Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calonectria_20pseudonaviculata_20[genbank_20GCA_5F001696505.1_202016 -07-28] 1,340 sequences; 51,439,042 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq1144 95.1 3e-14 >seq1144 Length=167757 Score = 95.1 bits (104), Expect = 3e-14 Identities = 138/195 (71%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 206184 CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATC 206243 ||| || ||||| || || || |||||| | || || || |||||| || |||| Sbjct 91451 CAAGACCCTCACTGGCAAGACCATCACTCTCGAGGTCGAGTCTTCTGATACCATCGACAA 91510 Query 206244 AGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303 || ||| ||||||||| || || ||||| || |||||| || | || ||||| Sbjct 91511 CGTTAAGTCAAAGATTCAGGACAAGGAAGGCATCCCCCCGGACCAGCAGCGTCTCATCTT 91570 Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363 || || |||||| | || ||||| | || | |||| ||||| ||||||||||||| Sbjct 91571 TGCTGGCAAGCAGCTTGAGGATGGCCGAACCCTTTCCGACTACAATATCCAGAAAGAGTC 91630 Query 206364 TACTCTTCACCTTGT 206378 ||| || ||||| || Sbjct 91631 TACCCTCCACCTGGT 91645 Score = 86.0 bits (94), Expect = 1e-11 Identities = 94/125 (75%), Gaps = 0/125 (0%) Strand=Plus/Plus Query 206254 AAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAG 206313 ||||| || || || || |||||| |||||| || |||| || |||||||||||| Sbjct 91977 AAGATCCAGGATAAGGAGGGAATTCCTCCGGACCAGCAGCGACTCATTTTCGCCGGAAAG 92036 Query 206314 CAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCAC 206373 ||| | || ||||| | || | | ||||||||| | ||||| ||||| || |||||| Sbjct 92037 CAGCTTGAGGATGGCCGAACCCTCTCTGATTACAACATTCAGAAGGAGTCCACCCTTCAC 92096 Query 206374 CTTGT 206378 ||||| Sbjct 92097 CTTGT 92101 Score = 84.2 bits (92), Expect = 5e-11 Identities = 142/206 (69%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| || ||| || ||||| || || || || || | || ||||| || ||| Sbjct 91668 CAGATTTTCGTCAAGACTCTCACTGGCAAGACTATTACCCTCGAGGTGGAGTCGTCCGAC 91727 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || | || || ||| ||||| || || || || |||||| |||||| || Sbjct 91728 ACTATTGACAACGTTAAGTCGAAGATCCAGGATAAGGAGGGAATTCCTCCGGACCAGCAG 91787 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 |||| || ||||||||||||||| | || ||||| | || | | ||||||||| | Sbjct 91788 CGACTCATTTTCGCCGGAAAGCAGCTTGAGGATGGCCGAACACTCTCTGATTACAACATT 91847 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGT 206378 ||||| ||||| || || ||||| || Sbjct 91848 CAGAAGGAGTCCACCCTCCACCTGGT 91873 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181800509614140