Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calonectria_20pseudonaviculata_20[genbank_20GCA_5F001696505.1_202016 -07-28] 1,340 sequences; 51,439,042 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq907 315 1e-80 seq1157 89.7 1e-12 >seq907 Length=75695 Score = 315 bits (348), Expect = 1e-80 Identities = 923/1395 (66%), Gaps = 53/1395 (4%) Strand=Plus/Plus Query 212907 GGGTTGACTATCTGGAAGTCACCTGAGAGCACCCTCCTCTGGTAAAAGTTTGAAGTGTAG 212966 |||||||| | |||||| ||||| | | || | | ||| | ||| || ||||| Sbjct 17209 GGGTTGACGACCTGGAACTCACCAGCCAAGACACGACGTGAGTATATGTTGGATGTGTAA 17268 Query 212967 GGCTCGATGCTCTCGTTGTTCCCCAGAATCTGTGCAGTGCTGGCTGTGGGCATGGGAGCC 213026 ||||||| | |||||||| |||| |||||| | || ||||| || |||||||| ||| Sbjct 17269 GGCTCGAAACATTCGTTGTTACCCAAAATCTGAGAGGTACTGGCAGTAGGCATGGGCGCC 17328 Query 213027 ACCAGGAGACTGTTCCTCACTCCGTGCTCGCCGATGAGGCGCCGAAGCTCTGCCCAGTCC 213086 | || |||||||| | | |||||||| || | || || | |||||||| Sbjct 17329 ATGAGCAGACTGTTACGGATGCCGTGCTCCTTGACCTGCTCACGGAGGGATTCCCAGTCC 17388 Query 213087 CATCTGCCAGACAGGTCCTCGTCCTTCACGTTCCACATGTCAAACTGCAAGATGCCTTTG 213146 || | | || ||| ||||| ||||||||||| ||||| | || || | Sbjct 17389 CAGAGGTCTGAT-GGT--------TTCACATTCCACATGTCGAACTGGAGAATACCCT-- 17437 Query 213147 CTCACG--GGGCTGCCCTGGTAAGAGGAGTAGGGGCCATGCTCCTTGGCCAGCTCGCAGG 213204 | | | ||| ||||| | | | |||||||| || | |||||||| ||||| | | Sbjct 17438 CAGAGGTAGGGGAGCCCTTGAAGGTAGAGTAGGGACCCTCCTCCTTGGACAGCTGGACTG 17497 Query 213205 ACGCCTGCAGGGCAGCGTAGTAGATGGTTTCAAATATCTCCCTGTTGAGCTTCTTG-GCC 213263 | || |||||| |||| ||||| |||||||| |||| |||| || ||| | || Sbjct 17498 AGGCAGTCAGGGCGGCGTGATAGATAGTTTCAAAGATCTGTTTGTTCAG-TTCACGAGCT 17556 Query 213264 TCTGGGGACGTGAAGGGCATCATCATGCGTTGGAACACATCAGCCAGCCCCTGGACCCCG 213323 || |||||| ||| ||||| | | |||| |||| || || |||||||| || Sbjct 17557 TCGGGGGACTCGAAAGGCATGCGGAGGGCAAGGAATGCATCCGCAAGACCCTGGACACCA 17616 Query 213324 ATGCCGATGGGTCTGTGTCTCAGGTTAGACTTG-GAGCACTCCTCCAAGGGGTAAAAGTT 213382 | || ||||||| ||| | || ||| || |||| ||||| | || || ||| Sbjct 17617 ACACCAATGGGTCGGTGACGCATGTTGCTGTTACGAGC-CTCCTGAACAGGATAGTGGTT 17675 Query 213383 GCAGTCGATGATCTTGTTGAGGTTGCGGGTGGCCACTTTG-GTGACATGGGCCAGGTACT 213441 | ||| ||||||||||| |||||||| | | | | || ||||||| | ||| | | Sbjct 17676 GACGTCAATGATCTTGTTAAGGTTGCGAACGAC-AGTCTGAGTGACATCGTGCAGTTTTT 17734 Query 213442 CG---TGATTGAACACGTAGCCCCCGTCCTGCACAAACTCAGGCAGGGCGATGCTGGCCA 213498 | | || | | | | || ||| ||||| ||| ||||| | | || | Sbjct 17735 GGAAGTCATAGCAATCATTGCTGTAGTCA---ACAAAAGAAGGAAGGGCCAGGGAAGCGA 17791 Query 213499 GGTTGCAAACGGCCACCTCCTGAGAGTCTGTGTACTCCATGATCTCGGTGCACAGGTTGC 213558 ||||||| ||||| ||||| | || | |||| || |||||||| ||||| |||||| Sbjct 17792 GGTTGCAGACGGCGACCTCATCAGGAGCGCTGTATTCGATGATCTCAGTGCAAAGGTTGG 17851 Query 213559 TGCATCGGATGGTGCCCAGGTTCTGGTGGTTTGACT-TTGCG-TTGGCAGAATCCTTGTA 213616 | ||||| || || ||||||| ||||| ||| ||||| ||||| ||||||||| Sbjct 17852 AACTGCGGATAGTACCGAGGTTCTTCTGGTT--ACTCTTGCGGTTGGCGTGATCCTTGTA 17909 Query 213617 GAGCATGTAGGGGGACCCGGTCTCTAGCTGGGACACCAGTATCTGGCTCCAGAGGTACCT 213676 |||||| ||||| || || || ||| | | | || || | |||||| | Sbjct 17910 AAGCATGAAGGGGTTGCCAGTTTCGGTCTGAGCCTCGAGAATGGCGTACCAGAGCTTTTG 17969 Query 213677 GGCCTTGACCACCCGCCTGACAGCT---CCGGGCGTAGCCTCGTACTGTTCGTAGAGCTC 213733 |||||| || | || | || |||| | | |||||| |||||||| | Sbjct 17970 GGCCTT---CATGGTCTTGCGACCTTTGCCGGCCTT---CTCGTAGCTCTCGTAGAGAGC 18023 Query 213734 GTTGAATTCGTGGCCCCAG-ACCCTGTCCAGTCCCGGACAGGATGCGGGACACATGAGGC 213792 | || || | ||| || | | | | || || || || ||||||||| || Sbjct 18024 CTCAAACTCATCGCCATAGCAGTCAG-CAAGACCAGGGCACTCGTTGGGACACATTAGAG 18082 Query 213793 TCCAGTCCCCGT-CATCTCTGACTCTCTGCATGAACAGGTCCGGGACCCACAGCGCGGTG 213851 ||||||| |||| | |||| || | || |||||||| || |||| |||||| ||| | Sbjct 18083 TCCAGTCGCCGTTCTTCTCC-ACACGCTTCATGAACAAATCGGGGATCCACAGAGCGAGG 18141 Query 213852 AACAGGTCCCTGGTCCTCCTCTCGTCCACTCCAGAGTTTTTGCGCAGATCTAGAAAGTCA 213911 |||||||| | | | ||| ||| |||| ||| ||||| ||||| ||||| || Sbjct 18142 AACAGGTCACGAGCACGGACCTCCTCCTTTCCATGGTTCTTGCGAAGATCCAGAAATTCG 18201 Query 213912 AAGATGTCCGCGTGCCACGGCTCCATGTAGATGGCAAAGGCGCCCGGCCTCTTG---CCG 213968 || | ||| |||||||| ||||| | ||||||||| || || || || | |||| || Sbjct 18202 AATACGTCGGCGTGCCAAGGCTCGAGGTAGATGGCGAAAGCACCGGGTCGCTTGTTGCCA 18261 Query 213969 CCCTGGTCCACCAGCCTGGCCACCATGTTGAAGATGCGCAGGACGGGTACCAGCCCGTTG 214028 ||||| || || | || ||||||| | || || | |||| || |||||| Sbjct 18262 CCCTGATCAACATATCGAGCAGTGTTGTTGAATACACGGAGCATGGGTGTCACACCGTTG 18321 Query 214029 GACTGTCCGTTGGTTCCCGCTATATACGAGCCGGAGGCCCTCAG--GTTGCTCATGGAGA 214086 || |||||||| || || ||||| ||||| | ||| | | | || | | |||| Sbjct 18322 GAGGTACCGTTGGTACCGGCAATATAAGAGCCAGTGGCACGGATACGGTGAACGTTGAGA 18381 Query 214087 GCCCTATGCCACCGGCGTACTTGGAGATCATGGCGCAGCGCCTCACAGTCTCCATGATGC 214146 || |||||||| || |||||||||||||| ||| | | | || || || | Sbjct 18382 --CCGATGCCACCAGCCATTTTGGAGATCATGGCACAGGTCTTGAGGGTGTCATAAATAC 18439 Query 214147 CGGCCATGCTGTCATCTGTGAGGTTCAGCAAGAAGCAGCTCGAGAGCTGGGGCCTGGACG 214206 | | || ||||| || | | || | || |||||| || ||||||||| || | Sbjct 18440 CCTCAATACTGTCCTCCTTCATGTCGACCAGGAAGCATGAAGACAGCTGGGGC--TGAGG 18497 Query 214207 AG--CCAGAGTTGAAAAGCGTGGGGCTGGCATGGATCATAAACTTGTTAGAGAGGAGCCT 214264 || |||| |||||| || ||||| ||||| | | ||||| | || | ||| | Sbjct 18498 AGTACCAGCGTTGAAGAGTGTGGGAGAAGCATGTGTGAAGAACTTCATGGACATGAGGTT 18557 Query 214265 GTAGGTCTCCAGGAC 214279 ||||||||| ||||| Sbjct 18558 GTAGGTCTCGAGGAC 18572 >seq1157 Length=14967 Score = 89.7 bits (98), Expect = 1e-12 Identities = 339/521 (65%), Gaps = 21/521 (4%) Strand=Plus/Minus Query 47840 TGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTCC 47899 ||||| || || || | |||||||||||||| ||||| || | | ||||| |||||| Sbjct 11148 TGGTAATCACCTACACGCTTCTCAAAGAAGTTAGTCTTACCACCGAGGGAGATATTCTCC 11089 Query 47900 ATGAAGAGGAAGGGGTTGGGTGTGTTATACACCCGTGTCAGGCCCATCTGTTCCA-GCAG 47958 |||||| ||||||||||| | || || ||| | || ||| | || | || Sbjct 11088 ATGAAGTCGAAGGGGTTGGTAGACTTGTAGACCT-TCTCGTTACCAAGAGCGACAAGAAG 11030 Query 47959 GTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATGAGGGA 48018 | || || ||| |||||||||| | ||| || |||||| || | || | Sbjct 11029 ACGGTCGGCAACGAACTCGATGTACTGCTTCATAAGATCCGAGTTCATACCAAGCAGAG- 10971 Query 48019 CACG-GGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACAATCT 48077 ||| ||||| |||| || || || ||||| || || ||||| || | || | Sbjct 10970 CACAAGGCAATGCCTCGGTCAGGAATTCCTTTTCGATAGAGACGGCATCAGTAATGATGT 10911 Query 48078 GCTTAACGCGGGACTCTGAGGGTTTGTTGCGCA-GGTGCTTGGCAT---AG---AGCATG 48130 || || || ||| ||| || ||| || |||| || || || | | Sbjct 10910 CCTGAATT----AC-CTGC----TTGCTG-GCACGGCCCTTGAGATGAGAGTGAAGAAGG 10861 Query 48131 CAGGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGA 48190 || || ||||| |||| | || || || || ||||||| | || |||||| | | Sbjct 10860 CATGCGAAGTCAGTGTGAAGACCCTCATCACGAGAGATGAGCTCATTAGAGAAGGTTAAA 10801 Query 48191 CCAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAG 48250 |||||||| | || | || || | |||||| || | ||||| | || ||| || Sbjct 10800 CCAGGCATAAGACCTCGCTTCTTCAACCAGAAGATAGAAGCGAATGCACCGCTGAAAAAT 10741 Query 48251 ATGCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAG 48310 || ||||| || || ||||| || ||| | | | || | || | |||||| ||| Sbjct 10740 ATACCCTCGACAGCAGCGAATGCAACGAGACGTTGAGCAAAGGTGGCCTGCTTGTCCGAG 10681 Query 48311 ATCCAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGG 48351 ||||| || ||||| |||||||| ||||||||||| || Sbjct 10680 ATCCACCTGAGGGCCCACTCTGCCTTTTTCTTGATGCACGG 10640 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931517196825600