Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calonectria_20pseudonaviculata_20[genbank_20GCA_5F001696505.1_202016 -07-28] 1,340 sequences; 51,439,042 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq732 125 6e-24 seq1144 120 3e-22 seq897 89.7 5e-13 >seq732 Length=233276 Score = 125 bits (138), Expect = 6e-24 Identities = 148/198 (75%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 35540 GTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCC 35599 || |||||||| || |||||||| ||| || ||| || | || || ||||||||||| Sbjct 60373 GTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTACCA 60432 Query 35600 GCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTC 35659 ||||| || | ||||||||||||| |||| || |||||||||| |||||| ||| Sbjct 60433 GCAAAGATAAGTCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTG 60492 Query 35660 AGAGTTG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGT 35718 | |||| | | |||||| || |||||||| | |||||||| || ||||| | || Sbjct 60493 A-CGTTGTCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATCGTCTTCCCCGTGAGGGT 60551 Query 35719 TTTCACAAATATCTGCAT 35736 || || || |||||||| Sbjct 60552 CTTGACGAAGATCTGCAT 60569 >seq1144 Length=167757 Score = 120 bits (132), Expect = 3e-22 Identities = 144/193 (75%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| |||||||||||||| | | |||||| | || || |||||||| || || || Sbjct 92084 CTCCTTCTGAATGTTGTAATCAGAGAGGGTTCGGCCATCCTCAAGCTGCTTTCCGGCGAA 92025 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | ||||||||||||| ||||| | |||||| ||| |||||| ||| | || Sbjct 92024 AATGAGTCGCTGCTGGTCCGGAGGAATTCCCTCCTTATCCTGGATCTTCGACTT-AACGT 91966 Query 35665 TG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCA 35723 || | | |||||| || || ||||| | || ||||| || || |||||||| |||| Sbjct 91965 TGTCAATAGTGTCGGATGACTCGACCTCAAGGGTAATCGTCTTTCCAGTCAAAGTCTTCA 91906 Query 35724 CAAATATCTGCAT 35736 |||| || ||||| Sbjct 91905 CAAAGATTTGCAT 91893 Score = 107 bits (118), Expect = 2e-18 Identities = 141/193 (73%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| |||||||||||||| | | ||||| | || || |||||||| || || || Sbjct 91856 CTCCTTCTGAATGTTGTAATCAGAGAGTGTTCGGCCATCCTCAAGCTGCTTTCCGGCGAA 91797 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | ||||||||||||| ||||| | |||||| ||| |||||| ||| | || Sbjct 91796 AATGAGTCGCTGCTGGTCCGGAGGAATTCCCTCCTTATCCTGGATCTTCGACTT-AACGT 91738 Query 35665 TG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCA 35723 || | | |||||| ||| |||||||| | || || || || || || | ||| || | Sbjct 91737 TGTCAATAGTGTCGGACGACTCCACCTCGAGGGTAATAGTCTTGCCAGTGAGAGTCTTGA 91678 Query 35724 CAAATATCTGCAT 35736 | || |||||||| Sbjct 91677 CGAAAATCTGCAT 91665 Score = 89.7 bits (98), Expect = 5e-13 Identities = 124/171 (73%), Gaps = 2/171 (1%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| |||| | |||||| | || || |||||||| || ||||| Sbjct 91344 CTCCTTCTGGATGTTGTAGTCGGAGAGGGTTCGGCCATCCTCAAGCTGCTTGCCAGCAAA 91285 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | ||||||||||||| || | || ||||||||| |||||| ||| | || Sbjct 91284 GATGAGACGCTGCTGGTCCGGGGGGATGCCTTCCTTGTCCTGAATCTTTGACTTGA-CGT 91226 Query 35665 TG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCA 35714 || | | || ||| || || ||||| | ||||| || || ||||||| Sbjct 91225 TGTCGATGGTATCGGAGGACTCGACCTCGAGGGTGATAGTCTTTCCCGTCA 91175 >seq897 Length=151945 Score = 89.7 bits (98), Expect = 5e-13 Identities = 133/189 (70%), Gaps = 0/189 (0%) Strand=Plus/Minus Query 35539 CGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACC 35598 || || | |||| || |||||||| |||| | ||| || | || || || ||||| || Sbjct 73711 CGCACGCACCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCCTCGAGTTGCTTGCC 73652 Query 35599 CGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTT 35658 ||||| |||| ||||||||||||| |||| | |||||||||| |||||| ||| Sbjct 73651 AGCAAAGATCAGGCGCTGCTGGTCCGGGGGAATACCCTCCTTGTCCTGGATCTTGGACTT 73592 Query 35659 CAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGT 35718 | | | | | ||||| || || ||||| | ||||| || || ||||| | || Sbjct 73591 GACATTGTCGATGGTGTCCGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTGAGGGT 73532 Query 35719 TTTCACAAA 35727 ||||| || Sbjct 73531 CTTCACGAA 73523 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450786049207200