Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Calonectria_20pseudonaviculata_20[genbank_20GCA_5F001696505.1_202016
-07-28] 1,340 sequences; 51,439,042 total letters
Query= NC_021312.1
Length=459984
Score E
Sequences producing significant alignments: (Bits) Value
seq1272 145 2e-29
seq907 113 1e-19
seq1157 102 2e-16
seq514 93.3 1e-13
>seq1272
Length=124026
Score = 145 bits (160), Expect = 2e-29
Identities = 185/253 (73%), Gaps = 4/253 (2%)
Strand=Plus/Plus
Query 302593 CGACGCTGAATATAACCAGTTGTAGATGTTTTTACAGCTGTATCAATTAGACCAACACGA 302652
||||||||||| ||||||||| | || || ||||| |||||||| ||||| | |||
Sbjct 88206 CGACGCTGAATGTAACCAGTTTCTGCAGTCTTGACAGCAGTATCAATCAGACCCTCGCGA 88265
Query 302653 CCACCCATAGCATGGAAGAATAGCTCTTCCGGTCGTAGCCCCCCAATAAAGGAGCTCTCA 302712
||| |||| || |||||||| | |||| || || || | | | | ||| ||||
Sbjct 88266 CCAGCCATGGCGTGGAAGAAGAACTCTGAAGGAGTAAGACCACGGAGATAAGAGTTCTCG 88325
Query 302713 ACGAAACCACGCGCCTCGGGCGAATCGTCGAACTTGGTAAAGTGTGGCAGGGTCCTGTTC 302772
||||||||||| || ||||| || | || ||||||||| || ||||| || | || |
Sbjct 88326 ACGAAACCACGAGCTTCGGGGGAGTAATCATCCTTGGTAAAATGGGGCAGCGTACGGTAC 88385
Query 302773 TCATAGCCGTATGGGATACGCTTTCCATCAACGTTCTGCTGTCCCAGGCACGA--AATCA 302830
| ||||| | || |||||||| || || || ||||||| || | || || | |||
Sbjct 88386 TTGAAGCCGAAGGGAATACGCTTACCCTCCACAATCTGCTGACC--GACAAGAGCAGTCA 88443
Query 302831 TCTGCGAAATATT 302843
|||||||||||||
Sbjct 88444 TCTGCGAAATATT 88456
>seq907
Length=75695
Score = 113 bits (124), Expect = 1e-19
Identities = 561/885 (63%), Gaps = 19/885 (2%)
Strand=Plus/Plus
Query 155626 CGCTGTATTCTACAATCTCACAGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCT 155685
|||||||||| | |||||| ||| ||||| ||||| ||| || || | |||||||
Sbjct 17819 CGCTGTATTCGATGATCTCAGTGCAAAGGTTGGAACTGCGGATAGTACCGAGGTTCTTCT 17878
Query 155686 GGTTAGATTTACTGTTACAAGCATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCT 155745
||||| || | ||| ||||||||| || ||| | ||| | || || || |||
Sbjct 17879 GGTTACTCTTGCGGTTGGCGTGATCCTTGTAAAGCATGAAGGGGTTGCCAGTTTCGGTCT 17938
Query 155746 GTGCGTCCAGAATCTTTAGCCAGAGGTCACGGGCATTAATTTGCTTGTTGTATCTGCCTT 155805
| || || ||||| |||||| | |||| || || |||| | ||||
Sbjct 17939 GAGCCTCGAGAATGGCGTACCAGAGCTTTTGGGCCTTCATGGTCTTGCGACCTTTGCCGG 17998
Query 155806 CCGACTCATA--TTTCATATACAGCGTTCGGTAATCCTCACCGTAACAATCACTCAGTCC 155863
|| ||| || | || || | ||| | | || || || || || ||| || ||
Sbjct 17999 CCTTCTCGTAGCTCTCGTAGAGAGCCTCAA--ACTCATCGCCATAGCAGTCAGCAAGACC 18056
Query 155864 AGGGCACTTATCGGGGCAAAACAGCGACCAAATT---TTATTACCGATTACACGCTCCAT 155920
|||||||| | ||| || | || | ||| || || | | |||||| |||
Sbjct 18057 AGGGCACTCGTTGGGACACATTAGAGTCCAGTCGCCGTTCTTCTCCA---CACGCTTCAT 18113
Query 155921 AAATACATCACTCGCCCAAATAGCATAGAAAAGGTCCCTTGCCTTTGACTCCTCATCGCC 155980
|| | ||| ||| | ||| ||| ||||| | || |||||| | ||
Sbjct 18114 GAACAAATCGGGGATCCACAGAGCGAGGAACAGGTCACGAGCACGGACCTCCTCCTTTCC 18173
Query 155981 GTGATTCTTCCGTAGCTCTAAGAATTCCTCAATA--TCAGGATGGTGTGGCTCCAGATAC 156038
|| ||||| || || || | ||||| |||| || | || ||||| || ||
Sbjct 18174 ATGGTTCTTGCGAAGATCCAGAAATTCG--AATACGTCGGCGTGCCAAGGCTCGAGGTAG 18231
Query 156039 ATAGCAAAACTACCATTCCTCTTG---CCACCCTGATCTACATACCGAGCAGTCTTATTG 156095
|| || ||| ||| | |||| ||||||||||| ||||| |||||||| || |||
Sbjct 18232 ATGGCGAAAGCACCGGGTCGCTTGTTGCCACCCTGATCAACATATCGAGCAGTGTTGTTG 18291
Query 156096 AAGACACCTAGCATAGGAATAATACCATTGGAAGTGCCATTGGTTCCGCGAATATGCGAA 156155
|| |||| ||||| || | | ||| ||||| || || ||||| ||| ||||| ||
Sbjct 18292 AATACACGGAGCATGGGTGTCACACCGTTGGAGGTACCGTTGGTACCGGCAATATAAGAG 18351
Query 156156 CCAGATGAGCGAACATTATGAATATGTAGTCCAATACCACCTGACCATTTAGAAATTTGA 156215
|||| | || | | |||| | || || || ||||| | | ||| || ||
Sbjct 18352 CCAGTGGCACGGATACGGTGAACGTTGAGACCGATGCCACCAGCCATTTTGGAGATCATG 18411
Query 156216 GCGCATTCCTTTACAGTATTGAAAATACCTTCAATAGAATCATCTTCCATTGATAGTAGA 156275
|| || ||| | || | ||||||| |||||| || || | ||| | ||
Sbjct 18412 GCACAGGTCTTGAGGGTGTCATAAATACCCTCAATACTGTCCTCCTTCATGTCGACCAGG 18471
Query 156276 TAGCACGAACTTAATTGAGGTCGTGGTGTTCCAGCGTTGAATAGTGTAGGTGTTGCATGA 156335
|||| ||| | || || | || || ||||||||||| ||||| || | |||||
Sbjct 18472 AAGCATGAAGACAGCTGGGGCTGAGGAGTACCAGCGTTGAAGAGTGTGGGAGAAGCATGT 18531
Query 156336 ATAAAATACTTATTAGACATATAATCGTATGTCTCCTTAATCTTCTCAA-GATTAGACCC 156394
| || |||| | ||||| | ||| ||||| | ||||| | | ||||
Sbjct 18532 GTGAAGAACTTCATGGACATGAGGTTGTAGGTCTCGAGGACACGCTCAATGTTGTCACCC 18591
Query 156395 GTGAATACAGATAGAGACCCTCATCCACATATGCTGAGGACGCTCTACAATCACTCCATC 156454
| |||| || |||||| | ||| ||| ||||| || ||||| |||||| |||||
Sbjct 18592 CAG-ATACCGACAGAGACACGCATAATCATGTGCTGCGGTCGCTCAACAATCTTACCATC 18650
Query 156455 AATTCGCAGAAGGTATGCGCGTTCCAGAGTTTTAAACCCGAAATA 156499
||| || ||||| | || || || || || || || || ||
Sbjct 18651 AATCTTGAGGAGGTAAGATCGCTCGAGGGTCTTGAAGCCAAAGTA 18695
>seq1157
Length=14967
Score = 102 bits (112), Expect = 2e-16
Identities = 163/234 (70%), Gaps = 0/234 (0%)
Strand=Plus/Plus
Query 133439 CCTTGTATTAAAAAGAAATCTGACTGGGCTATTAAATGGATCCAGGACAAGCGTGCGAGT 133498
|| || || || || || | || ||||| | | |||||| |||||||| || |
Sbjct 10640 CCGTGCATCAAGAAAAAGGCAGAGTGGGCCCTCAGGTGGATCTCGGACAAGCAGGCCACC 10699
Query 133499 TTTGCTACTCGTCTCGTTGCTTTTGCTGTAGTAGAGGGCAtttttttCAGTGGTGCGTTC 133558
|||||| ||||||||||| || |||| || ||||| || |||||||| ||||| |||
Sbjct 10700 TTTGCTCAACGTCTCGTTGCATTCGCTGCTGTCGAGGGTATATTTTTCAGCGGTGCATTC 10759
Query 133559 TGCTCTATTTTTTGGCTTAAAAAGCGTGGTATTCTACCTGGACTGTGTTTTTCTAACGAA 133618
||||| || ||| | || ||||| ||| || | ||||| | || ||||| ||
Sbjct 10760 GCTTCTATCTTCTGGTTGAAGAAGCGAGGTCTTATGCCTGGTTTAACCTTCTCTAATGAG 10819
Query 133619 CTTATTTCAAGGGACGAGGCACTTCACACCGAATTTGCCGTTTTACTTCACTCT 133672
|| || || | || |||| |||||||| || || || | |||||||||
Sbjct 10820 CTCATCTCTCGTGATGAGGGTCTTCACACTGACTTCGCATGCCTTCTTCACTCT 10873
>seq514
Length=22135
Score = 93.3 bits (102), Expect = 1e-13
Identities = 119/164 (73%), Gaps = 0/164 (0%)
Strand=Plus/Plus
Query 251407 ATAAGACCACACTTATTACACACATGGACGCTGTAAGCATCAGATGCGTCATATAGCCGA 251466
|| || ||||| | | || || || || | | |||||||||| | ||| |||| ||
Sbjct 16922 ATGAGCCCACAAATTTCGCAGACGTGAACTCGGAAAGCATCAGAAACTTCAAATAGACGC 16981
Query 251467 CCCTTGGTGAAGCGAGATGCACCGTGTGAAATCATACAATCACGCTCCATTTCACCGAAA 251526
| || ||| | || ||||| | |||||||||||| || |||||||| |||||
Sbjct 16982 TCTTTCAAGAATGCCGCAGCTCCGTGGGCAATCATACAATCTCGTTCCATTTCTCCGAAT 17041
Query 251527 CGAAGACCACCATCGCGAGCCCTACCCTCGGCAGGCTGACGAGT 251570
|||||||||||||| ||||| | ||| ||| |||| || || ||
Sbjct 17042 CGAAGACCACCATCTCGAGCACGACCTTCGACAGGTTGTCGCGT 17085
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1471792330731580
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |