Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calonectria_20pseudonaviculata_20[genbank_20GCA_5F001696505.1_202016 -07-28] 1,340 sequences; 51,439,042 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq1272 145 2e-29 seq907 113 1e-19 seq1157 102 2e-16 seq514 93.3 1e-13 >seq1272 Length=124026 Score = 145 bits (160), Expect = 2e-29 Identities = 185/253 (73%), Gaps = 4/253 (2%) Strand=Plus/Plus Query 302593 CGACGCTGAATATAACCAGTTGTAGATGTTTTTACAGCTGTATCAATTAGACCAACACGA 302652 ||||||||||| ||||||||| | || || ||||| |||||||| ||||| | ||| Sbjct 88206 CGACGCTGAATGTAACCAGTTTCTGCAGTCTTGACAGCAGTATCAATCAGACCCTCGCGA 88265 Query 302653 CCACCCATAGCATGGAAGAATAGCTCTTCCGGTCGTAGCCCCCCAATAAAGGAGCTCTCA 302712 ||| |||| || |||||||| | |||| || || || | | | | ||| |||| Sbjct 88266 CCAGCCATGGCGTGGAAGAAGAACTCTGAAGGAGTAAGACCACGGAGATAAGAGTTCTCG 88325 Query 302713 ACGAAACCACGCGCCTCGGGCGAATCGTCGAACTTGGTAAAGTGTGGCAGGGTCCTGTTC 302772 ||||||||||| || ||||| || | || ||||||||| || ||||| || | || | Sbjct 88326 ACGAAACCACGAGCTTCGGGGGAGTAATCATCCTTGGTAAAATGGGGCAGCGTACGGTAC 88385 Query 302773 TCATAGCCGTATGGGATACGCTTTCCATCAACGTTCTGCTGTCCCAGGCACGA--AATCA 302830 | ||||| | || |||||||| || || || ||||||| || | || || | ||| Sbjct 88386 TTGAAGCCGAAGGGAATACGCTTACCCTCCACAATCTGCTGACC--GACAAGAGCAGTCA 88443 Query 302831 TCTGCGAAATATT 302843 ||||||||||||| Sbjct 88444 TCTGCGAAATATT 88456 >seq907 Length=75695 Score = 113 bits (124), Expect = 1e-19 Identities = 561/885 (63%), Gaps = 19/885 (2%) Strand=Plus/Plus Query 155626 CGCTGTATTCTACAATCTCACAGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCT 155685 |||||||||| | |||||| ||| ||||| ||||| ||| || || | ||||||| Sbjct 17819 CGCTGTATTCGATGATCTCAGTGCAAAGGTTGGAACTGCGGATAGTACCGAGGTTCTTCT 17878 Query 155686 GGTTAGATTTACTGTTACAAGCATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCT 155745 ||||| || | ||| ||||||||| || ||| | ||| | || || || ||| Sbjct 17879 GGTTACTCTTGCGGTTGGCGTGATCCTTGTAAAGCATGAAGGGGTTGCCAGTTTCGGTCT 17938 Query 155746 GTGCGTCCAGAATCTTTAGCCAGAGGTCACGGGCATTAATTTGCTTGTTGTATCTGCCTT 155805 | || || ||||| |||||| | |||| || || |||| | |||| Sbjct 17939 GAGCCTCGAGAATGGCGTACCAGAGCTTTTGGGCCTTCATGGTCTTGCGACCTTTGCCGG 17998 Query 155806 CCGACTCATA--TTTCATATACAGCGTTCGGTAATCCTCACCGTAACAATCACTCAGTCC 155863 || ||| || | || || | ||| | | || || || || || ||| || || Sbjct 17999 CCTTCTCGTAGCTCTCGTAGAGAGCCTCAA--ACTCATCGCCATAGCAGTCAGCAAGACC 18056 Query 155864 AGGGCACTTATCGGGGCAAAACAGCGACCAAATT---TTATTACCGATTACACGCTCCAT 155920 |||||||| | ||| || | || | ||| || || | | |||||| ||| Sbjct 18057 AGGGCACTCGTTGGGACACATTAGAGTCCAGTCGCCGTTCTTCTCCA---CACGCTTCAT 18113 Query 155921 AAATACATCACTCGCCCAAATAGCATAGAAAAGGTCCCTTGCCTTTGACTCCTCATCGCC 155980 || | ||| ||| | ||| ||| ||||| | || |||||| | || Sbjct 18114 GAACAAATCGGGGATCCACAGAGCGAGGAACAGGTCACGAGCACGGACCTCCTCCTTTCC 18173 Query 155981 GTGATTCTTCCGTAGCTCTAAGAATTCCTCAATA--TCAGGATGGTGTGGCTCCAGATAC 156038 || ||||| || || || | ||||| |||| || | || ||||| || || Sbjct 18174 ATGGTTCTTGCGAAGATCCAGAAATTCG--AATACGTCGGCGTGCCAAGGCTCGAGGTAG 18231 Query 156039 ATAGCAAAACTACCATTCCTCTTG---CCACCCTGATCTACATACCGAGCAGTCTTATTG 156095 || || ||| ||| | |||| ||||||||||| ||||| |||||||| || ||| Sbjct 18232 ATGGCGAAAGCACCGGGTCGCTTGTTGCCACCCTGATCAACATATCGAGCAGTGTTGTTG 18291 Query 156096 AAGACACCTAGCATAGGAATAATACCATTGGAAGTGCCATTGGTTCCGCGAATATGCGAA 156155 || |||| ||||| || | | ||| ||||| || || ||||| ||| ||||| || Sbjct 18292 AATACACGGAGCATGGGTGTCACACCGTTGGAGGTACCGTTGGTACCGGCAATATAAGAG 18351 Query 156156 CCAGATGAGCGAACATTATGAATATGTAGTCCAATACCACCTGACCATTTAGAAATTTGA 156215 |||| | || | | |||| | || || || ||||| | | ||| || || Sbjct 18352 CCAGTGGCACGGATACGGTGAACGTTGAGACCGATGCCACCAGCCATTTTGGAGATCATG 18411 Query 156216 GCGCATTCCTTTACAGTATTGAAAATACCTTCAATAGAATCATCTTCCATTGATAGTAGA 156275 || || ||| | || | ||||||| |||||| || || | ||| | || Sbjct 18412 GCACAGGTCTTGAGGGTGTCATAAATACCCTCAATACTGTCCTCCTTCATGTCGACCAGG 18471 Query 156276 TAGCACGAACTTAATTGAGGTCGTGGTGTTCCAGCGTTGAATAGTGTAGGTGTTGCATGA 156335 |||| ||| | || || | || || ||||||||||| ||||| || | ||||| Sbjct 18472 AAGCATGAAGACAGCTGGGGCTGAGGAGTACCAGCGTTGAAGAGTGTGGGAGAAGCATGT 18531 Query 156336 ATAAAATACTTATTAGACATATAATCGTATGTCTCCTTAATCTTCTCAA-GATTAGACCC 156394 | || |||| | ||||| | ||| ||||| | ||||| | | |||| Sbjct 18532 GTGAAGAACTTCATGGACATGAGGTTGTAGGTCTCGAGGACACGCTCAATGTTGTCACCC 18591 Query 156395 GTGAATACAGATAGAGACCCTCATCCACATATGCTGAGGACGCTCTACAATCACTCCATC 156454 | |||| || |||||| | ||| ||| ||||| || ||||| |||||| ||||| Sbjct 18592 CAG-ATACCGACAGAGACACGCATAATCATGTGCTGCGGTCGCTCAACAATCTTACCATC 18650 Query 156455 AATTCGCAGAAGGTATGCGCGTTCCAGAGTTTTAAACCCGAAATA 156499 ||| || ||||| | || || || || || || || || || Sbjct 18651 AATCTTGAGGAGGTAAGATCGCTCGAGGGTCTTGAAGCCAAAGTA 18695 >seq1157 Length=14967 Score = 102 bits (112), Expect = 2e-16 Identities = 163/234 (70%), Gaps = 0/234 (0%) Strand=Plus/Plus Query 133439 CCTTGTATTAAAAAGAAATCTGACTGGGCTATTAAATGGATCCAGGACAAGCGTGCGAGT 133498 || || || || || || | || ||||| | | |||||| |||||||| || | Sbjct 10640 CCGTGCATCAAGAAAAAGGCAGAGTGGGCCCTCAGGTGGATCTCGGACAAGCAGGCCACC 10699 Query 133499 TTTGCTACTCGTCTCGTTGCTTTTGCTGTAGTAGAGGGCAtttttttCAGTGGTGCGTTC 133558 |||||| ||||||||||| || |||| || ||||| || |||||||| ||||| ||| Sbjct 10700 TTTGCTCAACGTCTCGTTGCATTCGCTGCTGTCGAGGGTATATTTTTCAGCGGTGCATTC 10759 Query 133559 TGCTCTATTTTTTGGCTTAAAAAGCGTGGTATTCTACCTGGACTGTGTTTTTCTAACGAA 133618 ||||| || ||| | || ||||| ||| || | ||||| | || ||||| || Sbjct 10760 GCTTCTATCTTCTGGTTGAAGAAGCGAGGTCTTATGCCTGGTTTAACCTTCTCTAATGAG 10819 Query 133619 CTTATTTCAAGGGACGAGGCACTTCACACCGAATTTGCCGTTTTACTTCACTCT 133672 || || || | || |||| |||||||| || || || | ||||||||| Sbjct 10820 CTCATCTCTCGTGATGAGGGTCTTCACACTGACTTCGCATGCCTTCTTCACTCT 10873 >seq514 Length=22135 Score = 93.3 bits (102), Expect = 1e-13 Identities = 119/164 (73%), Gaps = 0/164 (0%) Strand=Plus/Plus Query 251407 ATAAGACCACACTTATTACACACATGGACGCTGTAAGCATCAGATGCGTCATATAGCCGA 251466 || || ||||| | | || || || || | | |||||||||| | ||| |||| || Sbjct 16922 ATGAGCCCACAAATTTCGCAGACGTGAACTCGGAAAGCATCAGAAACTTCAAATAGACGC 16981 Query 251467 CCCTTGGTGAAGCGAGATGCACCGTGTGAAATCATACAATCACGCTCCATTTCACCGAAA 251526 | || ||| | || ||||| | |||||||||||| || |||||||| ||||| Sbjct 16982 TCTTTCAAGAATGCCGCAGCTCCGTGGGCAATCATACAATCTCGTTCCATTTCTCCGAAT 17041 Query 251527 CGAAGACCACCATCGCGAGCCCTACCCTCGGCAGGCTGACGAGT 251570 |||||||||||||| ||||| | ||| ||| |||| || || || Sbjct 17042 CGAAGACCACCATCTCGAGCACGACCTTCGACAGGTTGTCGCGT 17085 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471792330731580