Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calonectria_20pseudonaviculata_20[genbank_20GCA_5F001696505.1_202016 -07-28] 1,340 sequences; 51,439,042 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq1157 100 4e-15 >seq1157 Length=14967 Score = 100 bits (110), Expect = 4e-15 Identities = 205/300 (68%), Gaps = 5/300 (2%) Strand=Plus/Plus Query 1455775 GATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACC 1455834 ||| ||| | |||||| || ||| |||||| ||||| |||||||||||||| | || | Sbjct 10252 GATCTGGCAGATGTAC-AAGAAGCACGAGGCTTCCTTCTGGACCGCCGAGGAAATTGATC 10310 Query 1455835 TCGGCGCCGACACGGTCCACTGGGTGT--CGCT-GAGCGACGACGAGCGCCATTTCATCA 1455891 | | || | | ||||| |||| || | || |||| ||| || Sbjct 10311 TTTCCAAGGATCTGCACGACTGGAATAACCGCTTGAATGCAGATGAGCAGTTCTTCGTCT 10370 Query 1455892 AGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGCCGGC 1455951 ||| | ||||| ||| |||||||| ||||| || ||| || ||||||| || Sbjct 10371 CTCACATTCTCGC-TTTCTTCGCCGCATCTGATGGTATTGTGAATGAAAACCTGGTCGAG 10429 Query 1455952 CGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGATCGCC 1456011 | || | |||||||| | || ||||| |||| || ||||| ||||||||| Sbjct 10430 AGGTTCAGTGCCGAGGTCCAGATCCCTGAGGCTCGTTGCTTCTACGGTTTCCAGATCATG 10489 Query 1456012 ATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGACCCG 1456071 || || ||||||||||| || || ||||| ||||| || ||||| ||| |||| || ||| Sbjct 10490 ATGGAGAACATCCACTCAGAGACTTACTCTCTCCTCATTGACACATACATCAAAGAGCCG 10549 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177681954537080