Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calonectria_20pseudonaviculata_20[genbank_20GCA_5F001696505.1_202016 -07-28] 1,340 sequences; 51,439,042 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq907 168 6e-37 seq1144 127 2e-24 seq732 111 2e-19 seq897 89.7 5e-13 >seq907 Length=75695 Score = 168 bits (186), Expect = 6e-37 Identities = 745/1164 (64%), Gaps = 43/1164 (4%) Strand=Plus/Plus Query 148638 AACGCGTCGGCAAGGCCCTGTACGCCCACGCCAATGGGCCGGTGTTTAATGTTGGAGAGG 148697 || || || ||||| ||||| || || || |||||||| ||||| |||||| | Sbjct 17590 AATGCATCCGCAAGACCCTGGACACCAACACCAATGGGTCGGTGACGCATGTTGCTGTTA 17649 Query 148698 CGCGCGCTCTCGAGC-GGATAGTGGTTGCGGTCGATGATCTTGTCAAGATTGCGCACCAC 148756 || || ||| || | |||||||||||| ||| |||||||||| ||| ||||| || || Sbjct 17650 CGAGC-CTCCTGAACAGGATAGTGGTTGACGTCAATGATCTTGTTAAGGTTGCGAACGAC 17708 Query 148757 CACCTTTGTAATTCTGCGCAGC------AATTCAAA---ATCGTACTTGTCATCTACGAT 148807 || || | | |||| || ||| | ||| | ||| || || | Sbjct 17709 AGTCTGAGTGACATCGTGCAGTTTTTGGAAGTCATAGCAATCATTGCTGTAGTCAACAAA 17768 Query 148808 GCATCGGTTCACGGCGATAGAGGCTAGATTGCACACGGCCGTCTCATCCGGGGCGCTGTA 148867 | | | ||| | || || || ||||| ||||| |||||| || |||||||| Sbjct 17769 AGAAGGA---AGGGCCAGGGAAGCGAGGTTGCAGACGGCGACCTCATCAGGAGCGCTGTA 17825 Query 148868 CTCTACGATCTCGGCGCACAGATTG---CTGCATTTGATCACGCCCACGTTCTTTTGATT 148924 || | |||||| | ||| || ||| |||| ||| || | |||||| || || Sbjct 17826 TTCGATGATCTCAGTGCAAAGGTTGGAACTGCG---GATAGTACCGAGGTTCTTCTGGTT 17882 Query 148925 GCTCTTGCTGTTGCACGCG-TCCTTGTACAGCATGTACGGTCCGCCAGTTTCCACCTGCG 148983 ||||||| |||| || | |||||||| |||||| | || ||||||||| ||| | Sbjct 17883 ACTCTTGCGGTTGG-CGTGATCCTTGTAAAGCATGAAGGGGTTGCCAGTTTCGGTCTGAG 17941 Query 148984 TTTCCACTATGAACCGATGCAGGTCCTGCGCGCGCACTTGCTGCTCGTAGCGACCCT--- 149040 || | ||| || ||| | | | || ||| || || | |||||| | Sbjct 17942 CCTCGAGAATGG--CGTACCAGAGCTTTTGGGC---CTTCATGGTCTT-GCGACCTTTGC 17995 Query 149041 ---CCTGCTCGTA--TAAAGTATACAGCCGCTCGAACGCCTCGCCGTAGCAATCGTCGAG 149095 ||| |||||| | ||| | |||| || ||| | ||||| ||||| || | || Sbjct 17996 CGGCCTTCTCGTAGCTCTCGTAGAGAGCC--TCAAACTCATCGCCATAGCAGTCAGCAAG 18053 Query 149096 ACCGGGGCACTTGTGCGGGCACATGAGCGACCACACGCCGTCCGCGTACACGCGCTTCAT 149155 ||| ||||||| || || ||||| || | ||| |||||| | | ||| |||||||| Sbjct 18054 ACCAGGGCACTCGTTGGGACACATTAGAGTCCAGTCGCCGTTCTTCTCCACACGCTTCAT 18113 Query 149156 AAACAGATCGGGCACCCAGAGCGCGTACATGAGGTCGCGCGCCTTGCAGTCTTCGGCGCC 149215 |||| |||||| | ||| || ||| | ||||| || || | || || || Sbjct 18114 GAACAAATCGGGGATCCACAGAGCGAGGAACAGGTCACGAGCACGGACCTCCTCCTTTCC 18173 Query 149216 CATGTTGCGGCGCAGGTTGAGCACGCTGAATATGTCCGCGTGCCACGGCTCAATGTACAC 149275 ||| ||| || | || | ||||| ||| |||||||| ||||| | ||| | Sbjct 18174 ATGGTTCTTGCGAAGATCCAGAAATTCGAATACGTCGGCGTGCCAAGGCTCGAGGTAGAT 18233 Query 149276 CGCGAGCGCGCCCTTGCGCTTG---CCGCCCTGGTCGACGTGGCGCACCATGTTGTTAAA 149332 |||| || || |||||| || ||||| || || | || | ||||||| || Sbjct 18234 GGCGAAAGCACCGGGTCGCTTGTTGCCACCCTGATCAACATATCGAGCAGTGTTGTTGAA 18293 Query 149333 CACTCGAACCATAGGTTCAATGCCACTGGCAGTGCCGTTAGTAGAGCTAATGCGACTGCC 149392 || || | ||| ||| | || ||| || ||||| ||| | ||| | ||| Sbjct 18294 TACACGGAGCATGGGTGTCACACCGTTGGAGGTACCGTTGGTACCGGCAATATAAGAGCC 18353 Query 149393 GCGCGCTCGCACTTTGTGCACGTTGACGCCGATGCCGCC-GCCGTACTTTGAGATGGCCG 149451 || || | ||| ||||||| |||||||| || ||| | || ||||| | Sbjct 18354 AGTGGCACGGATACGGTGAACGTTGAGACCGATGCCACCAGCCATT-TTGGAGATCATGG 18412 Query 149452 CGCAGTCGCCGAGCGTCGAGTAGATGCCCTCGATGCTGTCGCGCTTCATGGTCAGCAGAA 149511 | ||| ||| || || || ||||| || ||||| ||||||| | ||| | Sbjct 18413 CACAGGTCTTGAGGGTGTCATAAATACCCTCAATACTGTCCTCCTTCATGTCGACCAGGA 18472 Query 149512 AGCACGAGCACATTTGCGGAAAACGCGTGCCGGCCGCGAACATGGTGGGGCTGGCGTGTG 149571 |||| || ||| || || | | || || || ||| | ||||| || |||| Sbjct 18473 AGCATGAAGACAGCTGGGGCTGAGGAGTACCAGCGTTGAAGAGTGTGGGAGAAGCATGTG 18532 Query 149572 TAAAATATTTCTGGCTCATCATCTCGTACGACTCGAGCACGCGGTCCATGTCATCGCCAT 149631 | || | ||| | ||| | | ||| | |||||| || || || |||| || || Sbjct 18533 TGAAGAACTTCATGGACATGAGGTTGTAGGTCTCGAGGACACGCTCAATGTTGTCACCCC 18592 Query 149632 GGATGCCTATGGCGACGCGCATCAGCATATGCTGCGGTCGCTCCGCCACTTTGTTTCCAA 149691 ||| || | | ||| ||||| | ||| |||||||||||||| | | || ||| Sbjct 18593 AGATACCGACAGAGACACGCATAATCATGTGCTGCGGTCGCTCAACAATCTTACCATCAA 18652 Query 149692 TTTTGAGCAAGTAGCCGTTTTCTAGTGTCTTGTAGCCAAAGTACTTGTAGTCAAAGTCGC 149751 | ||||| | ||| || || |||||| |||||||||| | ||||| || |||| Sbjct 18653 TCTTGAGGAGGTAAGATCGCTCGAGGGTCTTGAAGCCAAAGTATTGGTAGTTGAAATCGC 18712 Query 149752 GGCCGTGGTCAATGGCGGCGTCGA 149775 | ||| ||||||| | ||||| Sbjct 18713 GATCGTACACAATGGCAGAGTCGA 18736 >seq1144 Length=167757 Score = 127 bits (140), Expect = 2e-24 Identities = 149/199 (75%), Gaps = 2/199 (1%) Strand=Plus/Minus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521 ||||||||| ||||| || |||||||| | || | | | ||||| |||||||| | Sbjct 91862 GGTGGACTCCTTCTGAATGTTGTAATCAGAGAGTGTTCGGCCA-TCCTCAAGCTGCTTTC 91804 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 | ||| ||||||| ||||||||||| ||||| || || ||||| || |||||| || Sbjct 91803 CGGCGAAAATGAGTCGCTGCTGGTCCGGAGGAATTCCCTCCTTATCCTGGATCTTCGACT 91744 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 | | | |||| ||||||| | |||||| |||| ||| | || ||||| || |||| Sbjct 91743 TAACGTTGTCAATAGTGTCGGACGACTCCACCTCGAGGGTAATAGTCTTGCCAGTGAGAG 91684 Query 133642 TTTTTACGAAAATCTGCAT 133660 | || |||||||||||||| Sbjct 91683 TCTTGACGAAAATCTGCAT 91665 Score = 104 bits (114), Expect = 2e-17 Identities = 138/189 (73%), Gaps = 2/189 (1%) Strand=Plus/Minus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521 ||| ||||||||||| |||||||| ||| | || | | | ||||| |||||||||| Sbjct 91634 GGTAGACTCTTTCTGGATATTGTAGTCGGAAAGGGTTCGGCCA-TCCTCAAGCTGCTTGC 91576 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 | || | ||||| ||||||||||| || ||||||||||||||||| |||||| || Sbjct 91575 CAGCAAAGATGAGACGCTGCTGGTCCGGGGGGATGCCTTCCTTGTCCTGAATCTTTGACT 91516 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 | | | || | || || | | ||| || |||| |||| ||| ||||| || || | Sbjct 91515 TAACGTTGTCGATGGTATCAGAAGACTCGACCTCGAGAGTGATGGTCTTGCCAGTGAGGG 91456 Query 133642 TTTTTACGA 133650 | || |||| Sbjct 91455 TCTTGACGA 91447 Score = 100 bits (110), Expect = 3e-16 Identities = 130/177 (73%), Gaps = 2/177 (1%) Strand=Plus/Minus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521 ||| ||||| ||||| || ||||| ||| | || | | | ||||| |||||||||| Sbjct 91350 GGTAGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTTCGGCCA-TCCTCAAGCTGCTTGC 91292 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 | || | ||||| ||||||||||| || ||||||||||||||||| |||||| || Sbjct 91291 CAGCAAAGATGAGACGCTGCTGGTCCGGGGGGATGCCTTCCTTGTCCTGAATCTTTGACT 91232 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCA 133638 ||| | || | || |||| || ||| || |||| ||||| || || || |||| Sbjct 91231 TGACGTTGTCGATGGTATCGGAGGACTCGACCTCGAGGGTGATAGTCTTTCCCGTCA 91175 Score = 100 bits (110), Expect = 3e-16 Identities = 143/199 (72%), Gaps = 2/199 (1%) Strand=Plus/Minus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521 ||||||||| ||||| || |||||||| | || | | | ||||| |||||||| | Sbjct 92090 GGTGGACTCCTTCTGAATGTTGTAATCAGAGAGGGTTCGGCCA-TCCTCAAGCTGCTTTC 92032 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 | ||| ||||||| ||||||||||| ||||| || || ||||| || |||||| || Sbjct 92031 CGGCGAAAATGAGTCGCTGCTGGTCCGGAGGAATTCCCTCCTTATCCTGGATCTTCGACT 91972 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 | | | |||| ||||||| | ||| || || | ||| | || || || |||| || Sbjct 91971 TAACGTTGTCAATAGTGTCGGATGACTCGACCTCAAGGGTAATCGTCTTTCCAGTCAAAG 91912 Query 133642 TTTTTACGAAAATCTGCAT 133660 | || || || || ||||| Sbjct 91911 TCTTCACAAAGATTTGCAT 91893 >seq732 Length=233276 Score = 111 bits (122), Expect = 2e-19 Identities = 142/193 (74%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 133469 CTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCCCGCGT 133527 ||| ||||| || ||||| |||| || ||| | | | |||||||||||||| || || Sbjct 60378 CTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCA-TCCTCGAGCTGCTTACCAGCAA 60436 Query 133528 AAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTGAGCT 133587 | || || ||||||||||| || || ||||| |||||||| |||||| ||||| | Sbjct 60437 AGATAAGTCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACGT 60496 Query 133588 GCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTTTTTA 133647 || | ||||||| | |||||| || | ||||| || || || || || || || | Sbjct 60497 TGTCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATCGTCTTCCCCGTGAGGGTCTTGA 60556 Query 133648 CGAAAATCTGCAT 133660 |||| |||||||| Sbjct 60557 CGAAGATCTGCAT 60569 >seq897 Length=151945 Score = 89.7 bits (98), Expect = 5e-13 Identities = 108/147 (73%), Gaps = 0/147 (0%) Strand=Plus/Minus Query 133506 TCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTG 133565 |||||||| |||||||| || | || || ||||||||||| || || || || |||||| Sbjct 73668 TCCTCGAGTTGCTTGCCAGCAAAGATCAGGCGCTGCTGGTCCGGGGGAATACCCTCCTTG 73609 Query 133566 TCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACG 133625 || |||||| ||||| | || | ||||| | || ||| || || | ||||| | Sbjct 73608 TCCTGGATCTTGGACTTGACATTGTCGATGGTGTCCGAGGACTCGACCTCAAGGGTGATG 73549 Query 133626 GTTTTGCCGGTCAGAGTTTTTACGAAA 133652 || ||||| || || || || |||||| Sbjct 73548 GTCTTGCCCGTGAGGGTCTTCACGAAA 73522 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483412702701600