Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Calonectria_20pseudonaviculata_20[genbank_20GCA_5F001696505.1_202016
-07-28] 1,340 sequences; 51,439,042 total letters
Query= NC_017940.1
Length=127732
Score E
Sequences producing significant alignments: (Bits) Value
seq881 104 2e-17
>seq881
Length=186784
Score = 104 bits (114), Expect = 2e-17
Identities = 190/272 (70%), Gaps = 6/272 (2%)
Strand=Plus/Plus
Query 30115 AGCTGATCCACCCCCATCCCCGAGTAGTCTGCCCTCATGTCCGTGTACTCTGCTCCGAAA 30174
||||| || || ||| |||| ||| || | | | ||| ||||||||| || ||
Sbjct 108324 AGCTGGTCGACTCCCTGGCCCGTGTAATCCGTCTTGTAGTCGACGTACTCTGCGCCAAAG 108383
Query 30175 TGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAGCCC 30234
|||| ||||||||| ||||| || || || ||||| ||||| || | ||| ||||||
Sbjct 108384 TGCCGCCACTGGAAGCCGTAAACAGGGCCGAGGTCGCCCTCCTCACGGTGTGTCAAGCCC 108443
Query 30235 CTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTCG--G 30292
|| || | || || | ||| || || | ||||| ||||| | ||| |||| |
Sbjct 108444 AGGTTATCGAGGAATTCGCGGGATCCATTTCCATCCCAAATCTTGATCCCAGCCTCGCTG 108503
Query 30293 AGAGCTCTTTGGAGTT-TGTGGACCCTCTGACGAACCACAGCAGCTCCTCCACGACGGCC 30351
||||| ||| | || | ||| | ||||| || |||||| || || ||| | | ||||||
Sbjct 108504 AGAGC-CTTGGAAGATGTGTTG-CCCTC-GATGAACCAGAGTAGTTCCGCAATGACGGCT 108560
Query 30352 TTCCAAAAGACCCTCTTGGTCGTGAGGAGGGG 30383
| ||| || | ||| || |||||||||||
Sbjct 108561 CTGGTAAAAACTCGCTTCGTGGTGAGGAGGGG 108592
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 408610926763820
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |