Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Calonectria_20pseudonaviculata_20[genbank_20GCA_5F001696505.1_202016
-07-28] 1,340 sequences; 51,439,042 total letters
Query= NC_023639.1
Length=1168989
Score E
Sequences producing significant alignments: (Bits) Value
seq1293 120 2e-21
>seq1293
Length=96073
Score = 120 bits (132), Expect = 2e-21
Identities = 446/693 (64%), Gaps = 11/693 (2%)
Strand=Plus/Minus
Query 281417 TTATCAGCGGCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATT 281476
|| ||| |||| | || || | ||||| |||||||| | ||| || ||||| |||||
Sbjct 74691 TTCTCAACGGCGGAGACGTTCATGATACCGTTGGCATCAACATCGAAGGTGACCTCAATC 74632
Query 281477 TGAGGGACCCCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTA 281536
|| || || || | | ||||| ||||| || | | || |||| || ||
Sbjct 74631 TGGGGAACACCGCGGGGGGCAGGGGGGATGCCGGTGAGCTCGAACTTTCCGAGCAGGTTG 74572
Query 281537 TTATCTTTAGTGAATTTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTA 281596
|| || || ||| | || ||||||||| | | |||||| || | | || ||
Sbjct 74571 TTGTCCTTGGTGCGCTGACGCTCACCCTCGTAGACCTGGATAAGGACACCGGGCTGGTTG 74512
Query 281597 TCTGAATAAGTTGTAAATACTCTGGATTTTTTACAAGGAATTGTTGTGTTTCTATCAATA 281656
|| || | || | || || ||| || || || || || ||||| | ||
Sbjct 74511 TCAGAGAAGGTGGAGAAGACCTCGGACTTCTTGGTGGGGATGGTGGTGTTGCGGGGGATG 74452
Query 281657 ATATTGGTCATAATACCACCAGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACT 281716
| |||||||| ||||||||||| || || | ||| ||||| || |||| |||||| |
Sbjct 74451 AGCTTGGTCATCATACCACCAGCAGTCTCGATACCGAGAGAGAGGGGAGCGACATCGAGA 74392
Query 281717 AGGACAATAT--TTTGAAGTTTTTCATCA-GTTTGACCAACAAGAATAGCTGCTTGAATA 281773
|||| ||| | | | || || | | || | |||| |||||||| || |||| |
Sbjct 74391 AGGAGAATCTCGCTGGTAGACTTGGAGGAGGTGTCACCAGACAGAATAGCAGCCTGAACA 74332
Query 281774 GCAGCACCATATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTG 281833
|||||||| || |||||||| || ||||| || | | | || | | || || |||
Sbjct 74331 GCAGCACCGTAGGCAACAGCCTCGTCAGGGTTGATGGACTTGTTGGGCTCCTTGCCGTTG 74272
Query 281834 AAAAAATTTGAAAGAAGTTGTCT-TACCTTAGGAATACGAGATGATCCTCCAACTAATAC 281892
|| | | | || || | ||| || ||| ||||| | || || ||||| | ||
Sbjct 74271 AAGTAGTCGGTAATGAGCT-TCTGGACACGAGGGATACGTGTAGAGCCGCCAACGAGAAC 74213
Query 281893 AATTTCATGCACCTGTGATTTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTC 281952
||| || || ||| | ||||| | || | || | || || || ||||| |
Sbjct 74212 AATCTCGTGGACCAGGCTCTTATCGATCTTGGCGTCAGACAAGACGCGGTCGACGGGCTG 74153
Query 281953 AAGACCAGCTCTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAA---GAGT 282009
|| | || | || | ||| ||||| || || || |||| ||||| |||
Sbjct 74152 AATAGTAGAGCGGAAAAGGTCCTGGCAAAGCTCCTCAAAACGGGCTCGAGTAATCGAAGT 74093
Query 282010 GACATTATAATCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGA 282069
| | |||||| || ||||| | ||| || | |||||||| ||| |||| || ||
Sbjct 74092 G---TAGAAATCAACACCCTCGAAGAGAGAGTCGATTTCAATCGAAGTCTGAGCAGAGGA 74036
Query 282070 AGATAGTGCACGTTTAGCACGTTCACATGCTGT 282102
||| || | |||||| ||||| ||||| || ||
Sbjct 74035 AGACAGAGTACGTTTGGCACGCTCACAGGCAGT 74003
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 3740564611662840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |