Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calonectria_20pseudonaviculata_20[genbank_20GCA_5F001696505.1_202016 -07-28] 1,340 sequences; 51,439,042 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq907 176 6e-39 seq1157 134 2e-26 seq1125 86.0 8e-12 >seq907 Length=75695 Score = 176 bits (194), Expect = 6e-39 Identities = 1138/1809 (63%), Gaps = 41/1809 (2%) Strand=Plus/Plus Query 117837 CGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATTGAGGAC 117896 ||||| |||||||| || |||||||| || | |||||| || | ||||| | Sbjct 16906 CGGAGATAGTACATGCCGGTCTTGAGACCGAGTTTCCAGCCAGTGAAGTGCATGCTCGTT 16965 Query 117897 AACTTGGAGAGGGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAA- 117955 | |||| | |||||| | |||| || ||||| | |||||| || || ||||| Sbjct 16966 ATCTTGCCCATGGTTGGGTCCTTCATGTGGATGTTCAGAGATTGGGACTGGTCAATGAAA 17025 Query 117956 GCGTCCCCGATCCGCCGCCATATCAATCACATCCTTCATCTTGATTTCCCACACAGTCCT 118015 ||| || || || || ||||| | | ||| | | ||| ||||| || ||| | Sbjct 17026 GCG-CCTCGGTCGGCAGCCATCTGGACCACTTGACGCTGGGAGATCTCCCAGACGGTCTT 17084 Query 118016 GTAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATGGATCCACCCGCCTT 118075 |||||| ||||| |||| | || |||| ||||| || || || ||| ||| Sbjct 17085 GTAGAGAGCCTTAACATCAGCAGGAATATTGGGAATATTCTGAATAGA---ACCGTCCTC 17141 Query 118076 GACCATGA---GATCCTTCATATCCTTTGACCAGAGACCAATCTTTTTGAGATCCTCCAC 118132 | | |||| | | ||||| | | ||||| || || || | ||||||| | Sbjct 17142 GGCGATGATTCGGTTTTTCATGGCATCAGACCAAAGCCCCATGTCGACAAGATCCTTAAG 17201 Query 118133 GAGATGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTC-TCAGATAGATATTGG 118191 || ||||| || |||||||| || | | || | | || || || |||| Sbjct 17202 AAGCCAGGGGTTGACGACCTGGAACTCACCAGCCAAGACACGACGTGAG-TATATGTTGG 17260 Query 118192 TCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGGCA 118251 ||||| ||||| || || || ||||||||||| || || | || ||| || |||| Sbjct 17261 ATGTGTAAGGCTCGAAACATTCGTTGTTACCCAAAATCTGAGAGGTACTGGCAGTAGGCA 17320 Query 118252 TGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCCTTGAGAGCGT 118311 |||| |||||||| || |||||||||| || | ||| | | | || ||| | | Sbjct 17321 TGGGCGCCATGAGCAGACTGTTACGGATGCCGTGCTCCTTGACCTGCTCACGGAGGGATT 17380 Query 118312 CCCAGTCGTAGTTGAGCTTTGTCTCCCCCTGCCACATATCAAACTGGAGGATACCTTGGG 118371 ||||||| || | || | | | | |||||| || |||||||| ||||| | | Sbjct 17381 CCCAGTCCCAGAGGTCTGATGGTTTCACATTCCACATGTCGAACTGGAGAATACCCTCAG 17440 Query 118372 ACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAATTCGGAGCTCG 118431 | | || || |||| || || || || ||||| ||| | || | ||| | Sbjct 17441 AGGTAGGGGAGCCCTTGAAGGTAGAGTAGGGACCCTCCTCCTTGGACAGCT-GGACTGAG 17499 Query 118432 CC--TCGAGGGCTGCGTGATACATTGTTTCAAAAATGCGAGCATTCATTGCCTTGGCCTC 118489 | || ||||| |||||||| || |||||||| || | |||| | | || || Sbjct 17500 GCAGTC-AGGGCGGCGTGATAGATAGTTTCAAAGATCTGTTTGTTCAGTTCACGAGCTTC 17558 Query 118490 GTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAGACCTTGGACACCGAG 118549 | ||| || || | | ||| || ||| ||||||| ||||| |||||||| | Sbjct 17559 GGGGGACTCGAAAGGCATGCGGAGGGCAAGGAATGCATCCGCAAGACCCTGGACACCAAC 17618 Query 118550 GCCAATTGGGCGATGTCTCATATTAGACTTCCGAGCGGTCTCCACGGGATAAAAATTCCT 118609 ||||| || || || | ||| || || ||||| || || ||||| || Sbjct 17619 ACCAATGGGTCGGTGACGCATGTTGCTGTTACGAGCCTCCTGAACAGGATAGTGGTTGAC 17678 Query 118610 ATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTA 118669 || || | | | || || || |||| || |||| || || || |||| | | Sbjct 17679 GTCAATGATCTTGTTAAGGTTGCGAACGACAGTCTGAGTGACATCGTGCAGTTTTTGGAA 17738 Query 118670 ATCAAAACTGCGAGT-CTCT--TCATTGACATACTTAGGAAGGGCGATTGACGCCAGATT 118726 ||| | | | | || | ||| ||| | ||||||||| | || || || || Sbjct 17739 GTCATAGCAATCATTGCTGTAGTCA---ACAAAAGAAGGAAGGGCCAGGGAAGCGAGGTT 17795 Query 118727 ACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTGCACAAGTTTGAACT 118786 || || | | |||||| | | |||| || || || || ||||| | ||| ||||| Sbjct 17796 GCAGACGGCGACCTCATCAGGAGCGCTGTATTCGATGATCTCAGTGCAAAGGTTGGAACT 17855 Query 118787 CTTAATGGTGCCCAAGTTCTTTTGATTTGACT-TTGTGTTACACGC-ATCCTTGTAAAGC 118844 || || || | |||||| || || ||| ||| | | || ||||||||||||| Sbjct 17856 GCGGATAGTACCGAGGTTCTTCTGGTT--ACTCTTGCGGTTGGCGTGATCCTTGTAAAGC 17913 Query 118845 ATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGACATCGGCAGCT 118904 ||| | || | || || || || || | || |||||| || | ||||| | || Sbjct 17914 ATGAAGGGGTTGCCAGTTTCGGTCTGAGCCTCGAGAATGGCGTACCAGAGCTTTTGGGCC 17973 Query 118905 GGCACAGTGGCGTTGG---CTCGCCCCTCTTCCTCGTACTTTGTGTAGAGGGCTTCAAAC 118961 || ||| ||| || || | | |||||| | |||||| || |||||| Sbjct 17974 TTCA---TGGTCTTGCGACCTTTGCCGGCCTTCTCGTAGCTCTCGTAGAGAGCCTCAAAC 18030 Query 118962 TCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAAGAGAGACCATTGA 119021 || || || | || | || || || || | || || | |||| ||| | Sbjct 18031 TCATCGCCATAGCAGTCAGCAAGACCAGGGCACTCGTTGGGACACATTAGAGTCCAGTCG 18090 Query 119022 CCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCGAGAAGAGATCC 119081 || || ||| || ||||||||||| | || |||||||| || || ||| || || Sbjct 18091 CCGTTCTTCTCCACACGCTTCATGAACAAATCGGGGATCCACAGAGCGAGGAACAGGTCA 18150 Query 119082 CGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCC 119141 ||| || | || || | || || || || | |||| ||| || | | || Sbjct 18151 CGAGCACGGACCTCCTCCTTTCCATGGTTCTTGCGAAGATCCAGAAATTCGAATACGTCG 18210 Query 119142 GCGTGCCACGGTTCCAGGTACACCGCGATTGACCC------CTTACGACGACCAGCCTGG 119195 |||||||| || || ||||| | |||| | || ||| | | ||| |||| Sbjct 18211 GCGTGCCAAGGCTCGAGGTAGATGGCGAAAGCACCGGGTCGCTT--GTTG-CCACCCTGA 18267 Query 119196 TTTACATACCTCGCAGTGGCGTTAAATACACGAAGCATTGGAATGATACCATCGGATTGG 119255 | ||||| | |||||| ||| |||||||| ||||| || | | ||| | ||| Sbjct 18268 TCAACATATCGAGCAGTGTTGTTGAATACACGGAGCATGGGTGTCACACCGTTGGAGGTA 18327 Query 119256 CCATTTGTCCCCCGAATACGAGACTTATTGGCTCTGACATCGTGGATGTGCATACCAATA 119315 || || || || |||| ||| | |||| | || | ||| | || | ||| || Sbjct 18328 CCGTTGGTACCGGCAATATAAGAGCCAGTGGCACGGATACGGTGAACGTTGAGACCGATG 18387 Query 119316 CCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAGATCCCATCGATC 119375 || || ||| || ||||| || || | |||| || | || || || || || Sbjct 18388 CCACCAGCCATTTTGGAGATCATGGCACAGGTCTTGAGGGTGTCATAAATACCCTCAATA 18447 Query 119376 GAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGAGGCCTGGGTGTACCAGCG 119435 ||| |||| | ||| |||||||| |||| || ||| || ||||||||| Sbjct 18448 CTGTCCTCCTTCATGTCGACCAGGAAGCATGAAGACAGCTGGGGCTGAGGAGTACCAGCG 18507 Query 119436 TTGAAGAGAGTTGGTGTCGCGTGGATGAACATACCT-TGGGACATCTTGTCGTAGGTCTC 119494 |||||||| || || | || || |||| | || | |||||| || ||||||||| Sbjct 18508 TTGAAGAGTGTGGGAGAAGCATGTGTGAAGA-ACTTCATGGACATGAGGTTGTAGGTCTC 18566 Query 119495 CAAGACGGCGGGAATGTCTTCCCCGTGAATACCGATCGAGACCCGCATAAACATGTATTG 119554 | ||| ||||| || || ||||||| ||||| ||||||| ||||| || Sbjct 18567 GAGGACACGCTCAATGTTGTCACCCCAGATACCGACAGAGACACGCATAATCATGTGCTG 18626 Query 119555 GGGTGTTTCCATCAGGATACCATCGAGCCTCTGGAGGTAACTCTTCTCCAAGGTCTTGAG 119614 ||| || | | ||||||| | | | |||||||| ||| | |||||||| Sbjct 18627 CGGTCGCTCAACAATCTTACCATCAATCTTGAGGAGGTAAGATCGCTCGAGGGTCTTGAA 18686 Query 119615 ACCAAAATA 119623 ||||| || Sbjct 18687 GCCAAAGTA 18695 >seq1157 Length=14967 Score = 134 bits (148), Expect = 2e-26 Identities = 161/216 (75%), Gaps = 6/216 (3%) Strand=Plus/Minus Query 130027 GTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACC 130086 ||| |||||||| ||||| |||||||| ||||| |||||| | ||| ||||| ||||| Sbjct 10846 GTGAAGACCCTCATCACGAGAGATGAGCTCATTAGAGAAGGTTAAACCAGGCATAAGACC 10787 Query 130087 CCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACA 130146 ||||||||||||||||| || | | |||| || ||| || || ||||| ||| Sbjct 10786 TCGCTTCTTCAACCAGAAGATAGAAGCGAATGCACCGCTGAAAAATATACCCTCGACAGC 10727 Query 130147 CGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGGGACT--TTGTATCA-AACCACTTCAT 130203 ||||| |||| |||||| | |||||||| || || |||| | | |||| | | Sbjct 10726 AGCGAATGCAACGAGACGTTGAGCAAAGG---TGGCCTGCTTGTCCGAGATCCACCTGAG 10670 Query 130204 CGCCCACTGCGCCTTTTTCTCGATACACGGGACGGT 130239 ||||||| |||||||||| ||| |||||||| || Sbjct 10669 GGCCCACTCTGCCTTTTTCTTGATGCACGGGACTGT 10634 >seq1125 Length=136914 Score = 86.0 bits (94), Expect = 8e-12 Identities = 275/416 (66%), Gaps = 18/416 (4%) Strand=Plus/Plus Query 14063 CGATCAAAGCGACCTGGGCGGAGGAGGGCGTCGTCAAGGATATCAATGCGGTTCGTCGCC 14122 || ||||| || || || || | | ||| | |||||| || || || || || | Sbjct 3644 CGGTCAAACCGTCCAGGTCGCATCAAGGCCTTGTCAAGCATGTCCGCTCGATTGGTACCG 3703 Query 14123 GCGATGACAACGA--TGCCCGTCTCGTTATCAAAGCCATCCATCTCAGTCAAGAGTTGAT 14180 || | |||||| | ||| | || ||| | || ||| ||||||||||| | | ||| | Sbjct 3704 GCCAGGACAACAACTTGCTC-TCGCGTGTTGAA-GCCGTCCATCTCAGTAAGAATTTGGT 3761 Query 14181 TGATGGTTTGTTCGCGTTCATCATTCGCAGGCATACCACCCGCACTG-CGT----TGCTT 14235 ||| || ||| || ||||| || || | ||| | |||| | | |||| Sbjct 3762 TGAGAGTGGCTTCACGCTCATCGTTGCCACCAAAACCCCGACCACTCTCCTGACGTGCTC 3821 Query 14236 -ACCGACGGCGTCAATTTCATCGATGAAAACGATACATGGTTGATTTTCACGGGCAACTT 14294 ||| | ||||| |||||||||||||||| || || || || | ||| | ||| Sbjct 3822 GACCAATAGCGTCGATTTCATCGATGAAAATAATGCAAGGGGCGTTCTTACG---ACCTT 3878 Query 14295 CA---AAGATATCTCGCACTCTCTTGGCACCGACACCCACAAACATCTCCACAAAATTGG 14351 || || | || || |||| | ||| ||||| || |||||||| || || | || Sbjct 3879 CAGCGAATAGGTCCCGTACTCGGGAAGGACCAACACCAACGAACATCTCGACGAACTCGG 3938 Query 14352 CGGCG-GAACATTGGATGAAGGGGACGTTAGATTCACCCGCGATGGCTCGGGCGAGGAGG 14410 || ||| | || |||||| ||| ||| ||||| || |||| |||||| || Sbjct 3939 AACCGCTCACACT-GAAGAAGGGAACGCCAGACTCACCGGCAGTGGCCTTGGCGAGCAGC 3997 Query 14411 GTCTTCCCCGTCCCTGGTTTCCCTGCGAGAAGGGCACCACGTGGGATCCTGGCACC 14466 ||||| || || || ||| || || |||| |||||| || || ||| ||||||| Sbjct 3998 GTCTTACCAGTACCAGGTGGGCCAGCAAGAATGGCACCTCGGGGAATCTTGGCACC 4053 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618424841210400