Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calonectria_20pseudonaviculata_20[genbank_20GCA_5F001696505.1_202016 -07-28] 1,340 sequences; 51,439,042 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq1144 104 2e-17 seq732 98.7 6e-16 >seq1144 Length=167757 Score = 104 bits (114), Expect = 2e-17 Identities = 146/205 (71%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 34778 GTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTG 34837 ||||| ||| || ||||||||||| || || || ||| |||| |||| || ||||| Sbjct 92096 GTGAAGGGTGGACTCCTTCTGAATGTTGTAATCAGAGAGGGTTCGGCCATCCTCAAGCTG 92037 Query 34838 TTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTT 34897 |||||||| || || ||||| |||||||| | || | |||||||| || ||||| Sbjct 92036 CTTTCCGGCGAAAATGAGTCGCTGCTGGTCCGGAGGAATTCCCTCCTTATCCTGGATCTT 91977 Query 34898 CTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGT 34957 | || ||| | || | || | ||| || || | ||| || || ||||| || Sbjct 91976 CGACTTAACGTTGTCAATAGTGTCGGATGACTCGACCTCAAGGGTAATCGTCTTTCCAGT 91917 Query 34958 GAGAGTCTTCACAAAGATCTGCATA 34982 | ||||||||||||||| |||||| Sbjct 91916 CAAAGTCTTCACAAAGATTTGCATA 91892 Score = 100 bits (110), Expect = 2e-16 Identities = 148/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||| ||| | ||| || ||||||||||| || || || || |||| |||| || Sbjct 91873 ACCAGGTGGAGGGTGGACTCCTTCTGAATGTTGTAATCAGAGAGTGTTCGGCCATCCTCA 91814 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 ||||| |||||||| || || ||||| |||||||| | || | |||||||| || Sbjct 91813 AGCTGCTTTCCGGCGAAAATGAGTCGCTGCTGGTCCGGAGGAATTCCCTCCTTATCCTGG 91754 Query 34893 ATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTT 34952 |||||| || ||| | || | || | ||| || |||| ||| || || || Sbjct 91753 ATCTTCGACTTAACGTTGTCAATAGTGTCGGACGACTCCACCTCGAGGGTAATAGTCTTG 91694 Query 34953 CCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 || ||||||||||| || || ||||||||| Sbjct 91693 CCAGTGAGAGTCTTGACGAAAATCTGCATA 91664 >seq732 Length=233276 Score = 98.7 bits (108), Expect = 6e-16 Identities = 149/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||| ||| | ||||| || ||||| ||||| ||||| ||| | || |||| || Sbjct 60361 ACCAGGTGGAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCG 60420 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 ||||| || || ||||| || ||||| |||||||| | || | ||||||||||| Sbjct 60421 AGCTGCTTACCAGCAAAGATAAGTCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGG 60480 Query 34893 ATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTT 34952 ||||| |||||| | || | || | ||| || || | ||| || || || Sbjct 60481 ATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATCGTCTTC 60540 Query 34953 CCCGTGAGAGTCTTCACAAAGATCTGCATATT 34984 |||||||| ||||| || ||||||||||| || Sbjct 60541 CCCGTGAGGGTCTTGACGAAGATCTGCATCTT 60572 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324628298327520