Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calonectria_20pseudonaviculata_20[genbank_20GCA_5F001696505.1_202016 -07-28] 1,340 sequences; 51,439,042 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq389 111 2e-19 >seq389 Length=573914 Score = 111 bits (122), Expect = 2e-19 Identities = 177/254 (70%), Gaps = 0/254 (0%) Strand=Plus/Plus Query 139260 AGTCCATCTGCACCATGATATGCTGCATAGAATCCAGACATATTTGCGAGCAGTGCTTGT 139319 || |||| | ||| || || | || ||||| | ||| || || ||||| || || Sbjct 346666 AGGCCATGGGGACCGTGGTAAACGGCGTAGAAGGCGCTCATGTTGGCAAGCAGGGCCTGG 346725 Query 139320 GCTGTGCAGATGTTACTGGTTGCTTTGTCTCTTCTAATATGCTGCTCTCTAGTTTGTAGT 139379 || ||||||||||| ||||| || || |||| || ||| |||||||| | ||| || || Sbjct 346726 GCAGTGCAGATGTTGCTGGTGGCCTTCTCTCGTCGAATGTGCTGCTCACGAGTCTGCAGC 346785 Query 139380 GCTAATCTGTATGCAGGATTGCCTTCGCTGTCCACTGACTGACCTACAATTCTGCCAGGT 139439 || | | | || | ||||| | |||| || ||| ||||||| || || Sbjct 346786 GCAAGACGGAGAGCTCGCTTGCCGAGACGGTCCTTGGAAACACCGACAATTCGCCCGGGA 346845 Query 139440 ATCTTTCTCTTATACTTGTCTGTTGTTGCAAAGAATGCAGCATGAGGACCTCCGTATCCC 139499 ||||| | ||| ||||| || || || |||||||| ||||| ||||| || ||| | ||| Sbjct 346846 ATCTTGCGCTTGTACTTTTCAGTAGTGGCAAAGAAGGCAGCGTGAGGGCCACCGAAGCCC 346905 Query 139500 ATAGGAATACCAAA 139513 | |||| ||| || Sbjct 346906 AGGGGAACACCGAA 346919 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578988701776800