Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calonectria_20pseudonaviculata_20[genbank_20GCA_5F001696505.1_202016 -07-28] 1,340 sequences; 51,439,042 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq1144 84.2 1e-11 >seq1144 Length=167757 Score = 84.2 bits (92), Expect = 1e-11 Identities = 143/205 (70%), Gaps = 2/205 (1%) Strand=Plus/Minus Query 33547 TGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGT 33606 || || ||| ||| || || ||||||||||| ||||| || || | || || | || Sbjct 92095 TGAAGGGTGGACTCCTTCTGAATGTTGTAATCAGAGAGGGTTCGGCCATCCTCAAGCTGC 92036 Query 33607 TTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTC 33666 |||||||| ||||| | |||||||| || | || | || || || || || ||| Sbjct 92035 TTTCCGGCGAAAATGAGTCGCTGCTGGTCCGGAGGAATTCCCTCCTTATCCTGGATCTTC 91976 Query 33667 TGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTGT 33725 | | ||| | ||| | |||||| ||| || || |||| || ||||| || || || Sbjct 91975 -GACTTAACGTTGTCAATAGTGTCGGATGACTCGACCTCAAGGGTAATCGTCTTTCCAGT 91917 Query 33726 TAACGTTTTTACAAAGATCTGCATA 33750 || || || |||||||| |||||| Sbjct 91916 CAAAGTCTTCACAAAGATTTGCATA 91892 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328698631852800