Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calonectria_20pseudonaviculata_20[genbank_20GCA_5F001696505.1_202016 -07-28] 1,340 sequences; 51,439,042 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq907 197 2e-45 seq1157 98.7 1e-15 seq1283 84.2 3e-11 >seq907 Length=75695 Score = 197 bits (218), Expect = 2e-45 Identities = 1104/1741 (63%), Gaps = 37/1741 (2%) Strand=Plus/Plus Query 110363 CGGAGATAGTACATCCCGGTCTTGAGTCCTTGTTTCCATGCGTACATATGCATAGAAGAG 110422 |||||||||||||| ||||||||||| || ||||||| | | ||||| | Sbjct 16906 CGGAGATAGTACATGCCGGTCTTGAGACCGAGTTTCCAGCCAGTGAAGTGCATGCTCGTT 16965 Query 110423 AGCTTGGACATCGTTGGACTTTCCATGAAGAGGTTCATACTTTGACTTTGGTCAATGAA- 110481 | |||| ||| ||||| | |||| || ||||| | ||| ||||||||||| Sbjct 16966 ATCTTGCCCATGGTTGGGTCCTTCATGTGGATGTTCAGAGATTGGGACTGGTCAATGAAA 17025 Query 110482 GCGCCCCCGTTGTGCCGCCATATCAATGACATCCTTCATCTTAATTTCCCAAACTGTGCG 110541 ||||| | || | || ||||| | | || | | || ||||| || || Sbjct 17026 GCGCCTCGGTCG-GCAGCCATCTGGACCACTTGACGCTGGGAGATCTCCCAGACGGTCTT 17084 Query 110542 ATAGAGATTCTTGATATCATCTGGGATATCTGAGATATTCTGGATGGAACCCCCCGCCTT 110601 |||||| ||| | |||| | || |||| | |||||||| || ||||| || | Sbjct 17085 GTAGAGAGCCTTAACATCAGCAGGAATATTGGGAATATTCTGAATAGAACCGTCCTCGGC 17144 Query 110602 CACCATGAGATCCTTCATATCCTTGGACCAGAGACCAATCTTCTTGAGGTCATTGACGAG 110661 | || | | ||||| | | ||||| || || || | || || || | || Sbjct 17145 GATGATTCGGTTTTTCATGGCATCAGACCAAAGCCCCATGTCGACAAGATCCTTAAGAAG 17204 Query 110662 GTGCTTGTTGACAATGACAAACTCACCTGCGAGGGTTCTTCTCAGGTAGATGTTTGTTGT 110721 |||||| | |||||||| || | | | | ||| ||||| | ||| Sbjct 17205 CCAGGGGTTGACGACCTGGAACTCACCAGCCAAGACACGACGTGAGTATATGTTGGATGT 17264 Query 110722 GTATGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTGG 110781 ||| || || || ||||| || |||||||| || || | ||| ||| || ||||| || Sbjct 17265 GTAAGGCTCGAAACATTCGTTGTTACCCAAAATCTGAGAGGTACTGGCAGTAGGCATGGG 17324 Query 110782 TGCCATCAAAAGACTGTTACGAAGACCCTTCTCCTTGATGCGTTCCTTGAGAACATCCCA 110841 ||||| | ||||||||||| | || | |||||||| | || ||| ||||| Sbjct 17325 CGCCATGAGCAGACTGTTACGGATGCCGTGCTCCTTGACCTGCTCACGGAGGGATTCCCA 17384 Query 110842 GTCGTAGTTGAGCT--TGGTTTCACCTTCCCACATGTCAAACTGAAGCACCCCTTGGGAC 110899 ||| || | || ||||||||| |||| ||||||| ||||| || | || | || Sbjct 17385 GTCCCAGAGGT-CTGATGGTTTCACATTCC-ACATGTCGAACTGGAGAATACCCTCAGAG 17442 Query 110900 GCGGGAGAACCCTCAAAGGTTTCATAGGAACCTTGGGCTTCAGCCAATTC-ACAGCTCGC 110958 | || || |||| ||||| |||| ||| | | | | || | || | || Sbjct 17443 GTAGGGGAGCCCTTGAAGGTAGAGTAGGGACCCTCCTCCTTGGACAGCTGGACTGAG-GC 17501 Query 110959 CTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTTCATC 111018 ||||| |||||||| || ||||||||||| | |||| || ||||| Sbjct 17502 AGTCAGGGCGGCGTGATAGATAGTTTCAAAGATCTGTTTGTTCAGTTCACGAGCTTCGGG 17561 Query 111019 TGAATC-AAATGCGTAGCGGCACAAAATAAATACATCCGCGAGACCTTGAACACCCAAAC 111077 || || ||| || | |||| || ||| ||||||| ||||| || ||||| | || Sbjct 17562 GGACTCGAAAGGCAT-GCGGAGGGCAAGGAATGCATCCGCAAGACCCTGGACACCAACAC 17620 Query 111078 CAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCAACGGGATAAAAATTTCTGT 111137 |||| |||| ||| ||||| || || || || || ||| ||||| || || Sbjct 17621 CAATGGGTCGGTGACGCATGTTGCTGTTACGAGCCTCCTGAACAGGATAGTGGTTGACGT 17680 Query 111138 CAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATGAAGTTTTTCATAAT 111197 |||||| ||| || || ||| ||| |||| || || ||||||| | | Sbjct 17681 CAATGATCTTGTTAAGGTTGCGAACGACAGTCTGAGTGACATCGTGCAGTTTTTGGAAGT 17740 Query 111198 CAAA------AGTGCGAGTCTCTTCATTGACATACTTTGGAAGGGCGATTGATGCCAAAT 111251 || | | ||| | | ||| ||| | |||||||| | || || | | Sbjct 17741 CATAGCAATCATTGC---TGTAGTCA---ACAAAAGAAGGAAGGGCCAGGGAAGCGAGGT 17794 Query 111252 TGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACATAAGTTGGAAC 111311 |||| || || |||||| | | |||| || | || || || || | |||||||| Sbjct 17795 TGCAGACGGCGACCTCATCAGGAGCGCTGTATTCGATGATCTCAGTGCAAAGGTTGGAAC 17854 Query 111312 TCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTGTTGCACGCATCCTTGTAGAGCA 111371 | || || || | ||||| ||||||||||| |||| ||||||||| |||| Sbjct 17855 TGCGGATAGTACCGAGGTTCTTCTGGTTACTCTTGCGGTTGGCGTGATCCTTGTAAAGCA 17914 Query 111372 TGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATAGCCTTCCAAACATCGGCGGCTG 111431 || |||| | || || || ||||| | | |||||| || | ||| | | ||| Sbjct 17915 TGAAGGGGTTGCCAGTTTCGGTCTGAGCCTCGAGAATGGCGTACCAGAGCTTTTGGGCC- 17973 Query 111432 GTACAATGGCGTTG-GCCCGT--CCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCAAACT 111488 | || ||| ||| | || | || || |||||| | |||||| || ||||||| Sbjct 17974 -TTCA-TGGTCTTGCGACCTTTGCCGGCCTTCTCGTAGCTCTCGTAGAGAGCCTCAAACT 18031 Query 111489 CCTCACCCACCGC-GTCGGAGAGACCTGGTGCCTTGTCTGGACAGAAAAGAGACCATTGA 111547 | || || | || ||| | ||||| || || || ||||| | |||| ||| | Sbjct 18032 CATCGCC-ATAGCAGTCAGCAAGACCAGGGCACTCGTTGGGACACATTAGAGTCCAGTCG 18090 Query 111548 CCACCTTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGATCT 111607 || | ||| || ||||||||||| | || || |||||||| | || || || Sbjct 18091 CCGTTCTTCTCCACACGCTTCATGAACAAATCGGGGATCCACAGAGCGAGGAACAGGTCA 18150 Query 111608 CTA-CACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGATATC 111666 | | ||| || |||| || | || ||||| || | || || || || | | || Sbjct 18151 CGAGCACGGA-CCTCCTCCTTTCCATGGTTCTTGCGAAGATCCAGAAATTCGAATACGTC 18209 Query 111667 CGCGTGCCATGGCTCAAGATAGACTGCGATAGATCCCTTTCG---ACGCCCAGCTTGATT 111723 |||||||| ||||| || |||| |||| || || ||| ||| | |||| Sbjct 18210 GGCGTGCCAAGGCTCGAGGTAGATGGCGAAAGCACCGGGTCGCTTGTTGCCACCCTGATC 18269 Query 111724 TACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGATTGACC 111783 ||||| || || ||| ||| ||||| || ||||| || | | ||| | || ||| Sbjct 18270 AACATATCGAGCAGTGTTGTTGAATACACGGAGCATGGGTGTCACACCGTTGGAGGTACC 18329 Query 111784 ATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATGGATGTGCATCCCAATACC 111843 || || || |||| ||| | |||| | | | || | || | || || || Sbjct 18330 GTTGGTACCGGCAATATAAGAGCCAGTGGCACGGATACGGTGAACGTTGAGACCGATGCC 18389 Query 111844 CCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTGATTGA 111903 |||||| || ||||| ||||| | | || || |||| ||||| | || Sbjct 18390 ACCAGCCATTTTGGAGATCATGGCACAGGTCTTGAGGGTGTCATAAATACCCTCAATACT 18449 Query 111904 GTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTACCAGCATT 111963 ||||||||| || ||| |||||||| |||| ||| || || |||||||| || Sbjct 18450 GTCCTCCTTCATGTCGACCAGGAAGCATGAAGACAGCTGGGGCTGAGGAGTACCAGCGTT 18509 Query 111964 GAAGAGGGTTGGTGTTGCGTGAATGAACATACCT-TGGGACATCTTGTCGTATGTCTCCA 112022 |||||| || || | || || |||| | || | |||||| || ||| ||||| | Sbjct 18510 GAAGAGTGTGGGAGAAGCATGTGTGAAGA-ACTTCATGGACATGAGGTTGTAGGTCTCGA 18568 Query 112023 AGACAGAATCAATGTCTTCCCCGTGGATGCCGATTGCGACCCGCATGAACATGTACTGTG 112082 |||| ||||||| || || ||| |||| | ||| ||||| | ||||| ||| | Sbjct 18569 GGACACGCTCAATGTTGTCACCCCAGATACCGACAGAGACACGCATAATCATGTGCTGCG 18628 Query 112083 G 112083 | Sbjct 18629 G 18629 >seq1157 Length=14967 Score = 98.7 bits (108), Expect = 1e-15 Identities = 111/149 (74%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 122670 GTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCTGGCATGAGACC 122729 ||| ||||||||||| || || || || ||||| |||||| || ||| ||||| ||||| Sbjct 10846 GTGAAGACCCTCATCACGAGAGATGAGCTCATTAGAGAAGGTTAAACCAGGCATAAGACC 10787 Query 122730 CCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCACACA 122789 |||||||||||||| | |||| ||||| ||| ||| || |||||||| ||| Sbjct 10786 TCGCTTCTTCAACCAGAAGATAGAAGCGAATGCACCGCTGAAAAATATACCCTCGACAGC 10727 Query 122790 CGCAAACGCAAAAAGGCGTTCGGCGAAGG 122818 || || |||| || |||| || |||| Sbjct 10726 AGCGAATGCAACGAGACGTTGAGCAAAGG 10698 >seq1283 Length=160794 Score = 84.2 bits (92), Expect = 3e-11 Identities = 181/271 (67%), Gaps = 0/271 (0%) Strand=Plus/Minus Query 11682 CAAAGAGATCGCGAACCCTTTTGGCACCCACACCAACAAACATCTCCACAAAGTTTGCGG 11741 |||| || |||||||| | ||||| || ||||||||||| ||||| |||| | Sbjct 18503 CAAACAGTTCGCGAACTCGCTTGGCCCCGACACCAACAAAGATCTCGTCAAACTCACTAC 18444 Query 11742 CAGAGCACTGGATGAATGGGACATTTGATTCACCCGCGATGGCTCGGGCGAGGAGGGTCT 11801 |||| | || ||| || || | ||| || || | ||||| ||||| || |||| Sbjct 18443 CAGACATGTAGAAGAAAGGTACTCCAGCTTCGCCAGCAACAGCTCGTGCGAGAAGCGTCT 18384 Query 11802 TTCCCGTACCTGGCTTACCCGCGAGAAGGGCGCCTCGGGGGATCTTGGCACCACTTCCAA 11861 | || || || || || | | |||| | || ||| | |||||||||| || Sbjct 18383 TACCAGTTCCAGGGGGTCCAACTAAAAGGACACCCTTGGGCAGCTTGGCACCAAGATCAG 18324 Query 11862 AATATCTCTCGGGTTGCTTGAGAAAATCCACAATCTCTTCAAGTTCATCTTTGGCCGCGT 11921 || | | || || | |||||| || || |||| ||| | ||| || || || ||| ||| Sbjct 18323 AAAACTTTTCAGGGTTCTTGAGGAACTCAACAACCTCCTGAAGCTCTTCCTTAGCCTCGT 18264 Query 11922 CAATCCCCTCAACATCACTGAAGCGGGTTTT 11952 | || | |||||| |||| ||||| || Sbjct 18263 CGCAACCGTGAACATCGTTGAATCGGGTGTT 18233 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628021480464000