,340 sequences; 51,439,042 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq907 185 1e-41 seq1125 149 7e-31 seq1283 96.9 4e-15 seq1157 95.1 1e-14 >seq907 Length=75695 Score = 185 bits (204), Expect = 1e-41 Identities = 1012/1599 (63%), Gaps = 51/1599 (3%) Strand=Plus/Plus Query 109500 GTTCATCGACTGAGACTGATCGATGAATCGACCACGATCAGCCGCCATGTCGATGATACA 109559 ||||| || || ||||| || ||||| || || || || ||||| | || || Sbjct 16998 GTTCAGAGATTGGGACTGGTCAATGAAAGCGCCTCGGTCGGCAGCCATCTGGAC----CA 17053 Query 109560 CTTTTGGCTA----ATTTCCCAGACAGTCTTGTACAAATTCTTGATATCATCGGGAATGT 109615 ||| ||| || |||||||| |||||||| | | ||| | |||| | ||||| | Sbjct 17054 CTTGACGCTGGGAGATCTCCCAGACGGTCTTGTAGAGAGCCTTAACATCAGCAGGAATAT 17113 Query 109616 CCACGATGTTTTGAATAGAGCCACCAGCCTTCACCATGA---GATCCTTCATCTCTTTCG 109672 || || |||||||| ||| ||| | |||| | | ||||| | | | Sbjct 17114 TGGGAATATTCTGAATAGA---ACCGTCCTCGGCGATGATTCGGTTTTTCATGGCATCAG 17170 Query 109673 ACCAGAGACCGACCTTTTTGAGATCGTCAACAAGATGCTTGTTGACCACGACAAATTCAC 109732 |||| || || | | ||||| | || ||| |||||| || || |||| Sbjct 17171 ACCAAAGCCCCATGTCGACAAGATCCTTAAGAAGCCAGGGGTTGACGACCTGGAACTCAC 17230 Query 109733 CAGCAAGTGTGCGTCGGAGGTAGATGTTAGTCGTGTAGGGTTCGAAACACTCATTGTTGC 109792 |||| | || || ||| ||||| | ||||| || |||||||| || ||||| | Sbjct 17231 CAGCCAAGACACGACGTGAGTATATGTTGGATGTGTAAGGCTCGAAACATTCGTTGTTAC 17290 Query 109793 CTAGGATTTGTGCAGTGGAAGCTGTGGGCATGGGAGCCATGAGAAGACTGTTTCGGAGAC 109852 | | || || | || || || |||||||| |||||||| |||||||| |||| | Sbjct 17291 CCAAAATCTGAGAGGTACTGGCAGTAGGCATGGGCGCCATGAGCAGACTGTTACGGATGC 17350 Query 109853 CCTTCGTCTTTACCCGCTCACGCATTGCGTCCCAATCATAACGACCACTAAATTTAGTCT 109912 | | | ||| ||| ||||||| | | ||||| || | || || | | || | Sbjct 17351 CGTGCTCCTTGACCTGCTCACGGAGGGATTCCCAGTCCCA--GAGGTCTGA---TGGTTT 17405 Query 109913 CACCATCCCACATATCTGGTTGAAGTACACCCTCAGCAGCAGGAGAACCCTTGAAACTCT 109972 ||| || |||||| || || || | |||||||| | ||| || |||||||| | Sbjct 17406 CAC-ATTCCACATGTCGAACTGGAGAATACCCTCAGAGGTAGGGGAGCCCTTGAAGGTAG 17464 Query 109973 CGTACGACCCCTCAACCTCGGCCAACTCGGATGAAGCCTCTAGTGCCGCATGATACATAG 110032 ||| | ||||| ||| || || || | ||| || || || || ||||| |||| Sbjct 17465 AGTAGGGACCCTCCTCCTTGGACAGCTGGACTGAGGCAGTCAGGGCGGCGTGATAGATAG 17524 Query 110033 TCTCAAAAATATGAGCATTCATGAGGCGAGACTCTTCACAGTCGAAGGGAA----GACCA 110088 | ||||| || || |||| |||| || | ||||| || | || Sbjct 17525 TTTCAAAGATCTGTTTGTTCAGTTCACGAGCTTCGGGGGACTCGAAAGGCATGCGGAGGG 17584 Query 110089 CAAAGAATAAACACATCCGCTAGACCCTGAACACCGAGACCAATGGGGCGATGCTTCATG 110148 ||| |||| ||||||| |||||||| ||||| | ||||||||| || || |||| Sbjct 17585 CAAGGAATG----CATCCGCAAGACCCTGGACACCAACACCAATGGGTCGGTGACGCATG 17640 Query 110149 TTAGAGCGTCGAGCAGTTTCTACGGGGTAAAAGTTGCGGTCGATGACCCGATTGAGATTC 110208 || | ||||| | || || || |||| ||| |||| | || || || Sbjct 17641 TTGCTGTTACGAGCCTCCTGAACAGGATAGTGGTTGACGTCAATGATCTTGTTAAGGTTG 17700 Query 110209 TTCGTCACAGTCTTCGTGATTTCATGGAGTTTGTCGTAATCGAACGTTTTCGTCTCCTTA 110268 ||||||| |||| || || ||||| | | | || | | || | | || Sbjct 17701 CGAACGACAGTCTGAGTGACATCGTGCAGTTTTTGGAAGTCATA-GCAATCATTGCTGTA 17759 Query 110269 TTGA-CATATTTGGGGAGAGCAATAGACGCAAGATTGCACACAGAAGTCTCGTCTTTGTC 110327 | | || | || || || | || || || ||||| || | ||| || | Sbjct 17760 GTCAACAAAAGAAGGAAGGGCCAGGGAAGCGAGGTTGCAGACGGCGACCTCATCAGGAGC 17819 Query 110328 GGTGTATTCCAAAATTTCCGTACACAAGTTGGAACTCTTAATGACACCCAAGTTCTTCTG 110387 | ||||||| | || || || || | ||||||||| || ||| | ||||||||| Sbjct 17820 GCTGTATTCGATGATCTCAGTGCAAAGGTTGGAACTGCGGATAGTACCGAGGTTCTTCTG 17879 Query 110388 ATTCGATTTGGAGTTG-CATGCATCCTTATAGAGCATGTATGGGGTACCAGTTTCCGTCT 110446 || ||| |||| | || |||||| || |||||| | ||| | |||||||| |||| Sbjct 17880 GTTACTCTTGCGGTTGGCGTG-ATCCTTGTAAAGCATGAAGGGGTTGCCAGTTTCGGTCT 17938 Query 110447 GTGACTTGAGAATGGCCTTCCATACATCGGCGGCGGGGACAGT--TGCGTTAGCGAGACC 110504 | | || ||||||||| | ||| | | ||| | || |||| | | || Sbjct 17939 GAGCCTCGAGAATGGCGTACCAGAGCTTTTGGGCCTTCATGGTCTTGCG--ACCTTTGCC 17996 Query 110505 TTCCTCCTCGTACTTGGTGTACAAGTCCTCAAATTCCTGTCCGTACACATCAGAAAGACC 110564 ||| |||||| | ||| | ||||||| || | || || |||| |||||| Sbjct 17997 GGCCTTCTCGTAGCTCTCGTAGAGAGCCTCAAACTCATCGCCATAGCAGTCAGCAAGACC 18056 Query 110565 CTTCGCCTTGTCGGGACAGAAGAGGGACCAATTTCCACCCTCCTCAACCCTCTTCATGAA 110624 || || |||||| | || | ||| | || || ||| || | ||||||||| Sbjct 18057 AGGGCACTCGTTGGGACACATTAGAGTCCAGTCGCCGTTCTTCTCCACACGCTTCATGAA 18116 Query 110625 CAGGTCAGGAATCCACATCGCCGAGAAAAGGTCACGGCAACGAGCCTCTTCATCACCTTG 110684 || || || ||||||| || ||| |||||||| ||| |||| || | || || Sbjct 18117 CAAATCGGGGATCCACAGAGCGAGGAACAGGTCACGAGCACGGACCTCCTCCTTTCCATG 18176 Query 110685 GTTGAGGCGTAGCTCCAAAAAGTCCATGATATCCGAGTGCCATGGTTCGAGATAGACAGC 110744 ||| ||| || |||| ||| || | | || | |||||| || ||||| |||| || Sbjct 18177 GTTCTTGCGAAGATCCAGAAATTCGAATACGTCGGCGTGCCAAGGCTCGAGGTAGATGGC 18236 Query 110745 GA------TGGATCCCTTACGACGACCCGCCTGGTTAACATAGCGTGCTGTGGCATTGAA 110798 || || || ||| | | || |||| | |||||| || || ||| ||||| Sbjct 18237 GAAAGCACCGGGTCGCTT--GTTG-CCACCCTGATCAACATATCGAGCAGTGTTGTTGAA 18293 Query 110799 GACCCTGAGCATAGGAATAATTCCATCGGATTGACCATTTGTACCCCTAATTCTGGACTT 110858 || | |||||| || | | || | ||| ||| || ||||| ||| || Sbjct 18294 TACACGGAGCATGGGTGTCACACCGTTGGAGGTACCGTTGGTACCGGCAATATAAGAGCC 18353 Query 110859 ATTGGCACGAATGTCGTGGATATGCATACCAATACCACCCGCCCACTTACTAATTTGTGC 110918 | ||||||| || ||| | | | ||| || ||||| ||| || || || Sbjct 18354 AGTGGCACGGATACGGTGAACGTTGAGACCGATGCCACCAGCCATTTTGGAGATCATGGC 18413 Query 110919 ACA-CTCTGTGAGTGTACCATAAATACCATCAATCGAATCTGCCTTGTTGGCAATTAGAA 110977 ||| ||| |||| || |||||||||| ||||| || |||| || | | || | Sbjct 18414 ACAGGTCT-TGAGGGTGTCATAAATACCCTCAATACTGTCCTCCTTCATGTCGACCAGGA 18472 Query 110978 AGCAAGAAGACATCTGAGGACGAGGCGTTCCCGCATTGAAGAGTGTAGGTGTCGCATGAA 111037 |||| ||||||| ||| || |||| || || || ||||||||||| || | ||||| Sbjct 18473 AGCATGAAGACAGCTGGGGCTGAGGAGTACCAGCGTTGAAGAGTGTGGGAGAAGCATGTG 18532 Query 111038 TGAACAGACCTT--GGGACATCTTGTTGTATGTGTCGAG 111074 ||| ||| ||| |||||| |||||| || ||||| Sbjct 18533 TGA--AGAACTTCATGGACATGAGGTTGTAGGTCTCGAG 18569 >seq1125 Length=136914 Score = 149 bits (164), Expect = 7e-31 Identities = 268/383 (70%), Gaps = 18/383 (5%) Strand=Plus/Plus Query 11536 TCAAGAATATCGACACGGTTTGTAGCGGCAATGACTACAA--TGCCAGTCTCAT-TGTCG 11592 ||||| || || | || || ||| |||| | ||| |||| ||| |||| ||| | Sbjct 3677 TCAAGCATGTCCGCTCGATTGGTACCGGCCAGGACAACAACTTGC---TCTCGCGTGTTG 3733 Query 11593 AAACCGTCCATTTCTGTGAGAAGCTGGTTGATCGTCTGTTCACGCTCATCGTTGG----- 11647 || |||||||| || || |||| ||||||| || |||||||||||||||| Sbjct 3734 AAGCCGTCCATCTCAGTAAGAATTTGGTTGAGAGTGGCTTCACGCTCATCGTTGCCACCA 3793 Query 11648 -AGGGCATACCACCTGCCGAACGCTTCTT-ACCGACAGCGTCAATCTCATCGATGAATAC 11705 | | ||||| || ||| | || ||| | |||||| || ||||||||||| | Sbjct 3794 AAACCCCGACCACTCTCCTGACG-TGCTCGACCAATAGCGTCGATTTCATCGATGAAAAT 3852 Query 11706 GATACACGGTTGGTTGGCACGTGCCTGTTCGAAAAGTTCACGTACACGCTTCGCTCCAAC 11765 || || || ||| ||| | | |||| || || ||||| || | ||||| Sbjct 3853 AATGCAAGGGGCGTTCTTACGACCTTCAGCGAATAGGTCCCGTACTCGGGAAGGACCAAC 3912 Query 11766 ACCTACGAACATCTCAACGAAGTTTG--CGGCAGAACACTGAATGAAGGGAACATTAGAC 11823 ||| ||||||||||| ||||| | | | || | ||||||| ||||||||| |||| Sbjct 3913 ACCAACGAACATCTCGACGAACTCGGAACCGCTCA-CACTGAA-GAAGGGAACGCCAGAC 3970 Query 11824 TCACCAGCGATGGCTCGAGCGAGGAGAGTCTTACCCGTACCAGGTGCACCAGCGAGAAGG 11883 ||||| || |||| ||||| || |||||||| |||||||||| ||||| |||| | Sbjct 3971 TCACCGGCAGTGGCCTTGGCGAGCAGCGTCTTACCAGTACCAGGTGGGCCAGCAAGAATG 4030 Query 11884 GCGCCACGGGGGATCTTGGCACC 11906 || || ||||| ||||||||||| Sbjct 4031 GCACCTCGGGGAATCTTGGCACC 4053 >seq1283 Length=160794 Score = 96.9 bits (106), Expect = 4e-15 Identities = 181/266 (68%), Gaps = 0/266 (0%) Strand=Plus/Minus Query 11737 AAAAGTTCACGTACACGCTTCGCTCCAACACCTACGAACATCTCAACGAAGTTTGCGGCA 11796 || ||||| || || ||||| || || ||||| || || ||||| | || | || Sbjct 18501 AACAGTTCGCGAACTCGCTTGGCCCCGACACCAACAAAGATCTCGTCAAACTCACTACCA 18442 Query 11797 GAACACTGAATGAAGGGAACATTAGACTCACCAGCGATGGCTCGAGCGAGGAGAGTCTTA 11856 || | | ||| || || || || ||||| | ||||| ||||| || |||||| Sbjct 18441 GACATGTAGAAGAAAGGTACTCCAGCTTCGCCAGCAACAGCTCGTGCGAGAAGCGTCTTA 18382 Query 11857 CCCGTACCAGGTGCACCAGCGAGAAGGGCGCCACGGGGGATCTTGGCACCACTTCCAAAG 11916 || || ||||| | ||| | | |||| | || ||| | |||||||||| || | Sbjct 18381 CCAGTTCCAGGGGGTCCAACTAAAAGGACACCCTTGGGCAGCTTGGCACCAAGATCAGAA 18322 Query 11917 TAGCGCTCAGGCTTCTTGAGGAAGTCCACAATCTCCTCAAGTTCCTCCTTGGCGGAGTCG 11976 | ||||| ||||||||||| || |||| ||||| ||| || ||||| || |||| Sbjct 18321 AACTTTTCAGGGTTCTTGAGGAACTCAACAACCTCCTGAAGCTCTTCCTTAGCCTCGTCG 18262 Query 11977 ATACCCTCAACATCGGTGAAACGAGT 12002 ||| | ||||||| |||| || || Sbjct 18261 CAACCGTGAACATCGTTGAATCGGGT 18236 >seq1157 Length=14967 Score = 95.1 bits (104), Expect = 1e-14 Identities = 341/520 (66%), Gaps = 19/520 (4%) Strand=Plus/Minus Query 119208 TAGTCACCCACCCTCTTTTCGAAGAAATTCGTCTTACCATCGAGTGAGATGTTTTCCATA 119267 || ||||| || | ||| || ||||| || ||||||||| |||| ||||| || ||||| Sbjct 11145 TAATCACCTACACGCTTCTCAAAGAAGTTAGTCTTACCACCGAGGGAGATATTCTCCATG 11086 Query 119268 AAGTCAAAAGGATTTTTGGAGTTCCAGAT-TGGTGGTTGACCAACTTGTTTCAGAAGACG 119326 ||||| || || || | || || ||| | | ||| ||||| |||||||| Sbjct 11085 AAGTCGAAGGGGTTGGTAGACTTGTAGACCTTCTCGTT-ACCAAGAGCGACAAGAAGACG 11027 Query 119327 ATCGGAGACATACTCGATATATTCGGACATCTTTTCCGAATTCATACCTATGAGATTACA 119386 |||| || ||||||| || | ||| ||||| |||||||| | ||| ||| Sbjct 11026 GTCGGCAACGAACTCGATGTACTGCTTCATAAGATCCGAGTTCATACCAAGCAGAGCACA 10967 Query 119387 CGGGAGAGCATCGAGGATGAAGTTCTTCTCGATCTCCACAGCTTCTTTCACGATGGAGTG 119446 || | || ||| | ||| | ||| ||||| || || || | | |||| || Sbjct 10966 AGGCAATGCCTCGGTCAGGAATTCCTTTTCGATAGAGACGGCATCAGTAATGATGTCCTG 10907 Query 119447 AATAGTTTCTG-TCGATGGTTTGTTTCTCAAGA---GTTTAAACAACTCTACGGCAAATT 119502 ||| | ||| | | ||| | || ||| | | || || | || || | Sbjct 10906 AAT--TACCTGCTTGCTGGCACGGCCCTTGAGATGAGAGTGAAGAAGGCAT--GCGAAGT 10851 Query 119503 CTTGATGAAGCCCTTCATCCCGAGAGATGAGCTCATTACTGAAGCAAAGTCCAGGCATGA 119562 | ||||| || ||||| |||||||||||||||||| |||| | |||||||| | Sbjct 10850 CAGTGTGAAGACCCTCATCACGAGAGATGAGCTCATTAGAGAAGGTTAAACCAGGCATAA 10791 Query 119563 GTCCTCTTTTCTTTAGCCAAAAGATGGCA-CAAAAACTTC-CAGAAAAGAAGATGCCCTC 119620 | |||| ||||| | ||| ||||| | | | || | | | |||| || || ||||| Sbjct 10790 GACCTCGCTTCTTCAACCAGAAGATAGAAGCGAATGCACCGCTGAAA--AATATACCCTC 10733 Query 119621 CACACAGGCGAAAGCGAATAGACGCTCAGCAAAAGGTCG-AGACTTGTC---GAACCACT 119676 ||| ||||| || | ||||| | ||| |||||| | |||||| || |||| Sbjct 10732 GACAGCAGCGAATGCAACGAGACGTTGAGC-AAAGGTGGCCTGCTTGTCCGAGATCCACC 10674 Query 119677 TGAGAGCCCAGTTGGCCTTACGCTCTATGCAGGGGACAGT 119716 |||| ||||| | ||||| || ||||| ||||| || Sbjct 10673 TGAGGGCCCACTCTGCCTTTTTCTTGATGCACGGGACTGT 10634 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588966134652000