Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calonectria_20pseudonaviculata_20[genbank_20GCA_5F001696505.1_202016 -07-28] 1,340 sequences; 51,439,042 total letters Query= NC_023639.1 Length=1168989 Score E Sequences producing significant alignments: (Bits) Value seq1293 120 2e-21 >seq1293 Length=96073 Score = 120 bits (132), Expect = 2e-21 Identities = 446/693 (64%), Gaps = 11/693 (2%) Strand=Plus/Minus Query 281417 TTATCAGCGGCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATT 281476 || ||| |||| | || || | ||||| |||||||| | ||| || ||||| ||||| Sbjct 74691 TTCTCAACGGCGGAGACGTTCATGATACCGTTGGCATCAACATCGAAGGTGACCTCAATC 74632 Query 281477 TGAGGGACCCCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTA 281536 || || || || | | ||||| ||||| || | | || |||| || || Sbjct 74631 TGGGGAACACCGCGGGGGGCAGGGGGGATGCCGGTGAGCTCGAACTTTCCGAGCAGGTTG 74572 Query 281537 TTATCTTTAGTGAATTTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTA 281596 || || || ||| | || ||||||||| | | |||||| || | | || || Sbjct 74571 TTGTCCTTGGTGCGCTGACGCTCACCCTCGTAGACCTGGATAAGGACACCGGGCTGGTTG 74512 Query 281597 TCTGAATAAGTTGTAAATACTCTGGATTTTTTACAAGGAATTGTTGTGTTTCTATCAATA 281656 || || | || | || || ||| || || || || || ||||| | || Sbjct 74511 TCAGAGAAGGTGGAGAAGACCTCGGACTTCTTGGTGGGGATGGTGGTGTTGCGGGGGATG 74452 Query 281657 ATATTGGTCATAATACCACCAGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACT 281716 | |||||||| ||||||||||| || || | ||| ||||| || |||| |||||| | Sbjct 74451 AGCTTGGTCATCATACCACCAGCAGTCTCGATACCGAGAGAGAGGGGAGCGACATCGAGA 74392 Query 281717 AGGACAATAT--TTTGAAGTTTTTCATCA-GTTTGACCAACAAGAATAGCTGCTTGAATA 281773 |||| ||| | | | || || | | || | |||| |||||||| || |||| | Sbjct 74391 AGGAGAATCTCGCTGGTAGACTTGGAGGAGGTGTCACCAGACAGAATAGCAGCCTGAACA 74332 Query 281774 GCAGCACCATATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTG 281833 |||||||| || |||||||| || ||||| || | | | || | | || || ||| Sbjct 74331 GCAGCACCGTAGGCAACAGCCTCGTCAGGGTTGATGGACTTGTTGGGCTCCTTGCCGTTG 74272 Query 281834 AAAAAATTTGAAAGAAGTTGTCT-TACCTTAGGAATACGAGATGATCCTCCAACTAATAC 281892 || | | | || || | ||| || ||| ||||| | || || ||||| | || Sbjct 74271 AAGTAGTCGGTAATGAGCT-TCTGGACACGAGGGATACGTGTAGAGCCGCCAACGAGAAC 74213 Query 281893 AATTTCATGCACCTGTGATTTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTC 281952 ||| || || ||| | ||||| | || | || | || || || ||||| | Sbjct 74212 AATCTCGTGGACCAGGCTCTTATCGATCTTGGCGTCAGACAAGACGCGGTCGACGGGCTG 74153 Query 281953 AAGACCAGCTCTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAA---GAGT 282009 || | || | || | ||| ||||| || || || |||| ||||| ||| Sbjct 74152 AATAGTAGAGCGGAAAAGGTCCTGGCAAAGCTCCTCAAAACGGGCTCGAGTAATCGAAGT 74093 Query 282010 GACATTATAATCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGA 282069 | | |||||| || ||||| | ||| || | |||||||| ||| |||| || || Sbjct 74092 G---TAGAAATCAACACCCTCGAAGAGAGAGTCGATTTCAATCGAAGTCTGAGCAGAGGA 74036 Query 282070 AGATAGTGCACGTTTAGCACGTTCACATGCTGT 282102 ||| || | |||||| ||||| ||||| || || Sbjct 74035 AGACAGAGTACGTTTGGCACGCTCACAGGCAGT 74003 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3740564611662840