Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Calonectria_20pseudonaviculata_20[genbank_20GCA_5F001696505.1_202016
-07-28] 1,340 sequences; 51,439,042 total letters
Query= NC_015960.1
Length=175699
Score E
Sequences producing significant alignments: (Bits) Value
seq1157 89.7 6e-13
>seq1157
Length=14967
Score = 89.7 bits (98), Expect = 6e-13
Identities = 109/149 (73%), Gaps = 0/149 (0%)
Strand=Plus/Minus
Query 18961 CATGCAAAATCACAATGTAGTCCCTCGTCTCTACTTATCAATTCATTAGAAAATGTTAAA 19020
||||| || ||| || || ||||| || | | || | |||||||| || ||||||
Sbjct 10860 CATGCGAAGTCAGTGTGAAGACCCTCATCACGAGAGATGAGCTCATTAGAGAAGGTTAAA 10801
Query 19021 CCAGGCATCAGTCCTCttttttttAACCAGAATATAGAAGCAAATGATCCAGAAAAGAAT 19080
|||||||| || |||| || || |||||||| |||||||| |||| || || |||
Sbjct 10800 CCAGGCATAAGACCTCGCTTCTTCAACCAGAAGATAGAAGCGAATGCACCGCTGAAAAAT 10741
Query 19081 ATACCTTCTACTGCTGCAAAAGCAACTAG 19109
||||| || || || || || ||||| ||
Sbjct 10740 ATACCCTCGACAGCAGCGAATGCAACGAG 10712
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 562099384677600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |