Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calonectria_20pseudonaviculata_20[genbank_20GCA_5F001696505.1_202016 -07-28] 1,340 sequences; 51,439,042 total letters Query= NC_017940.1 Length=127732 Score E Sequences producing significant alignments: (Bits) Value seq881 104 2e-17 >seq881 Length=186784 Score = 104 bits (114), Expect = 2e-17 Identities = 190/272 (70%), Gaps = 6/272 (2%) Strand=Plus/Plus Query 30115 AGCTGATCCACCCCCATCCCCGAGTAGTCTGCCCTCATGTCCGTGTACTCTGCTCCGAAA 30174 ||||| || || ||| |||| ||| || | | | ||| ||||||||| || || Sbjct 108324 AGCTGGTCGACTCCCTGGCCCGTGTAATCCGTCTTGTAGTCGACGTACTCTGCGCCAAAG 108383 Query 30175 TGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAGCCC 30234 |||| ||||||||| ||||| || || || ||||| ||||| || | ||| |||||| Sbjct 108384 TGCCGCCACTGGAAGCCGTAAACAGGGCCGAGGTCGCCCTCCTCACGGTGTGTCAAGCCC 108443 Query 30235 CTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTCG--G 30292 || || | || || | ||| || || | ||||| ||||| | ||| |||| | Sbjct 108444 AGGTTATCGAGGAATTCGCGGGATCCATTTCCATCCCAAATCTTGATCCCAGCCTCGCTG 108503 Query 30293 AGAGCTCTTTGGAGTT-TGTGGACCCTCTGACGAACCACAGCAGCTCCTCCACGACGGCC 30351 ||||| ||| | || | ||| | ||||| || |||||| || || ||| | | |||||| Sbjct 108504 AGAGC-CTTGGAAGATGTGTTG-CCCTC-GATGAACCAGAGTAGTTCCGCAATGACGGCT 108560 Query 30352 TTCCAAAAGACCCTCTTGGTCGTGAGGAGGGG 30383 | ||| || | ||| || ||||||||||| Sbjct 108561 CTGGTAAAAACTCGCTTCGTGGTGAGGAGGGG 108592 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 408610926763820