Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Calonectria_20pseudonaviculata_20[genbank_20GCA_5F001696505.1_202016
-07-28] 1,340 sequences; 51,439,042 total letters
Query= NC_027923.1
Length=132831
Score E
Sequences producing significant alignments: (Bits) Value
seq907 129 5e-25
seq1144 91.5 1e-13
seq732 84.2 2e-11
>seq907
Length=75695
Score = 129 bits (142), Expect = 5e-25
Identities = 292/433 (67%), Gaps = 7/433 (2%)
Strand=Plus/Plus
Query 131603 GGACATTCGCTGGGACACATTAGCGACCACACGCCGTTCTGTTCAACTCGCTTCATAAAC 131662
|| || ||| ||||||||||||| | ||| ||||||||| || || |||||||| |||
Sbjct 18058 GGGCACTCGTTGGGACACATTAGAGTCCAGTCGCCGTTCTTCTCCACACGCTTCATGAAC 18117
Query 131663 AAATCCGGCACCCATAACGCGTACAACAGATCTCTAGCTTTTTTCTCTTCTGTACCCATA 131722
||||| || | ||| | ||| ||||| || | ||| ||| || | || ||
Sbjct 18118 AAATCGGGGATCCACAGAGCGAGGAACAGGTCACGAGCACGGACCTCCTCCTTTCC-ATG 18176
Query 131723 AtttttttCAA-ATTTAAAAAGTCCAAAATGTCCGCATGCCAGGGTTCCAAATACACTGC 131781
|| || || || | ||| || || | ||| || ||||| || || | || | ||
Sbjct 18177 GTTCTTGCGAAGATCCAGAAATTCGAATACGTCGGCGTGCCAAGGCTCGAGGTAGATGGC 18236
Query 131782 CATTGCGCCTTTGCGCTTA---CCGCCTTGATTAACATGACGAACCATGTTGTTGTATAC 131838
| || || ||||| || || |||| ||||| ||| | |||||||| ||||
Sbjct 18237 GAAAGCACCGGGTCGCTTGTTGCCACCCTGATCAACATATCGAGCAGTGTTGTTGAATAC 18296
Query 131839 GCGCAACATGGGCTCCAAACCGTTGGCGTTTCCATTGGTGCTCTTAATGTAGCTGCCATT 131898
|| | |||||| || |||||||| | | || ||||| | ||| || |||| |
Sbjct 18297 ACGGAGCATGGGTGTCACACCGTTGGAGGTACCGTTGGTACCGGCAATATAAGAGCCAGT 18356
Query 131899 GGCTCTGATTTTGTGAACGTTGAGTCCAATACCTCC-GCCGTATTTAGAGATTAGTGCGC 131957
||| | ||| |||||||||||| || || || || ||| | ||| ||||| | || |
Sbjct 18357 GGCACGGATACGGTGAACGTTGAGACCGATGCCACCAGCCAT-TTTGGAGATCATGGCAC 18415
Query 131958 ATTTGGTTAGAGTGTTATAGATACCTTCCACGCTGTCCGCGGCAATGTCGACTAAAAAGC 132017
| | | || |||| ||| ||||| || | |||||| | |||||||| | ||||
Sbjct 18416 AGGTCTTGAGGGTGTCATAAATACCCTCAATACTGTCCTCCTTCATGTCGACCAGGAAGC 18475
Query 132018 AAGAGGACAACTG 132030
| || |||| |||
Sbjct 18476 ATGAAGACAGCTG 18488
>seq1144
Length=167757
Score = 91.5 bits (100), Expect = 1e-13
Identities = 139/198 (70%), Gaps = 0/198 (0%)
Strand=Plus/Minus
Query 27051 GTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCG 27110
|| || || || ||||| ||||| || | | | || | || || ||||| || |||
Sbjct 92089 GTGGACTCCTTCTGAATGTTGTAATCAGAGAGGGTTCGGCCATCCTCAAGCTGCTTTCCG 92030
Query 27111 GCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTC 27170
||| ||||||| ||||| || ||||| || | ||||| ||||| |||||| ||
Sbjct 92029 GCGAAAATGAGTCGCTGCTGGTCCGGAGGAATTCCCTCCTTATCCTGGATCTTCGACTTA 91970
Query 27171 AGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTT 27230
| | | || | |||||| | | || || || || || || | || || |||| |||
Sbjct 91969 ACGTTGTCAATAGTGTCGGATGACTCGACCTCAAGGGTAATCGTCTTTCCAGTCAAAGTC 91910
Query 27231 TTCACAAAGATTTGCATA 27248
||||||||||||||||||
Sbjct 91909 TTCACAAAGATTTGCATA 91892
>seq732
Length=233276
Score = 84.2 bits (92), Expect = 2e-11
Identities = 133/191 (70%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 27057 TCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAA 27116
|| || || || ||||||||||||| | |||| | || |||||||| ||||| || |
Sbjct 60379 TCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTACCAGCAAAG 60438
Query 27117 ATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTT 27176
|| || ||||| || ||||| || | ||||| || || ||||||| || | | |
Sbjct 60439 ATAAGTCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTG 60498
Query 27177 TCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACA 27236
|| | ||||| | | || || || || || || | || ||||| || || || ||
Sbjct 60499 TCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATCGTCTTCCCCGTGAGGGTCTTGACG 60558
Query 27237 AAGATTTGCAT 27247
||||| |||||
Sbjct 60559 AAGATCTGCAT 60569
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 424927460290080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |