Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Calonectria_20pseudonaviculata_20[genbank_20GCA_5F001696505.1_202016
-07-28] 1,340 sequences; 51,439,042 total letters
Query= NC_026511.1
Length=140913
Score E
Sequences producing significant alignments: (Bits) Value
seq732 125 6e-24
seq1144 120 3e-22
seq897 89.7 5e-13
>seq732
Length=233276
Score = 125 bits (138), Expect = 6e-24
Identities = 148/198 (75%), Gaps = 2/198 (1%)
Strand=Plus/Plus
Query 35540 GTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCC 35599
|| |||||||| || |||||||| ||| || ||| || | || || |||||||||||
Sbjct 60373 GTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTACCA 60432
Query 35600 GCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTC 35659
||||| || | ||||||||||||| |||| || |||||||||| |||||| |||
Sbjct 60433 GCAAAGATAAGTCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTG 60492
Query 35660 AGAGTTG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGT 35718
| |||| | | |||||| || |||||||| | |||||||| || ||||| | ||
Sbjct 60493 A-CGTTGTCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATCGTCTTCCCCGTGAGGGT 60551
Query 35719 TTTCACAAATATCTGCAT 35736
|| || || ||||||||
Sbjct 60552 CTTGACGAAGATCTGCAT 60569
>seq1144
Length=167757
Score = 120 bits (132), Expect = 3e-22
Identities = 144/193 (75%), Gaps = 2/193 (1%)
Strand=Plus/Minus
Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604
|||||| |||||||||||||| | | |||||| | || || |||||||| || || ||
Sbjct 92084 CTCCTTCTGAATGTTGTAATCAGAGAGGGTTCGGCCATCCTCAAGCTGCTTTCCGGCGAA 92025
Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664
|| | ||||||||||||| ||||| | |||||| ||| |||||| ||| | ||
Sbjct 92024 AATGAGTCGCTGCTGGTCCGGAGGAATTCCCTCCTTATCCTGGATCTTCGACTT-AACGT 91966
Query 35665 TG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCA 35723
|| | | |||||| || || ||||| | || ||||| || || |||||||| ||||
Sbjct 91965 TGTCAATAGTGTCGGATGACTCGACCTCAAGGGTAATCGTCTTTCCAGTCAAAGTCTTCA 91906
Query 35724 CAAATATCTGCAT 35736
|||| || |||||
Sbjct 91905 CAAAGATTTGCAT 91893
Score = 107 bits (118), Expect = 2e-18
Identities = 141/193 (73%), Gaps = 2/193 (1%)
Strand=Plus/Minus
Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604
|||||| |||||||||||||| | | ||||| | || || |||||||| || || ||
Sbjct 91856 CTCCTTCTGAATGTTGTAATCAGAGAGTGTTCGGCCATCCTCAAGCTGCTTTCCGGCGAA 91797
Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664
|| | ||||||||||||| ||||| | |||||| ||| |||||| ||| | ||
Sbjct 91796 AATGAGTCGCTGCTGGTCCGGAGGAATTCCCTCCTTATCCTGGATCTTCGACTT-AACGT 91738
Query 35665 TG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCA 35723
|| | | |||||| ||| |||||||| | || || || || || || | ||| || |
Sbjct 91737 TGTCAATAGTGTCGGACGACTCCACCTCGAGGGTAATAGTCTTGCCAGTGAGAGTCTTGA 91678
Query 35724 CAAATATCTGCAT 35736
| || ||||||||
Sbjct 91677 CGAAAATCTGCAT 91665
Score = 89.7 bits (98), Expect = 5e-13
Identities = 124/171 (73%), Gaps = 2/171 (1%)
Strand=Plus/Minus
Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604
|||||| || |||||||| |||| | |||||| | || || |||||||| || |||||
Sbjct 91344 CTCCTTCTGGATGTTGTAGTCGGAGAGGGTTCGGCCATCCTCAAGCTGCTTGCCAGCAAA 91285
Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664
|| | ||||||||||||| || | || ||||||||| |||||| ||| | ||
Sbjct 91284 GATGAGACGCTGCTGGTCCGGGGGGATGCCTTCCTTGTCCTGAATCTTTGACTTGA-CGT 91226
Query 35665 TG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCA 35714
|| | | || ||| || || ||||| | ||||| || || |||||||
Sbjct 91225 TGTCGATGGTATCGGAGGACTCGACCTCGAGGGTGATAGTCTTTCCCGTCA 91175
>seq897
Length=151945
Score = 89.7 bits (98), Expect = 5e-13
Identities = 133/189 (70%), Gaps = 0/189 (0%)
Strand=Plus/Minus
Query 35539 CGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACC 35598
|| || | |||| || |||||||| |||| | ||| || | || || || ||||| ||
Sbjct 73711 CGCACGCACCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCCTCGAGTTGCTTGCC 73652
Query 35599 CGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTT 35658
||||| |||| ||||||||||||| |||| | |||||||||| |||||| |||
Sbjct 73651 AGCAAAGATCAGGCGCTGCTGGTCCGGGGGAATACCCTCCTTGTCCTGGATCTTGGACTT 73592
Query 35659 CAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGT 35718
| | | | | ||||| || || ||||| | ||||| || || ||||| | ||
Sbjct 73591 GACATTGTCGATGGTGTCCGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTGAGGGT 73532
Query 35719 TTTCACAAA 35727
||||| ||
Sbjct 73531 CTTCACGAA 73523
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 450786049207200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |