Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calonectria_20pseudonaviculata_20[genbank_20GCA_5F001696505.1_202016 -07-28] 1,340 sequences; 51,439,042 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq907 172 7e-38 seq1157 89.7 6e-13 >seq907 Length=75695 Score = 172 bits (190), Expect = 7e-38 Identities = 891/1398 (64%), Gaps = 39/1398 (3%) Strand=Plus/Minus Query 75212 CCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGTC 75271 || ||| ||||| | ||||| ||| | |||| ||| || || ||||||| |||| Sbjct 18629 CCGCAGCACATGATTATGCGTGTCTCTGTCGGTATCTGGGGTGACAACATTGAGCGTGTC 18570 Query 75272 TTGGAGACATACGACAAGATGTCCCA-AGGTATGTTCATTCACGCAACACCAACCCTCTT 75330 | ||||| ||| || |||||| | || | |||| || || | || || ||||| Sbjct 18569 CTCGAGACCTACAACCTCATGTCCATGAAGT-TCTTCACACATGCTTCTCCCACACTCTT 18511 Query 75331 CAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGA 75390 ||| |||||||| || || ||| |||| |||||||| ||| || |||||||| Sbjct 18510 CAACGCTGGTACTCCTCAGCCCCAGCTGTCTTCATGCTTCCTGGTCGACATGAAGGAGGA 18451 Query 75391 CTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGG 75450 | || | ||||| |||| || || | | ||||| ||||| || |||||| Sbjct 18450 CAGTATTGAGGGTATTTATGACACCCTCAAGACCTGTGCCATGATCTCCAAAATGGCTGG 18391 Query 75451 GGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAAA 75510 || || || | || | || | | | |||| | ||| |||| || || || Sbjct 18390 TGGCATCGGTCTCAACGTTCACCGTATCCGTGCCACTGGCTCTTATATTGCCGGTACCAA 18331 Query 75511 TGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGT 75570 ||| || | ||| | | || ||||| || ||||| ||| ||| || || ||||| Sbjct 18330 CGGTACCTCCAACGGTGTGACACCCATGCTCCGTGTATTCAACAACACTGCTCGATATGT 18271 Query 75571 AAATCAAGCGGGGCGTC--GCAAGG-GGTCCAT-CGCGGTCTACTTGGAACCATGGCATG 75626 |||| | | ||| | || | ||| | | ||| ||||| | || || ||||| | Sbjct 18270 TGATCAGG-GTGGCAACAAGCGACCCGGTGCTTTCGCCATCTACCTCGAGCCTTGGCACG 18212 Query 75627 CCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCTCGGTG-T 75685 |||| | | || || || || | || ||||| || | || |||| || ||| | Sbjct 18211 CCGACGTATTCGAATTTCTGGATCTTCGCAAGAACCATGGAAAGGAGGAGG-TCCGTGCT 18153 Query 75686 AGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGGAGGGT 75745 | || || || | |||||||| || || | ||||||||||| || ||| || Sbjct 18152 CGTGACCTGTTCCTCGCTCTGTGGATCCCCGATTTGTTCATGAAGCGTGTGGAGAAGAAC 18093 Query 75746 GGTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGAC-GCGGTGGGTGA 75804 || | ||| |||| | ||||| || || || ||||| | ||| || | || || Sbjct 18092 GGCGACTGGACTCTAATGTGTCCCAACGAGTGCCCTGGTCTTGCTGACTGCTAT-GGCGA 18034 Query 75805 GGAGTTTGAAGCCCTCTACACAAAGTATGAAGAGGAGGGTAGAG---CCAATGCGACTGT 75861 |||||||| || |||||| | || || ||| || | || ||| ||| | Sbjct 18033 TGAGTTTGAGGCTCTCTACGAGAGCTACGAGAAGGCCGGCAAAGGTCGCAA---GACCAT 17977 Query 75862 ACCAGCCGCCGATGTTTGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCATA 75921 ||| | | ||| | || |||||| | | ||||| || ||||| | || | Sbjct 17976 GAAGGCCCAAAAGCTCTGGTACGCCATTCTCGAGGCTCAGACCGAAACTGGCAACCCCTT 17917 Query 75922 TATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCAA 75981 ||||||||||||||| ||| ||||||||||| ||||| | || || ||| Sbjct 17916 CATGCTTTACAAGGATCACGCCAACCGCAAGAGTAACCAGAAGAACCTCGGTACTATCCG 17857 Query 75982 GAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTGTTTG 76041 || || || |||||||| || || | || |||| | | |||||| || || || Sbjct 17856 CAGTTCCAACCTTTGCACTGAGATCATCGAATACAGCGCTCCTGATGAGGTCGCCGTCTG 17797 Query 76042 CAATTTGGCATCAATCGCCCTTCCAAAGTATGTCAATGAAGAGACTCGCACT------TT 76095 ||| | || || | |||||||| | ||| ||| | | ||| | | Sbjct 17796 CAACCTCGCTTCCCTGGCCCTTCCTTCTTTTGT---TGACTACA---GCAATGATTGCTA 17743 Query 76096 TGATTATGAAAAACTTCATGAAATCACAAAGATTGTTACCAAAAATCTAAACCGAGTCAT 76155 ||| | ||||||| || || |||| ||| ||| || || ||| |||| Sbjct 17742 TGACTTCCAAAAACTGCACGATGTCACTCAGACTGTCGTTCGCAACCTTAACAAGATCAT 17683 Query 76156 TGACAGAAATTTTTATCCCGTTGAGACTGCGCGAAAGTCTAATATGCGACACAGACCTAT 76215 |||| || ||||| ||| || || || || || ||||| ||| |||| || Sbjct 17682 TGACGTCAACCACTATCCTGTTCAGGAGGCTCGTAACAGCAACATGCGTCACCGACCCAT 17623 Query 76216 TGGTTTGGGTGTTCAAGGTCTCGCGGATGTATTTATTTTGTGCCGCTACGCATTT-GATT 76274 |||| | ||||| || ||||| ||||||| ||| || |||| | || ||| || | Sbjct 17622 TGGTGTTGGTGTCCAGGGTCTTGCGGATGCATTCCTTGCCCTCCGC-ATGCCTTTCGAGT 17564 Query 76275 CAGATGAAGCCAAGGAGATGAATGCTCGTATCTTTGAAACCATGTATCACGCATCCCTGG 76334 | ||||| || |||| | ||||||||||| || |||||||| ||||| Sbjct 17563 CCCCCGAAGCTCGTGAACTGAACAAACAGATCTTTGAAACTATCTATCACGCCGCCCTGA 17504 Query 76335 AGGC--GAGTTGTGAATTGGCTGAAGCCCAAGGTTCCTATGAGACATTTGAGGGTTCTCC 76392 || ||| | || | | | | ||| |||| || || |||| || || Sbjct 17503 CTGCCTCAGT--CCAGCTGTCCAAGGAGGAGGGTCCCTACTCTACCTTCAAGGGCTCCCC 17446 Query 76393 CGCGTCCCAAGGGGTGCTTCAGTTTGATATGTGGGAAGGTGAAACCA--AGCTCAACTAC 76450 | || | || | || ||||| || |||| |||| ||||||||| || | || Sbjct 17445 TACCTCTGAGGGTATTCTCCAGTTCGACATGT-GGAATGTGAAACCATCAG-ACCTCTGG 17388 Query 76451 GACTGGGATGTTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGATG 76510 |||||||| ||| || | |||||||| | || | ||||||||||| | ||| Sbjct 17387 GACTGGGAATCCCTCCGTGAGCAGGTCAAGGAGCACGGCATCCGTAACAGTCTGCTCATG 17328 Query 76511 GCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCA 76570 || || ||||| || ||| ||| | || || |||||||| || ||||| || || || Sbjct 17327 GCGCCCATGCCTACTGCCAGTACCTCTCAGATTTTGGGTAACAACGAATGTTTCGAGCCT 17268 Query 76571 TACACAACAAACATCTAC 76588 |||||| | ||||| ||| Sbjct 17267 TACACATCCAACATATAC 17250 >seq1157 Length=14967 Score = 89.7 bits (98), Expect = 6e-13 Identities = 109/149 (73%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 65069 CCTTCGCCGAGCGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTCAT 65128 |||| || | || || |||| || || ||| |||||||| || ||| ||| ||| Sbjct 10698 CCTTTGCTCAACGTCTCGTTGCATTCGCTGCTGTCGAGGGTATATTTTTCAGCGGTGCAT 10757 Query 65129 TCTGCGCTATTTATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAATG 65188 || |||| | |||||||||||||| ||||| ||||| || || |||||| |||| Sbjct 10758 TCGCTTCTATCTTCTGGTTGAAGAAGCGAGGTCTTATGCCTGGTTTAACCTTCTCTAATG 10817 Query 65189 AACTTATTTCCCGAGATGAGGGTCTCCAC 65217 | || || || || ||||||||||| ||| Sbjct 10818 AGCTCATCTCTCGTGATGAGGGTCTTCAC 10846 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596559607459200