Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calonectria_20pseudonaviculata_20[genbank_20GCA_5F001696505.1_202016 -07-28] 1,340 sequences; 51,439,042 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq1280 122 1e-21 seq520 111 2e-18 seq586 105 1e-16 seq907 95.1 2e-13 >seq1280 Length=530099 Score = 122 bits (134), Expect = 1e-21 Identities = 90/105 (86%), Gaps = 0/105 (0%) Strand=Plus/Plus Query 2035651 CCAACTACCTCGACATCAAGCCCCTCCTCGATTTGGGGTGCAAGACCGTGGCCAACCTTA 2035710 |||||||| | |||||||||||||| |||||| | || ||||||||||| |||||| | | Sbjct 30933 CCAACTACTTGGACATCAAGCCCCTTCTCGATGTCGGCTGCAAGACCGTCGCCAACATGA 30992 Query 2035711 TCAAGGGCAAGTCGCCCGAGGACATCCGCAAGACCTTTAACATCA 2035755 ||||||||||||| |||||||| || ||||| || || ||||||| Sbjct 30993 TCAAGGGCAAGTCCCCCGAGGAGATTCGCAAAACATTCAACATCA 31037 >seq520 Length=35863 Score = 111 bits (122), Expect = 2e-18 Identities = 172/246 (70%), Gaps = 0/246 (0%) Strand=Plus/Plus Query 2019194 CCTGCCGCCCGGCCGCCACAAGGTGATCATCCTCGATGAGGCCGACTGCCTTACGTCGGC 2019253 ||| || ||||||| |||||| | ||||||||||| || ||||| || | || || | Sbjct 20591 CCTCCCTGCCGGCCGACACAAGCTTATCATCCTCGACGAAGCCGATAGCATGACCTCCGG 20650 Query 2019254 GGCCCAGCAGGCCCTCCGATCGACCATGGAAAAGTACACCAACACGACGCGGTTTGCGCT 2019313 |||||||| || |||||| || ||||||| ||| |||||||||| || ||||| | Sbjct 20651 AGCCCAGCAAGCTCTCCGACGAACAATGGAAATTTACTCCAACACGACCCGATTTGCATT 20710 Query 2019314 GGCCTGCAACACGTCGTCGATGGTCATCGAAGCCCTCCAGAGCCGTTGCGCCATCTTGCG 2019373 || || ||| |||| | ||||||| | | ||| | |||||||| | || Sbjct 20711 TGCTTGTAACCAGTCGAATAAAATCATCGAGCCTTTGCAGTCGAGATGCGCCATTCTTCG 20770 Query 2019374 CTTTGCGCGCCTCACCGACGCCCAGATCGCCGCGCGTCTGCGCGAGATTATCGACGCCGA 2019433 || ||| |||||||| |||||| | | | || | | |||||||| ||||| Sbjct 20771 CTATGCCAAACTCACCGATGCCCAGGTGGTCAAACGATTAATGCAAATTATCGAGGCCGA 20830 Query 2019434 AAAGGT 2019439 |||||| Sbjct 20831 AAAGGT 20836 >seq586 Length=14181 Score = 105 bits (116), Expect = 1e-16 Identities = 85/103 (83%), Gaps = 0/103 (0%) Strand=Plus/Minus Query 1485471 GTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCAT 1485530 |||||||||||| |||||||||||||| || ||||| ||| |||| ||||| ||| | | Sbjct 5322 GTACTTGGTGACAGCCTTGGTACCCTCAGATACGGCATGCTTGGCGAGTTCACCGGGGAG 5263 Query 1485531 GATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTG 1485573 ||| ||||| || | ||||||||||||||||| | ||| ||| Sbjct 5262 GATGAGGCGGACAGAGGTCTGGATCTCGCGGGAGGAGATGGTG 5220 >seq907 Length=75695 Score = 95.1 bits (104), Expect = 2e-13 Identities = 325/504 (64%), Gaps = 21/504 (4%) Strand=Plus/Plus Query 2073540 CTGGTCGACATAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGG---CACAAGGCCGTT 2073596 ||| || ||||| || || |||| ||| || || ||||||||||| |||| ||||| Sbjct 18264 CTGATCAACATATCGAGCAGTGTTGTTGAATACACGGAGCATGGGTGTCACA---CCGTT 18320 Query 2073597 GGACTCGCCGTTGGTGCCCGCCACGTAGGCGCCCGAGGCGCGCACCTTGTGCGCGGCAAA 2073656 ||| |||||||| || || | || | ||| | ||| || | ||| || | Sbjct 18321 GGAGGTACCGTTGGTACCGGCAATATAAGAGCCAGTGGCACGGATACGGTGAACGTTGAG 18380 Query 2073657 GCCGATGCCGCCGGCCGCCTTGGAGATGAGCGCGCACTTTTTCAGCGTCTCGTAGATGCC 2073716 |||||||| || ||| |||||||| | || || | || || || || || || || Sbjct 18381 ACCGATGCCACCAGCCATTTTGGAGATCATGGCACAGGTCTTGAGGGTGTCATAAATACC 18440 Query 2073717 CTCGATCGAGTCGGCCTTCATGTCCAACAGAAAGCACGACGAGTTTTGCGGGCGCGCCGT 2073776 ||| || ||| |||||||||| | ||| ||||| || || || || | | || Sbjct 18441 CTCAATACTGTCCTCCTTCATGTCGACCAGGAAGCATGAAGACAGCTGGGGCTGAGGAGT 18500 Query 2073777 GCCGGCATTGAAGAGCGTGGGCGTCGCCGCCGTGTACGACTGTTGGGACATGGCCTCGTA 2073836 || || |||||||| ||||| | || ||| | ||| ||||||| | ||| Sbjct 18501 ACCAGCGTTGAAGAGTGTGGGAGAAGCATGTGTGAAGAACTTCATGGACATGAGGTTGTA 18560 Query 2073837 GGTGGCGAGCACGCGCGCCAGCGCGTCTTGGACGTCGGCAAACCCATAGTGGCCGATGGC 2073896 ||| |||| || ||| | | | || ||| |||| || |||| | Sbjct 18561 GGTCTCGAGGACACGCTCAA-----TGTT----GTC-----ACCC-CAGATACCGACAGA 18605 Query 2073897 GACGCGCATGATCATGTACTGGGGTCGCTCGACGACGGCGTCGCGCACCTTGGTCAGGTA 2073956 ||| ||||| ||||||| ||| |||||||| || | | | |||| ||||| Sbjct 18606 GACACGCATAATCATGTGCTGCGGTCGCTCAACAATCTTACCATCAATCTTGAGGAGGTA 18665 Query 2073957 GGACCGACGCAGGGTCGCCAGGCCAAAGTACGAGTAGGCCAGGTCGCGCTCGTGGCGGAT 2074016 || || |||||| | ||||||||| |||| | ||||| |||| || Sbjct 18666 AGATCGCTCGAGGGTCTTGAAGCCAAAGTATTGGTAGTTGAAATCGCGATCGTACACAAT 18725 Query 2074017 GGCGGCGTCGAGGGCCTCCTTGTG 2074040 ||| | |||||| |||||||||| Sbjct 18726 GGCAGAGTCGAGCTCCTCCTTGTG 18749 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7916103858088260