Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calonectria_20pseudonaviculata_20[genbank_20GCA_5F001696505.1_202016 -07-28] 1,340 sequences; 51,439,042 total letters Query= NC_027925.1 Length=496396 Score E Sequences producing significant alignments: (Bits) Value seq907 93.3 1e-13 seq1157 86.0 2e-11 >seq907 Length=75695 Score = 93.3 bits (102), Expect = 1e-13 Identities = 200/292 (68%), Gaps = 14/292 (5%) Strand=Plus/Minus Query 254980 ACCAATGATCCGTGTGTTCAACAACGTGGCTCGCTACGTCGATCAAGGGGGCGGCAAACG 255039 ||| ||| ||||||| ||||||||| ||||| || || ||||| || ||| ||| || Sbjct 18309 ACCCATGCTCCGTGTATTCAACAACACTGCTCGATATGTTGATCAGGGTGGCAACAAGCG 18250 Query 255040 CCCAGGAGCGTTCACCATCTACCTGGAGCCGTGGCACGCCGAC--ATT-GAACGGTTTTT 255096 || || || ||| |||||||||| ||||| |||||||||||| ||| ||| ||| Sbjct 18249 ACCCGGTGCTTTCGCCATCTACCTCGAGCCTTGGCACGCCGACGTATTCGAA-----TTT 18195 Query 255097 ACTGCTGTCCGACAAGACC---GGCACCGAGGAGCTGATCGCCCGCGACATCTACACCGC 255153 | | | || ||||| | || | |||||| | || || ||| | | | ||| Sbjct 18194 CTGGATCTTCG-CAAGAACCATGGAAAGGAGGAGGTCCGTGCTCGTGACCTGTTCCTCGC 18136 Query 255154 TGTCTGGTGCTGCGATCTGTTTATGCGACGCGTGGA-ACGAGACGAGACCTGGAGCCTCA 255212 | | ||| | |||| |||| ||| || ||||| | || ||| ||||| || | Sbjct 18135 TCTGTGGATCCCCGATTTGTTCATGAAGCGTGTGGAGAAGA-ACGGCGACTGGACTCTAA 18077 Query 255213 TGTGTCCCAACTTATCGCCCGGTCTAGTCGACTCTTGGGGTGACGAGTTTGA 255264 ||||||||||| | || ||||| | |||| | || || |||||||| Sbjct 18076 TGTGTCCCAACGAGTGCCCTGGTCTTGCTGACTGCTATGGCGATGAGTTTGA 18025 >seq1157 Length=14967 Score = 86.0 bits (94), Expect = 2e-11 Identities = 115/159 (72%), Gaps = 1/159 (1%) Strand=Plus/Plus Query 443709 CGACTAGTCGCTTTTGCTGTGGTCGAAGGACTGTTGTTTAGCGGCAGCTTTAGCCTCCAT 443768 || || || || || |||| ||||| || | || || ||||| || || || || || Sbjct 10709 CGTCTCGTTGCATTCGCTGCTGTCGAGGGTATATTTTTCAGCGGT-GCATTCGCTTCTAT 10767 Query 443769 CTTCTGGTTGAAAAAGCGTGGACTTATGCACGGTCTGACCTTTAGTAACGAACTGATCAG 443828 |||||||||||| ||||| || ||||||| ||| | ||||| ||| || || ||| Sbjct 10768 CTTCTGGTTGAAGAAGCGAGGTCTTATGCCTGGTTTAACCTTCTCTAATGAGCTCATCTC 10827 Query 443829 TCGGGACGAGGGTTTGCATTGCGACTTCGCCTGTCTTCT 443867 ||| || |||||| | || |||||||| || ||||| Sbjct 10828 TCGTGATGAGGGTCTTCACACTGACTTCGCATGCCTTCT 10866 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1588308730256300