Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calonectria_20pseudonaviculata_20[genbank_20GCA_5F001696505.1_202016 -07-28] 1,340 sequences; 51,439,042 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq732 105 7e-18 seq1144 104 2e-17 >seq732 Length=233276 Score = 105 bits (116), Expect = 7e-18 Identities = 151/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 134505 ACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCG 134564 || ||||| || ||| ||||| || ||||||||||||| | |||| | || ||| Sbjct 60361 ACCAGGTGGAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCG 60420 Query 134565 AGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGA 134624 ||||| || || ||||| || | |||||||| || || || ||||| || || || || Sbjct 60421 AGCTGCTTACCAGCAAAGATAAGTCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGG 60480 Query 134625 ATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTA 134684 || || ||||| ||| | |||||||| || ||||| || || || || || || Sbjct 60481 ATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATCGTCTTC 60540 Query 134685 CCGGTTAAAGTTTTAACGAAAATTTGCATTTTG 134717 || || | || || ||||| || ||||| ||| Sbjct 60541 CCCGTGAGGGTCTTGACGAAGATCTGCATCTTG 60573 >seq1144 Length=167757 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || | ||| || | || ||||| || ||||| ||||| ||||||||||| || Sbjct 91891 CCACCACGGAGGCGGAGGACCAGGTGGAGGGTGGACTCCTTCTGAATGTTGTAATCAGAG 91832 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | || | || || ||||| || || || ||||| | |||||||| || || || Sbjct 91831 AGTGTTCGGCCATCCTCAAGCTGCTTTCCGGCGAAAATGAGTCGCTGCTGGTCCGGAGGA 91772 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 || || || || || || || || || || ||| | ||||||||||| ||||| Sbjct 91771 ATTCCCTCCTTATCCTGGATCTTCGACTTAACGTTGTCAATAGTGTCGGACGACTCCACC 91712 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 ||||| ||||| || || || || | ||| || |||||||| ||||| Sbjct 91711 TCGAGGGTAATAGTCTTGCCAGTGAGAGTCTTGACGAAAATCTGCAT 91665 Score = 100 bits (110), Expect = 3e-16 Identities = 144/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || | ||| || | || ||||| || || || ||||| || |||||||||||| Sbjct 91379 CCACCACGGAGGCGGAGGACTAGGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCGGAG 91320 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | ||| | || || ||||| ||||| ||||| || | ||||||||| || || || Sbjct 91319 AGGGTTCGGCCATCCTCAAGCTGCTTGCCAGCAAAGATGAGACGCTGCTGGTCCGGGGGG 91260 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 |||||||| || || ||||| ||| ||||| ||| | || ||||| || || || Sbjct 91259 ATGCCTTCCTTGTCCTGAATCTTTGACTTGACGTTGTCGATGGTATCGGAGGACTCGACC 91200 Query 134667 TCGAGAGTAATGGTTTTACCGGT 134689 ||||| || || || || || || Sbjct 91199 TCGAGGGTGATAGTCTTTCCCGT 91177 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || | ||| || | || ||||| || ||||| ||||| ||||||||||| || Sbjct 92119 CCGCCACGGAGACGGAGGACAAGGTGAAGGGTGGACTCCTTCTGAATGTTGTAATCAGAG 92060 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | ||| | || || ||||| || || || ||||| | |||||||| || || || Sbjct 92059 AGGGTTCGGCCATCCTCAAGCTGCTTTCCGGCGAAAATGAGTCGCTGCTGGTCCGGAGGA 92000 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 || || || || || || || || || || ||| | |||||||| || || || Sbjct 91999 ATTCCCTCCTTATCCTGGATCTTCGACTTAACGTTGTCAATAGTGTCGGATGACTCGACC 91940 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || ||||| || || || || ||||| || || || |||||||| Sbjct 91939 TCAAGGGTAATCGTCTTTCCAGTCAAAGTCTTCACAAAGATTTGCAT 91893 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505389934576800