Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calonectria_20pseudonaviculata_20[genbank_20GCA_5F001696505.1_202016 -07-28] 1,340 sequences; 51,439,042 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq1144 170 4e-37 seq732 152 1e-31 seq897 102 2e-16 >seq1144 Length=167757 Score = 170 bits (188), Expect = 4e-37 Identities = 163/209 (78%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 ||||||||||| |||||||| || ||||| |||||||| | || |||| ||||| || Sbjct 92101 ACAAGGTGAAGGGTGGACTCCTTCTGAATGTTGTAATCAGAGAGGGTTCGGCCATCCTCA 92042 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 |||||||| || ||||| || ||||| || ||||| |||||||| || || || || || Sbjct 92041 AGCTGCTTTCCGGCGAAAATGAGTCGCTGCTGGTCCGGAGGAATTCCCTCCTTATCCTGG 91982 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || ||| ||||| ||||| ||||| || || || |||||||||| ||||||| Sbjct 91981 ATCTTCGACTTAACGTTGTCAATAGTGTCGGATGACTCGACCTCAAGGGTAATCGTCTTT 91922 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || |||||||| || || || | |||||| Sbjct 91921 CCAGTCAAAGTCTTCACAAAGATTTGCAT 91893 >seq732 Length=233276 Score = 152 bits (168), Expect = 1e-31 Identities = 159/209 (76%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || ||||| |||||| ||| || || || ||||| ||| || || | ||||| ||| Sbjct 60361 ACCAGGTGGAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCG 60420 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 ||||||||||| || ||||||||||| || ||||| || |||||||| || ||||| || Sbjct 60421 AGCTGCTTACCAGCAAAGATAAGTCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGG 60480 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || ||||||||| || |||||||| ||| ||||| |||||||| | |||||| Sbjct 60481 ATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATCGTCTTC 60540 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || | || || ||||| | ||||| Sbjct 60541 CCCGTGAGGGTCTTGACGAAGATCTGCAT 60569 >seq897 Length=151945 Score = 102 bits (112), Expect = 2e-16 Identities = 130/179 (73%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 194953 TTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCTGCGAAGATA 195012 || || || ||||| |||| || || | ||||| ||||| ||||| || || ||||| Sbjct 73701 TTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCCTCGAGTTGCTTGCCAGCAAAGATC 73642 Query 195013 AGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCA 195072 || || || ||||| || ||||| || || ||||| || || || |||||| || || Sbjct 73641 AGGCGCTGCTGGTCCGGGGGAATACCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCG 73582 Query 195073 ATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAA 195131 ||||||||||| || || |||||||| | ||||| || || | || || ||||| Sbjct 73581 ATGGTGTCCGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTGAGGGTCTTCACGAA 73523 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109462551587780