Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Calonectria_20pseudonaviculata_20[genbank_20GCA_5F001696505.1_202016
-07-28] 1,340 sequences; 51,439,042 total letters
Query= NC_018875.1
Length=119082
Score E
Sequences producing significant alignments: (Bits) Value
seq1144 105 5e-18
seq732 91.5 1e-13
>seq1144
Length=167757
Score = 105 bits (116), Expect = 5e-18
Identities = 145/203 (71%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 48564 TGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGC 48623
|| || ||| ||| || ||||| ||||||||||| || |||| | || || | ||||
Sbjct 92095 TGAAGGGTGGACTCCTTCTGAATGTTGTAATCAGAGAGGGTTCGGCCATCCTCAAGCTGC 92036
Query 48624 TTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTT 48683
|| ||||| || || |||||||| || |||| |||| |||||||| || |||||
Sbjct 92035 TTTCCGGCGAAAATGAGTCGCTGCTGGTCCGGAGGAATTCCCTCCTTATCCTGGATCTTC 91976
Query 48684 TGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTC 48743
|| || | | || || || | ||| ||||| | |||||||| ||||| |||
Sbjct 91975 GACTTAACGTTGTCAATAGTGTCGGATGACTCGACCTCAAGGGTAATCGTCTTTCCAGTC 91916
Query 48744 AAAGTTTTTACAAAAATCTGCAT 48766
||||| || ||||| || |||||
Sbjct 91915 AAAGTCTTCACAAAGATTTGCAT 91893
Score = 102 bits (112), Expect = 6e-17
Identities = 148/209 (71%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 48558 ACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCC 48617
|||| || || ||| ||| || ||||| ||||||||||| || |||| | || ||
Sbjct 91873 ACCAGGTGGAGGGTGGACTCCTTCTGAATGTTGTAATCAGAGAGTGTTCGGCCATCCTCA 91814
Query 48618 AACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTA 48677
| |||||| ||||| || || |||||||| || |||| |||| |||||||| ||
Sbjct 91813 AGCTGCTTTCCGGCGAAAATGAGTCGCTGCTGGTCCGGAGGAATTCCCTCCTTATCCTGG 91754
Query 48678 ATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTT 48737
||||| || || | | || || |||| ||||||||| | ||||| || ||
Sbjct 91753 ATCTTCGACTTAACGTTGTCAATAGTGTCGGACGACTCCACCTCGAGGGTAATAGTCTTG 91694
Query 48738 CCCGTCAAAGTTTTTACAAAAATCTGCAT 48766
|| || | ||| || || |||||||||||
Sbjct 91693 CCAGTGAGAGTCTTGACGAAAATCTGCAT 91665
>seq732
Length=233276
Score = 91.5 bits (100), Expect = 1e-13
Identities = 148/213 (69%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 48558 ACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCC 48617
|||| || || |||||||| || || || ||||| || || | || | || ||
Sbjct 60361 ACCAGGTGGAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCG 60420
Query 48618 AACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTA 48677
| ||||||||| ||||| || |||||||| || |||| ||||| ||||||||||||
Sbjct 60421 AGCTGCTTACCAGCAAAGATAAGTCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGG 60480
Query 48678 ATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTT 48737
||||| || || | | | || || | ||||||||| | || ||||| ||
Sbjct 60481 ATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATCGTCTTC 60540
Query 48738 CCCGTCAAAGTTTTTACAAAAATCTGCATCGTG 48770
||||| | || || || || ||||||||| ||
Sbjct 60541 CCCGTGAGGGTCTTGACGAAGATCTGCATCTTG 60573
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 380931378812820
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |