Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Calonectria_20pseudonaviculata_20[genbank_20GCA_5F001696505.1_202016
-07-28] 1,340 sequences; 51,439,042 total letters
Query= NC_028091.1
Length=196300
Score E
Sequences producing significant alignments: (Bits) Value
seq907 197 2e-45
seq1157 98.7 1e-15
seq1283 84.2 3e-11
>seq907
Length=75695
Score = 197 bits (218), Expect = 2e-45
Identities = 1104/1741 (63%), Gaps = 37/1741 (2%)
Strand=Plus/Plus
Query 110363 CGGAGATAGTACATCCCGGTCTTGAGTCCTTGTTTCCATGCGTACATATGCATAGAAGAG 110422
|||||||||||||| ||||||||||| || ||||||| | | ||||| |
Sbjct 16906 CGGAGATAGTACATGCCGGTCTTGAGACCGAGTTTCCAGCCAGTGAAGTGCATGCTCGTT 16965
Query 110423 AGCTTGGACATCGTTGGACTTTCCATGAAGAGGTTCATACTTTGACTTTGGTCAATGAA- 110481
| |||| ||| ||||| | |||| || ||||| | ||| |||||||||||
Sbjct 16966 ATCTTGCCCATGGTTGGGTCCTTCATGTGGATGTTCAGAGATTGGGACTGGTCAATGAAA 17025
Query 110482 GCGCCCCCGTTGTGCCGCCATATCAATGACATCCTTCATCTTAATTTCCCAAACTGTGCG 110541
||||| | || | || ||||| | | || | | || ||||| || ||
Sbjct 17026 GCGCCTCGGTCG-GCAGCCATCTGGACCACTTGACGCTGGGAGATCTCCCAGACGGTCTT 17084
Query 110542 ATAGAGATTCTTGATATCATCTGGGATATCTGAGATATTCTGGATGGAACCCCCCGCCTT 110601
|||||| ||| | |||| | || |||| | |||||||| || ||||| || |
Sbjct 17085 GTAGAGAGCCTTAACATCAGCAGGAATATTGGGAATATTCTGAATAGAACCGTCCTCGGC 17144
Query 110602 CACCATGAGATCCTTCATATCCTTGGACCAGAGACCAATCTTCTTGAGGTCATTGACGAG 110661
| || | | ||||| | | ||||| || || || | || || || | ||
Sbjct 17145 GATGATTCGGTTTTTCATGGCATCAGACCAAAGCCCCATGTCGACAAGATCCTTAAGAAG 17204
Query 110662 GTGCTTGTTGACAATGACAAACTCACCTGCGAGGGTTCTTCTCAGGTAGATGTTTGTTGT 110721
|||||| | |||||||| || | | | | ||| ||||| | |||
Sbjct 17205 CCAGGGGTTGACGACCTGGAACTCACCAGCCAAGACACGACGTGAGTATATGTTGGATGT 17264
Query 110722 GTATGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTGG 110781
||| || || || ||||| || |||||||| || || | ||| ||| || ||||| ||
Sbjct 17265 GTAAGGCTCGAAACATTCGTTGTTACCCAAAATCTGAGAGGTACTGGCAGTAGGCATGGG 17324
Query 110782 TGCCATCAAAAGACTGTTACGAAGACCCTTCTCCTTGATGCGTTCCTTGAGAACATCCCA 110841
||||| | ||||||||||| | || | |||||||| | || ||| |||||
Sbjct 17325 CGCCATGAGCAGACTGTTACGGATGCCGTGCTCCTTGACCTGCTCACGGAGGGATTCCCA 17384
Query 110842 GTCGTAGTTGAGCT--TGGTTTCACCTTCCCACATGTCAAACTGAAGCACCCCTTGGGAC 110899
||| || | || ||||||||| |||| ||||||| ||||| || | || | ||
Sbjct 17385 GTCCCAGAGGT-CTGATGGTTTCACATTCC-ACATGTCGAACTGGAGAATACCCTCAGAG 17442
Query 110900 GCGGGAGAACCCTCAAAGGTTTCATAGGAACCTTGGGCTTCAGCCAATTC-ACAGCTCGC 110958
| || || |||| ||||| |||| ||| | | | | || | || | ||
Sbjct 17443 GTAGGGGAGCCCTTGAAGGTAGAGTAGGGACCCTCCTCCTTGGACAGCTGGACTGAG-GC 17501
Query 110959 CTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTTCATC 111018
||||| |||||||| || ||||||||||| | |||| || |||||
Sbjct 17502 AGTCAGGGCGGCGTGATAGATAGTTTCAAAGATCTGTTTGTTCAGTTCACGAGCTTCGGG 17561
Query 111019 TGAATC-AAATGCGTAGCGGCACAAAATAAATACATCCGCGAGACCTTGAACACCCAAAC 111077
|| || ||| || | |||| || ||| ||||||| ||||| || ||||| | ||
Sbjct 17562 GGACTCGAAAGGCAT-GCGGAGGGCAAGGAATGCATCCGCAAGACCCTGGACACCAACAC 17620
Query 111078 CAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCAACGGGATAAAAATTTCTGT 111137
|||| |||| ||| ||||| || || || || || ||| ||||| || ||
Sbjct 17621 CAATGGGTCGGTGACGCATGTTGCTGTTACGAGCCTCCTGAACAGGATAGTGGTTGACGT 17680
Query 111138 CAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATGAAGTTTTTCATAAT 111197
|||||| ||| || || ||| ||| |||| || || ||||||| | |
Sbjct 17681 CAATGATCTTGTTAAGGTTGCGAACGACAGTCTGAGTGACATCGTGCAGTTTTTGGAAGT 17740
Query 111198 CAAA------AGTGCGAGTCTCTTCATTGACATACTTTGGAAGGGCGATTGATGCCAAAT 111251
|| | | ||| | | ||| ||| | |||||||| | || || | |
Sbjct 17741 CATAGCAATCATTGC---TGTAGTCA---ACAAAAGAAGGAAGGGCCAGGGAAGCGAGGT 17794
Query 111252 TGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACATAAGTTGGAAC 111311
|||| || || |||||| | | |||| || | || || || || | ||||||||
Sbjct 17795 TGCAGACGGCGACCTCATCAGGAGCGCTGTATTCGATGATCTCAGTGCAAAGGTTGGAAC 17854
Query 111312 TCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTGTTGCACGCATCCTTGTAGAGCA 111371
| || || || | ||||| ||||||||||| |||| ||||||||| ||||
Sbjct 17855 TGCGGATAGTACCGAGGTTCTTCTGGTTACTCTTGCGGTTGGCGTGATCCTTGTAAAGCA 17914
Query 111372 TGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATAGCCTTCCAAACATCGGCGGCTG 111431
|| |||| | || || || ||||| | | |||||| || | ||| | | |||
Sbjct 17915 TGAAGGGGTTGCCAGTTTCGGTCTGAGCCTCGAGAATGGCGTACCAGAGCTTTTGGGCC- 17973
Query 111432 GTACAATGGCGTTG-GCCCGT--CCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCAAACT 111488
| || ||| ||| | || | || || |||||| | |||||| || |||||||
Sbjct 17974 -TTCA-TGGTCTTGCGACCTTTGCCGGCCTTCTCGTAGCTCTCGTAGAGAGCCTCAAACT 18031
Query 111489 CCTCACCCACCGC-GTCGGAGAGACCTGGTGCCTTGTCTGGACAGAAAAGAGACCATTGA 111547
| || || | || ||| | ||||| || || || ||||| | |||| ||| |
Sbjct 18032 CATCGCC-ATAGCAGTCAGCAAGACCAGGGCACTCGTTGGGACACATTAGAGTCCAGTCG 18090
Query 111548 CCACCTTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGATCT 111607
|| | ||| || ||||||||||| | || || |||||||| | || || ||
Sbjct 18091 CCGTTCTTCTCCACACGCTTCATGAACAAATCGGGGATCCACAGAGCGAGGAACAGGTCA 18150
Query 111608 CTA-CACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGATATC 111666
| | ||| || |||| || | || ||||| || | || || || || | | ||
Sbjct 18151 CGAGCACGGA-CCTCCTCCTTTCCATGGTTCTTGCGAAGATCCAGAAATTCGAATACGTC 18209
Query 111667 CGCGTGCCATGGCTCAAGATAGACTGCGATAGATCCCTTTCG---ACGCCCAGCTTGATT 111723
|||||||| ||||| || |||| |||| || || ||| ||| | ||||
Sbjct 18210 GGCGTGCCAAGGCTCGAGGTAGATGGCGAAAGCACCGGGTCGCTTGTTGCCACCCTGATC 18269
Query 111724 TACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGATTGACC 111783
||||| || || ||| ||| ||||| || ||||| || | | ||| | || |||
Sbjct 18270 AACATATCGAGCAGTGTTGTTGAATACACGGAGCATGGGTGTCACACCGTTGGAGGTACC 18329
Query 111784 ATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATGGATGTGCATCCCAATACC 111843
|| || || |||| ||| | |||| | | | || | || | || || ||
Sbjct 18330 GTTGGTACCGGCAATATAAGAGCCAGTGGCACGGATACGGTGAACGTTGAGACCGATGCC 18389
Query 111844 CCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTGATTGA 111903
|||||| || ||||| ||||| | | || || |||| ||||| | ||
Sbjct 18390 ACCAGCCATTTTGGAGATCATGGCACAGGTCTTGAGGGTGTCATAAATACCCTCAATACT 18449
Query 111904 GTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTACCAGCATT 111963
||||||||| || ||| |||||||| |||| ||| || || |||||||| ||
Sbjct 18450 GTCCTCCTTCATGTCGACCAGGAAGCATGAAGACAGCTGGGGCTGAGGAGTACCAGCGTT 18509
Query 111964 GAAGAGGGTTGGTGTTGCGTGAATGAACATACCT-TGGGACATCTTGTCGTATGTCTCCA 112022
|||||| || || | || || |||| | || | |||||| || ||| ||||| |
Sbjct 18510 GAAGAGTGTGGGAGAAGCATGTGTGAAGA-ACTTCATGGACATGAGGTTGTAGGTCTCGA 18568
Query 112023 AGACAGAATCAATGTCTTCCCCGTGGATGCCGATTGCGACCCGCATGAACATGTACTGTG 112082
|||| ||||||| || || ||| |||| | ||| ||||| | ||||| ||| |
Sbjct 18569 GGACACGCTCAATGTTGTCACCCCAGATACCGACAGAGACACGCATAATCATGTGCTGCG 18628
Query 112083 G 112083
|
Sbjct 18629 G 18629
>seq1157
Length=14967
Score = 98.7 bits (108), Expect = 1e-15
Identities = 111/149 (74%), Gaps = 0/149 (0%)
Strand=Plus/Minus
Query 122670 GTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCTGGCATGAGACC 122729
||| ||||||||||| || || || || ||||| |||||| || ||| ||||| |||||
Sbjct 10846 GTGAAGACCCTCATCACGAGAGATGAGCTCATTAGAGAAGGTTAAACCAGGCATAAGACC 10787
Query 122730 CCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCACACA 122789
|||||||||||||| | |||| ||||| ||| ||| || |||||||| |||
Sbjct 10786 TCGCTTCTTCAACCAGAAGATAGAAGCGAATGCACCGCTGAAAAATATACCCTCGACAGC 10727
Query 122790 CGCAAACGCAAAAAGGCGTTCGGCGAAGG 122818
|| || |||| || |||| || ||||
Sbjct 10726 AGCGAATGCAACGAGACGTTGAGCAAAGG 10698
>seq1283
Length=160794
Score = 84.2 bits (92), Expect = 3e-11
Identities = 181/271 (67%), Gaps = 0/271 (0%)
Strand=Plus/Minus
Query 11682 CAAAGAGATCGCGAACCCTTTTGGCACCCACACCAACAAACATCTCCACAAAGTTTGCGG 11741
|||| || |||||||| | ||||| || ||||||||||| ||||| |||| |
Sbjct 18503 CAAACAGTTCGCGAACTCGCTTGGCCCCGACACCAACAAAGATCTCGTCAAACTCACTAC 18444
Query 11742 CAGAGCACTGGATGAATGGGACATTTGATTCACCCGCGATGGCTCGGGCGAGGAGGGTCT 11801
|||| | || ||| || || | ||| || || | ||||| ||||| || ||||
Sbjct 18443 CAGACATGTAGAAGAAAGGTACTCCAGCTTCGCCAGCAACAGCTCGTGCGAGAAGCGTCT 18384
Query 11802 TTCCCGTACCTGGCTTACCCGCGAGAAGGGCGCCTCGGGGGATCTTGGCACCACTTCCAA 11861
| || || || || || | | |||| | || ||| | |||||||||| ||
Sbjct 18383 TACCAGTTCCAGGGGGTCCAACTAAAAGGACACCCTTGGGCAGCTTGGCACCAAGATCAG 18324
Query 11862 AATATCTCTCGGGTTGCTTGAGAAAATCCACAATCTCTTCAAGTTCATCTTTGGCCGCGT 11921
|| | | || || | |||||| || || |||| ||| | ||| || || || ||| |||
Sbjct 18323 AAAACTTTTCAGGGTTCTTGAGGAACTCAACAACCTCCTGAAGCTCTTCCTTAGCCTCGT 18264
Query 11922 CAATCCCCTCAACATCACTGAAGCGGGTTTT 11952
| || | |||||| |||| ||||| ||
Sbjct 18263 CGCAACCGTGAACATCGTTGAATCGGGTGTT 18233
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 628021480464000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |