Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Calonectria_20pseudonaviculata_20[genbank_20GCA_5F001696505.1_202016
-07-28] 1,340 sequences; 51,439,042 total letters
Query= NC_016072.1
Length=1259197
Score E
Sequences producing significant alignments: (Bits) Value
seq1144 113 4e-19
>seq1144
Length=167757
Score = 113 bits (124), Expect = 4e-19
Identities = 159/221 (72%), Gaps = 2/221 (1%)
Strand=Plus/Minus
Query 563256 GAGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCT 563315
||| ||||| || || || ||||| || || ||| |||||||||| || ||||
Sbjct 91883 GAGGCGGAGGACCAGGTGGAGGGTGGACTCCTTCTGAATGTTGTAATCAGAGAGTGTTCG 91824
Query 563316 TGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTC 563375
||| ||||| || |||||||| ||||| |||| ||||| || ||||||||||| ||
Sbjct 91823 GCCATCCTCAAGCTGCTTTCCGGCGAAAATGAGTCGCTGCTGGTCCGGAGGAATTCCCTC 91764
Query 563376 TTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACA-TTCGAGAG 563434
||||| || || || || || ||||| || || | || | || ||||| |
Sbjct 91763 CTTATCCTGGATCTTCGACTTAACGTTGTCAATAGTGTC-GGACGACTCCACCTCGAGGG 91705
Query 563435 TAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCATA 563475
||| ||| || ||||| ||||| || |||||||| ||||||
Sbjct 91704 TAATAGTCTTGCCAGTGAGAGTCTTGACGAAAATCTGCATA 91664
Score = 107 bits (118), Expect = 2e-17
Identities = 158/221 (71%), Gaps = 2/221 (1%)
Strand=Plus/Minus
Query 563256 GAGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCT 563315
||||||||| ||||| |||||||| || || ||| |||||||||| || ||||
Sbjct 92111 GAGACGGAGGACAAGGTGAAGGGTGGACTCCTTCTGAATGTTGTAATCAGAGAGGGTTCG 92052
Query 563316 TGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTC 563375
||| ||||| || |||||||| ||||| |||| ||||| || ||||||||||| ||
Sbjct 92051 GCCATCCTCAAGCTGCTTTCCGGCGAAAATGAGTCGCTGCTGGTCCGGAGGAATTCCCTC 91992
Query 563376 TTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACA-TTCGAGAG 563434
||||| || || || || || ||||| || || | ||| | | || || |
Sbjct 91991 CTTATCCTGGATCTTCGACTTAACGTTGTCAATAGTGTC-GGATGACTCGACCTCAAGGG 91933
Query 563435 TAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCATA 563475
||| || || ||||| | ||| || || || |||||||||
Sbjct 91932 TAATCGTCTTTCCAGTCAAAGTCTTCACAAAGATTTGCATA 91892
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 4029225134756600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |