Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calonectria_20pseudonaviculata_20[genbank_20GCA_5F001696505.1_202016 -07-28] 1,340 sequences; 51,439,042 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq907 129 5e-25 seq1144 91.5 1e-13 seq732 84.2 2e-11 >seq907 Length=75695 Score = 129 bits (142), Expect = 5e-25 Identities = 292/433 (67%), Gaps = 7/433 (2%) Strand=Plus/Plus Query 131603 GGACATTCGCTGGGACACATTAGCGACCACACGCCGTTCTGTTCAACTCGCTTCATAAAC 131662 || || ||| ||||||||||||| | ||| ||||||||| || || |||||||| ||| Sbjct 18058 GGGCACTCGTTGGGACACATTAGAGTCCAGTCGCCGTTCTTCTCCACACGCTTCATGAAC 18117 Query 131663 AAATCCGGCACCCATAACGCGTACAACAGATCTCTAGCTTTTTTCTCTTCTGTACCCATA 131722 ||||| || | ||| | ||| ||||| || | ||| ||| || | || || Sbjct 18118 AAATCGGGGATCCACAGAGCGAGGAACAGGTCACGAGCACGGACCTCCTCCTTTCC-ATG 18176 Query 131723 AtttttttCAA-ATTTAAAAAGTCCAAAATGTCCGCATGCCAGGGTTCCAAATACACTGC 131781 || || || || | ||| || || | ||| || ||||| || || | || | || Sbjct 18177 GTTCTTGCGAAGATCCAGAAATTCGAATACGTCGGCGTGCCAAGGCTCGAGGTAGATGGC 18236 Query 131782 CATTGCGCCTTTGCGCTTA---CCGCCTTGATTAACATGACGAACCATGTTGTTGTATAC 131838 | || || ||||| || || |||| ||||| ||| | |||||||| |||| Sbjct 18237 GAAAGCACCGGGTCGCTTGTTGCCACCCTGATCAACATATCGAGCAGTGTTGTTGAATAC 18296 Query 131839 GCGCAACATGGGCTCCAAACCGTTGGCGTTTCCATTGGTGCTCTTAATGTAGCTGCCATT 131898 || | |||||| || |||||||| | | || ||||| | ||| || |||| | Sbjct 18297 ACGGAGCATGGGTGTCACACCGTTGGAGGTACCGTTGGTACCGGCAATATAAGAGCCAGT 18356 Query 131899 GGCTCTGATTTTGTGAACGTTGAGTCCAATACCTCC-GCCGTATTTAGAGATTAGTGCGC 131957 ||| | ||| |||||||||||| || || || || ||| | ||| ||||| | || | Sbjct 18357 GGCACGGATACGGTGAACGTTGAGACCGATGCCACCAGCCAT-TTTGGAGATCATGGCAC 18415 Query 131958 ATTTGGTTAGAGTGTTATAGATACCTTCCACGCTGTCCGCGGCAATGTCGACTAAAAAGC 132017 | | | || |||| ||| ||||| || | |||||| | |||||||| | |||| Sbjct 18416 AGGTCTTGAGGGTGTCATAAATACCCTCAATACTGTCCTCCTTCATGTCGACCAGGAAGC 18475 Query 132018 AAGAGGACAACTG 132030 | || |||| ||| Sbjct 18476 ATGAAGACAGCTG 18488 >seq1144 Length=167757 Score = 91.5 bits (100), Expect = 1e-13 Identities = 139/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 27051 GTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCG 27110 || || || || ||||| ||||| || | | | || | || || ||||| || ||| Sbjct 92089 GTGGACTCCTTCTGAATGTTGTAATCAGAGAGGGTTCGGCCATCCTCAAGCTGCTTTCCG 92030 Query 27111 GCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTC 27170 ||| ||||||| ||||| || ||||| || | ||||| ||||| |||||| || Sbjct 92029 GCGAAAATGAGTCGCTGCTGGTCCGGAGGAATTCCCTCCTTATCCTGGATCTTCGACTTA 91970 Query 27171 AGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTT 27230 | | | || | |||||| | | || || || || || || | || || |||| ||| Sbjct 91969 ACGTTGTCAATAGTGTCGGATGACTCGACCTCAAGGGTAATCGTCTTTCCAGTCAAAGTC 91910 Query 27231 TTCACAAAGATTTGCATA 27248 |||||||||||||||||| Sbjct 91909 TTCACAAAGATTTGCATA 91892 >seq732 Length=233276 Score = 84.2 bits (92), Expect = 2e-11 Identities = 133/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 27057 TCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAA 27116 || || || || ||||||||||||| | |||| | || |||||||| ||||| || | Sbjct 60379 TCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTACCAGCAAAG 60438 Query 27117 ATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTT 27176 || || ||||| || ||||| || | ||||| || || ||||||| || | | | Sbjct 60439 ATAAGTCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTG 60498 Query 27177 TCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACA 27236 || | ||||| | | || || || || || || | || ||||| || || || || Sbjct 60499 TCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATCGTCTTCCCCGTGAGGGTCTTGACG 60558 Query 27237 AAGATTTGCAT 27247 ||||| ||||| Sbjct 60559 AAGATCTGCAT 60569 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424927460290080