Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calonectria_20pseudonaviculata_20[genbank_20GCA_5F001696505.1_202016 -07-28] 1,340 sequences; 51,439,042 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq907 228 2e-54 seq1157 95.1 2e-14 >seq907 Length=75695 Score = 228 bits (252), Expect = 2e-54 Identities = 731/1117 (65%), Gaps = 43/1117 (4%) Strand=Plus/Plus Query 221417 GTCAGGGCAGCGTGGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTCTTG-GCCTCGGG 221475 |||||||| ||||| ||||| || ||||||||| ||||| ||| || | || ||||| Sbjct 17503 GTCAGGGCGGCGTGATAGATAGTTTCAAAGATCTGTTTGTTCAGT-TCACGAGCTTCGGG 17561 Query 221476 AGAAGTGAAGGGCATACGCAGCATCTGAAAGACGTCGGCCAGTCCCTGTACTCCGATACC 221535 || ||| ||||| || || | || | || || || ||||| || || | ||| Sbjct 17562 GGACTCGAAAGGCATGCGGAGGGCAAGGAATGCATCCGCAAGACCCTGGACACCAACACC 17621 Query 221536 GATGGGCCTGTGTCTCCTGTTG--GAAGCGGCCGCTTCTGGCACGGGATAAAAGTTGACG 221593 ||||| | ||| | | ||||| | || | || ||| || ||||| ||||||| Sbjct 17622 AATGGGTCGGTGACGCATGTTGCTGTTACGAGC-CTCCTGA-ACAGGATAGTGGTTGACG 17679 Query 221594 TCGATCAGATTGTTGAGGTTCAGAGTGATGACTTTAACCACCTCGGTCAGCTTCTGGTGA 221653 || || | ||||| ||||| || || | | || ||| ||| || ||| Sbjct 17680 TCAATGATCTTGTTAAGGTTGCGAACGACAGTCTGAGTGACATCGTGCAGTTTTTGGAAG 17739 Query 221654 TTGAACACCAACTCGCCGCCGTCGTGGAGGGGTTCCACAAAAGCGTTTAGGGCAACGCTG 221713 | | | ||| || || || || | ||||||| ||||| | | Sbjct 17740 TC--ATAGCAA-TCATTGCTGTAGT---------CAACAAAAGAAGGAAGGGCCAGGGAA 17787 Query 221714 GCCAGGTTACACACGGCCACCTCGTCCTTGTTGGTATACTGTATGATCTCTGTACAGAGG 221773 || ||||| || ||||| ||||| || | | || | |||||||| || || ||| Sbjct 17788 GCGAGGTTGCAGACGGCGACCTCATCAGGAGCGCTGTATTCGATGATCTCAGTGCAAAGG 17847 Query 221774 TTGCTGCACTT--GATGGTCCCCAGGTGATTGTGATTAGACTTGCGATTGGCAGCGTCCT 221831 ||| | ||| ||| || || |||| || || ||| |||||| ||||| |||| Sbjct 17848 TTG--GAACTGCGGATAGTACCGAGGTTCTTCTGGTTACTCTTGCGGTTGGCGTGATCCT 17905 Query 221832 TGTAGAGCATAAAGGGACCGCCAGTCTCCAGCTGAGCCACCAGAATCTTGTCCCAGAGTT 221891 |||| ||||| ||||| |||||| || ||||||| | ||||| || |||||| | Sbjct 17906 TGTAAAGCATGAAGGGGTTGCCAGTTTCGGTCTGAGCCTCGAGAATGGCGTACCAGAGCT 17965 Query 221892 CTCTGGCGCTCACCGTCCTCTTGAC---TGCACCCTCGGTCTTTTCATACCCG--GTATA 221946 | ||| ||| ||| | ||| ||| ||| ||| || || | ||| | Sbjct 17966 TTTGGGCCTTCATGGTCTTGC-GACCTTTGC-----CGGCCTTCTCGTAGCTCTCGTAGA 18019 Query 221947 GAGCATGTCAAACTTTTCACCGTACGCCTCGTCCAGGCCTGGACACCTGGCGGGACACAT 222006 |||| | |||||| || || || || | || || || ||| | ||||||||| Sbjct 18020 GAGCCT--CAAACTCATCGCCATAGCAGTCAGCAAGACCAGGGCACTCGTTGGGACACAT 18077 Query 222007 CAGACTCCAGTGCTTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATCCACAGCGC 222066 ||| |||||| ||| | | || | || |||||| | || ||||||||||| || Sbjct 18078 TAGAGTCCAGTCGCCGTTCTTCTCCACACGCTTCATGAACAAATCGGGGATCCACAGAGC 18137 Query 222067 CTGAAAGAGATCTCTGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGATCCAAAAA 222126 | || || || | | || ||||||| || | ||| || | ||||||| ||| Sbjct 18138 GAGGAACAGGTCACGAGCACGGACCTCCTCCTTTCCATGGTTCTTGCGAAGATCCAGAAA 18197 Query 222127 CTCAAAAATGTCAGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGTCGCTTGTT 222186 || || | ||| |||||||| ||||| || |||| ||| | ||| |||||||||||||| Sbjct 18198 TTCGAATACGTCGGCGTGCCAAGGCTCGAGGTAGATGGCGAAAGCACCGGGTCGCTTGTT 18257 Query 222187 GCCACCCTGATCCACCATCCTCTCCAGAG-CGTTGAAGATGCGAAGGGTCGGTACCAGTC 222245 ||||||||||| || ||| ||| | |||||| | || || | ||| || | Sbjct 18258 GCCACCCTGAT-CAACATATCGAGCAGTGTTGTTGAATACACGGAGCATGGGTGTCACAC 18316 Query 222246 CGTTGGATCGACCGTTGGTGCCCTTAATGTACGCACCGCCGGCCCTCAGGTTACTGGCAG 222305 ||||||| ||||||||| || ||| || | || ||| | || ||| | | Sbjct 18317 CGTTGGAGGTACCGTTGGTACCGGCAATATAAGAGCCAGTGGCAC---GGATACGGTGAA 18373 Query 222306 ACATG---CCGATACCACCGGCGTGTTTCGAGATCATGGCGCAGCTCTTGAGAGTGTCCA 222362 || ||||| ||||| || ||| ||||||||||| ||| ||||||| ||||| Sbjct 18374 CGTTGAGACCGATGCCACCAGCCATTTTGGAGATCATGGCACAGGTCTTGAGGGTGTCAT 18433 Query 222363 TGATGCCCTCCATAGAGTCCTCCTTGACGTTCAGCAGAAAACAAGACGACATCTGAGATT 222422 || ||||| ||| ||||||||| | || | ||| || || || |||| ||| | | Sbjct 18434 AAATACCCTCAATACTGTCCTCCTTCATGTCGACCAGGAAGCATGAAGACAGCTGGGGCT 18493 Query 222423 TGGTGGAACAGGCGTTAAACAGCGTGGGACTGGCGTGTGTAAAGTAGCCCCTAGACATCA 222482 | | || ||||| || || |||||| || ||||| ||| | | | ||||| | Sbjct 18494 GAGGAGTACCAGCGTTGAAGAGTGTGGGAGAAGCATGTGTGAAGAACTTCATGGACATGA 18553 Query 222483 GATCGTACGTCTCTACGACTCTGGCGATGTTGTCCCC 222519 | | ||| ||||| | ||| | | |||||||| || Sbjct 18554 GGTTGTAGGTCTCGAGGACACGCTCAATGTTGTCACC 18590 >seq1157 Length=14967 Score = 95.1 bits (104), Expect = 2e-14 Identities = 158/225 (70%), Gaps = 4/225 (2%) Strand=Plus/Plus Query 25814 GCATCAAGAGGAAGGCGCGGTGGGCCATGAAGTGGATCAACAGCCAGAGC--GCTACGTT 25871 ||||||||| ||||| ||||||| | | ||||||| | | || ||| || || || Sbjct 10644 GCATCAAGAAAAAGGCAGAGTGGGCCCTCAGGTGGATCT-CGGACA-AGCAGGCCACCTT 10701 Query 25872 TGGCGAGCGGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGC 25931 || | || || || || || |||||||| ||||| || |||||||||||| | || || Sbjct 10702 TGCTCAACGTCTCGTTGCATTCGCTGCTGTCGAGGGTATATTTTTCAGCGGTGCATTCGC 10761 Query 25932 GGCCATCTTCTGGCTCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCT 25991 | ||||||||| | ||| || || ||||| || | ||| || || ||||| Sbjct 10762 TTCTATCTTCTGGTTGAAGAAGCGAGGTCTTATGCCTGGTTTAACCTTCTCTAATGAGCT 10821 Query 25992 CATCAGCAGGGACGAGGGTCTCCACAGAGATTTTGCCTGCCTGCT 26036 |||| | || |||||||| |||| || || || ||||| || Sbjct 10822 CATCTCTCGTGATGAGGGTCTTCACACTGACTTCGCATGCCTTCT 10866 Score = 87.8 bits (96), Expect = 3e-12 Identities = 164/236 (69%), Gaps = 9/236 (4%) Strand=Plus/Plus Query 25477 ATATGGGAGATGTACAAGAAGGCTCAAAACT-CAAACTGGACCGCCGAAGAGATTGATCT 25535 || ||| |||||||||||||| | | | || | |||||||||||| || |||||||| Sbjct 10253 ATCTGGCAGATGTACAAGAAG-CACGAGGCTTCCTTCTGGACCGCCGAGGAAATTGATCT 10311 Query 25536 GGCCAAGGACATGGACGGCTGGTA----CGCTCTA-TCCAAAGACGAGCAGCATTTTCTC 25590 ||||||| || ||| |||| | |||| | | || || |||||| || || Sbjct 10312 TTCCAAGGATCTGCACGACTGGAATAACCGCTTGAATGCA--GATGAGCAGTTCTTCGTC 10369 Query 25591 AAGTACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAG 25650 || | | || ||||| || || ||||||||||| ||||| || || ||| |||| Sbjct 10370 TCTCACATTCTCGCTTTCTTCGCCGCATCTGATGGTATTGTGAATGAAAACCTGGTCGAG 10429 Query 25651 AGATTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGAT 25706 || |||| || || ||| | ||||| || ||||||||||||||||| Sbjct 10430 AGGTTCAGTGCCGAGGTCCAGATCCCTGAGGCTCGTTGCTTCTACGGTTTCCAGAT 10485 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928829241849600