Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Calonectria_20pseudonaviculata_20[genbank_20GCA_5F001696505.1_202016
-07-28] 1,340 sequences; 51,439,042 total letters
Query= NC_022098.1
Length=2473870
Score E
Sequences producing significant alignments: (Bits) Value
seq1280 122 1e-21
seq520 111 2e-18
seq586 105 1e-16
seq907 95.1 2e-13
>seq1280
Length=530099
Score = 122 bits (134), Expect = 1e-21
Identities = 90/105 (86%), Gaps = 0/105 (0%)
Strand=Plus/Plus
Query 2035651 CCAACTACCTCGACATCAAGCCCCTCCTCGATTTGGGGTGCAAGACCGTGGCCAACCTTA 2035710
|||||||| | |||||||||||||| |||||| | || ||||||||||| |||||| | |
Sbjct 30933 CCAACTACTTGGACATCAAGCCCCTTCTCGATGTCGGCTGCAAGACCGTCGCCAACATGA 30992
Query 2035711 TCAAGGGCAAGTCGCCCGAGGACATCCGCAAGACCTTTAACATCA 2035755
||||||||||||| |||||||| || ||||| || || |||||||
Sbjct 30993 TCAAGGGCAAGTCCCCCGAGGAGATTCGCAAAACATTCAACATCA 31037
>seq520
Length=35863
Score = 111 bits (122), Expect = 2e-18
Identities = 172/246 (70%), Gaps = 0/246 (0%)
Strand=Plus/Plus
Query 2019194 CCTGCCGCCCGGCCGCCACAAGGTGATCATCCTCGATGAGGCCGACTGCCTTACGTCGGC 2019253
||| || ||||||| |||||| | ||||||||||| || ||||| || | || || |
Sbjct 20591 CCTCCCTGCCGGCCGACACAAGCTTATCATCCTCGACGAAGCCGATAGCATGACCTCCGG 20650
Query 2019254 GGCCCAGCAGGCCCTCCGATCGACCATGGAAAAGTACACCAACACGACGCGGTTTGCGCT 2019313
|||||||| || |||||| || ||||||| ||| |||||||||| || ||||| |
Sbjct 20651 AGCCCAGCAAGCTCTCCGACGAACAATGGAAATTTACTCCAACACGACCCGATTTGCATT 20710
Query 2019314 GGCCTGCAACACGTCGTCGATGGTCATCGAAGCCCTCCAGAGCCGTTGCGCCATCTTGCG 2019373
|| || ||| |||| | ||||||| | | ||| | |||||||| | ||
Sbjct 20711 TGCTTGTAACCAGTCGAATAAAATCATCGAGCCTTTGCAGTCGAGATGCGCCATTCTTCG 20770
Query 2019374 CTTTGCGCGCCTCACCGACGCCCAGATCGCCGCGCGTCTGCGCGAGATTATCGACGCCGA 2019433
|| ||| |||||||| |||||| | | | || | | |||||||| |||||
Sbjct 20771 CTATGCCAAACTCACCGATGCCCAGGTGGTCAAACGATTAATGCAAATTATCGAGGCCGA 20830
Query 2019434 AAAGGT 2019439
||||||
Sbjct 20831 AAAGGT 20836
>seq586
Length=14181
Score = 105 bits (116), Expect = 1e-16
Identities = 85/103 (83%), Gaps = 0/103 (0%)
Strand=Plus/Minus
Query 1485471 GTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCAT 1485530
|||||||||||| |||||||||||||| || ||||| ||| |||| ||||| ||| | |
Sbjct 5322 GTACTTGGTGACAGCCTTGGTACCCTCAGATACGGCATGCTTGGCGAGTTCACCGGGGAG 5263
Query 1485531 GATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTG 1485573
||| ||||| || | ||||||||||||||||| | ||| |||
Sbjct 5262 GATGAGGCGGACAGAGGTCTGGATCTCGCGGGAGGAGATGGTG 5220
>seq907
Length=75695
Score = 95.1 bits (104), Expect = 2e-13
Identities = 325/504 (64%), Gaps = 21/504 (4%)
Strand=Plus/Plus
Query 2073540 CTGGTCGACATAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGG---CACAAGGCCGTT 2073596
||| || ||||| || || |||| ||| || || ||||||||||| |||| |||||
Sbjct 18264 CTGATCAACATATCGAGCAGTGTTGTTGAATACACGGAGCATGGGTGTCACA---CCGTT 18320
Query 2073597 GGACTCGCCGTTGGTGCCCGCCACGTAGGCGCCCGAGGCGCGCACCTTGTGCGCGGCAAA 2073656
||| |||||||| || || | || | ||| | ||| || | ||| || |
Sbjct 18321 GGAGGTACCGTTGGTACCGGCAATATAAGAGCCAGTGGCACGGATACGGTGAACGTTGAG 18380
Query 2073657 GCCGATGCCGCCGGCCGCCTTGGAGATGAGCGCGCACTTTTTCAGCGTCTCGTAGATGCC 2073716
|||||||| || ||| |||||||| | || || | || || || || || || ||
Sbjct 18381 ACCGATGCCACCAGCCATTTTGGAGATCATGGCACAGGTCTTGAGGGTGTCATAAATACC 18440
Query 2073717 CTCGATCGAGTCGGCCTTCATGTCCAACAGAAAGCACGACGAGTTTTGCGGGCGCGCCGT 2073776
||| || ||| |||||||||| | ||| ||||| || || || || | | ||
Sbjct 18441 CTCAATACTGTCCTCCTTCATGTCGACCAGGAAGCATGAAGACAGCTGGGGCTGAGGAGT 18500
Query 2073777 GCCGGCATTGAAGAGCGTGGGCGTCGCCGCCGTGTACGACTGTTGGGACATGGCCTCGTA 2073836
|| || |||||||| ||||| | || ||| | ||| ||||||| | |||
Sbjct 18501 ACCAGCGTTGAAGAGTGTGGGAGAAGCATGTGTGAAGAACTTCATGGACATGAGGTTGTA 18560
Query 2073837 GGTGGCGAGCACGCGCGCCAGCGCGTCTTGGACGTCGGCAAACCCATAGTGGCCGATGGC 2073896
||| |||| || ||| | | | || ||| |||| || |||| |
Sbjct 18561 GGTCTCGAGGACACGCTCAA-----TGTT----GTC-----ACCC-CAGATACCGACAGA 18605
Query 2073897 GACGCGCATGATCATGTACTGGGGTCGCTCGACGACGGCGTCGCGCACCTTGGTCAGGTA 2073956
||| ||||| ||||||| ||| |||||||| || | | | |||| |||||
Sbjct 18606 GACACGCATAATCATGTGCTGCGGTCGCTCAACAATCTTACCATCAATCTTGAGGAGGTA 18665
Query 2073957 GGACCGACGCAGGGTCGCCAGGCCAAAGTACGAGTAGGCCAGGTCGCGCTCGTGGCGGAT 2074016
|| || |||||| | ||||||||| |||| | ||||| |||| ||
Sbjct 18666 AGATCGCTCGAGGGTCTTGAAGCCAAAGTATTGGTAGTTGAAATCGCGATCGTACACAAT 18725
Query 2074017 GGCGGCGTCGAGGGCCTCCTTGTG 2074040
||| | |||||| ||||||||||
Sbjct 18726 GGCAGAGTCGAGCTCCTCCTTGTG 18749
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7916103858088260
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |