Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Calonectria_20pseudonaviculata_20[genbank_20GCA_5F001696505.1_202016
-07-28] 1,340 sequences; 51,439,042 total letters
Query= NC_020104.1
Length=1021348
Score E
Sequences producing significant alignments: (Bits) Value
seq1144 105 4e-17
>seq1144
Length=167757
Score = 105 bits (116), Expect = 4e-17
Identities = 157/220 (71%), Gaps = 2/220 (1%)
Strand=Plus/Minus
Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610
||| |||||||| ||||| ||||| || || || || || ||||||| || ||
Sbjct 92114 ACGGAGACGGAGGACAAGGTGAAGGGTGGACTCCTTCTGAATGTTGTAATCAGAGAGGGT 92055
Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670
|| | ||| ||||| |||||||| || ||||| || || || || || |||||||||||
Sbjct 92054 TCGGCCATCCTCAAGCTGCTTTCCGGCGAAAATGAGTCGCTGCTGGTCCGGAGGAATTCC 91995
Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAG-TGTGTGAAGTTTCAA 480729
||||| || || ||||| || || |||||||| || | || | | ||||
Sbjct 91994 CTCCTTATCCTGGATCTTCGACTTAACGTTGTCAATAGTGTCGGATGACTCGA-CCTCAA 91936
Query 480730 GGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769
||||||| || || || || | |||||| || || |||||
Sbjct 91935 GGGTAATCGTCTTTCCAGTCAAAGTCTTCACAAAGATTTG 91896
Score = 102 bits (112), Expect = 5e-16
Identities = 156/220 (71%), Gaps = 2/220 (1%)
Strand=Plus/Minus
Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610
||| || ||||| || || || || || || || || || ||||||| || ||
Sbjct 91886 ACGGAGGCGGAGGACCAGGTGGAGGGTGGACTCCTTCTGAATGTTGTAATCAGAGAGTGT 91827
Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670
|| | ||| ||||| |||||||| || ||||| || || || || || |||||||||||
Sbjct 91826 TCGGCCATCCTCAAGCTGCTTTCCGGCGAAAATGAGTCGCTGCTGGTCCGGAGGAATTCC 91767
Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAG-TGTGTGAAGTTTCAA 480729
||||| || || ||||| || || |||||||| || | | | | || |
Sbjct 91766 CTCCTTATCCTGGATCTTCGACTTAACGTTGTCAATAGTGTCGGACGACTCCA-CCTCGA 91708
Query 480730 GGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769
|||||||||| || || ||||||||||| |||||||| ||
Sbjct 91707 GGGTAATAGTCTTGCCAGTGAGAGTCTTGACGAAAATCTG 91668
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 3268121720898320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |