Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calonectria_20pseudonaviculata_20[genbank_20GCA_5F001696505.1_202016 -07-28] 1,340 sequences; 51,439,042 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq881 98.7 1e-15 >seq881 Length=186784 Score = 98.7 bits (108), Expect = 1e-15 Identities = 192/281 (68%), Gaps = 6/281 (2%) Strand=Plus/Plus Query 147232 AGCTGGTCCACGCCCTGGCCCCCGTAGTTTGTCCCGCAGTCCACGTACCTGGCCCCAAAG 147291 |||||||| || ||||||||| ||| | ||| | |||| |||||| || |||||| Sbjct 108324 AGCTGGTCGACTCCCTGGCCCGTGTAATCCGTCTTGTAGTCGACGTACTCTGCGCCAAAG 108383 Query 147292 TGCCTCCACTGGAAGCCGTACACTGGCCCCAGGTCGCCGGGCTTTCTGTGCGAGAAGCCC 147351 |||| ||||||||||||||| || || || |||||||| || | ||| | |||||| Sbjct 108384 TGCCGCCACTGGAAGCCGTAAACAGGGCCGAGGTCGCCCTCCTCACGGTGTGTCAAGCCC 108443 Query 147352 GCCCGCTTGAGAAACTCGGGGGACCCGTGGGCGTCCCAGATGCCCACTCC--CTTGGCGG 147409 | ||| || ||| |||| || | | ||||| || | || | | || | Sbjct 108444 AGGTTATCGAGGAATTCGCGGGATCCATTTCCATCCCAAATCTTGATCCCAGCCTCGCTG 108503 Query 147410 AGAGCTCCTTAGAGTCCGTGGAGCCCCGGATGAACCAGAGCAGCTCCTCCAAAACCCCCC 147469 |||| |||| || ||| |||| |||||||||||| || ||| | | || | | Sbjct 108504 AGAG--CCTTGGAAGATGTGTTGCCCTCGATGAACCAGAGTAGTTCCGCAATGACGGCTC 108561 Query 147470 TCCAAAAGACCCTCTTGGTGGTCAGCAGGGG--GAACTGGT 147508 | ||| || | ||| ||||| || ||||| |||| ||| Sbjct 108562 TGGTAAAAACTCGCTTCGTGGTGAGGAGGGGCAGAACGGGT 108602 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583478226576000