Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Calonectria_20pseudonaviculata_20[genbank_20GCA_5F001696505.1_202016
-07-28] 1,340 sequences; 51,439,042 total letters
Query= NC_027925.1
Length=496396
Score E
Sequences producing significant alignments: (Bits) Value
seq907 93.3 1e-13
seq1157 86.0 2e-11
>seq907
Length=75695
Score = 93.3 bits (102), Expect = 1e-13
Identities = 200/292 (68%), Gaps = 14/292 (5%)
Strand=Plus/Minus
Query 254980 ACCAATGATCCGTGTGTTCAACAACGTGGCTCGCTACGTCGATCAAGGGGGCGGCAAACG 255039
||| ||| ||||||| ||||||||| ||||| || || ||||| || ||| ||| ||
Sbjct 18309 ACCCATGCTCCGTGTATTCAACAACACTGCTCGATATGTTGATCAGGGTGGCAACAAGCG 18250
Query 255040 CCCAGGAGCGTTCACCATCTACCTGGAGCCGTGGCACGCCGAC--ATT-GAACGGTTTTT 255096
|| || || ||| |||||||||| ||||| |||||||||||| ||| ||| |||
Sbjct 18249 ACCCGGTGCTTTCGCCATCTACCTCGAGCCTTGGCACGCCGACGTATTCGAA-----TTT 18195
Query 255097 ACTGCTGTCCGACAAGACC---GGCACCGAGGAGCTGATCGCCCGCGACATCTACACCGC 255153
| | | || ||||| | || | |||||| | || || ||| | | | |||
Sbjct 18194 CTGGATCTTCG-CAAGAACCATGGAAAGGAGGAGGTCCGTGCTCGTGACCTGTTCCTCGC 18136
Query 255154 TGTCTGGTGCTGCGATCTGTTTATGCGACGCGTGGA-ACGAGACGAGACCTGGAGCCTCA 255212
| | ||| | |||| |||| ||| || ||||| | || ||| ||||| || |
Sbjct 18135 TCTGTGGATCCCCGATTTGTTCATGAAGCGTGTGGAGAAGA-ACGGCGACTGGACTCTAA 18077
Query 255213 TGTGTCCCAACTTATCGCCCGGTCTAGTCGACTCTTGGGGTGACGAGTTTGA 255264
||||||||||| | || ||||| | |||| | || || ||||||||
Sbjct 18076 TGTGTCCCAACGAGTGCCCTGGTCTTGCTGACTGCTATGGCGATGAGTTTGA 18025
>seq1157
Length=14967
Score = 86.0 bits (94), Expect = 2e-11
Identities = 115/159 (72%), Gaps = 1/159 (1%)
Strand=Plus/Plus
Query 443709 CGACTAGTCGCTTTTGCTGTGGTCGAAGGACTGTTGTTTAGCGGCAGCTTTAGCCTCCAT 443768
|| || || || || |||| ||||| || | || || ||||| || || || || ||
Sbjct 10709 CGTCTCGTTGCATTCGCTGCTGTCGAGGGTATATTTTTCAGCGGT-GCATTCGCTTCTAT 10767
Query 443769 CTTCTGGTTGAAAAAGCGTGGACTTATGCACGGTCTGACCTTTAGTAACGAACTGATCAG 443828
|||||||||||| ||||| || ||||||| ||| | ||||| ||| || || |||
Sbjct 10768 CTTCTGGTTGAAGAAGCGAGGTCTTATGCCTGGTTTAACCTTCTCTAATGAGCTCATCTC 10827
Query 443829 TCGGGACGAGGGTTTGCATTGCGACTTCGCCTGTCTTCT 443867
||| || |||||| | || |||||||| || |||||
Sbjct 10828 TCGTGATGAGGGTCTTCACACTGACTTCGCATGCCTTCT 10866
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1588308730256300
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |