Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calonectria_20pseudonaviculata_20[genbank_20GCA_5F001696505.1_202016 -07-28] 1,340 sequences; 51,439,042 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq907 269 3e-67 seq1157 98.7 1e-15 seq1125 86.0 7e-12 >seq907 Length=75695 Score = 269 bits (298), Expect = 3e-67 Identities = 914/1401 (65%), Gaps = 47/1401 (3%) Strand=Plus/Minus Query 104222 CCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGTC 104281 || ||| ||||| | ||||| || | ||||||| || || ||||||| |||| Sbjct 18629 CCGCAGCACATGATTATGCGTGTCTCTGTCGGTATCTGGGGTGACAACATTGAGCGTGTC 18570 Query 104282 TTGGAGACATACGACAAGATGTCCCA-AGGTATGTTCATTCACGCAACACCAACCCTCTT 104340 | ||||| ||| || |||||| | || | |||| || || | || || ||||| Sbjct 18569 CTCGAGACCTACAACCTCATGTCCATGAAGT-TCTTCACACATGCTTCTCCCACACTCTT 18511 Query 104341 CAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGA 104400 ||| |||||||| || ||||| |||| |||||||| ||| || |||||||| Sbjct 18510 CAACGCTGGTACTCCTCAGCCCCAGCTGTCTTCATGCTTCCTGGTCGACATGAAGGAGGA 18451 Query 104401 CTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGG 104460 | || | ||||| |||| || || | | ||||| ||||| || |||||| Sbjct 18450 CAGTATTGAGGGTATTTATGACACCCTCAAGACCTGTGCCATGATCTCCAAAATGGCTGG 18391 Query 104461 GGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAAA 104520 || || || | || | || | | | |||| | ||| |||| || || || Sbjct 18390 TGGCATCGGTCTCAACGTTCACCGTATCCGTGCCACTGGCTCTTATATTGCCGGTACCAA 18331 Query 104521 TGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGT 104580 ||| || | ||| | | || ||||| || ||||| ||| ||| || || ||||| Sbjct 18330 CGGTACCTCCAACGGTGTGACACCCATGCTCCGTGTATTCAACAACACTGCTCGATATGT 18271 Query 104581 AAATCAAGCTGGGCGT---CGAAAGGGATCTATCGCAGTCTATCTTGAGCCATGGCACGC 104637 |||| | ||| ||| || || |||| |||| || ||||| |||||||| Sbjct 18270 TGATCAGGGTGGCAACAAGCGACCCGGTGCTTTCGCCATCTACCTCGAGCCTTGGCACGC 18211 Query 104638 GGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCGCGGTGC-C 104696 || | | || || || || | || ||||| || | ||||||| || ||| | Sbjct 18210 CGACGTATTCGAATTTCTGGATCTTCGCAAGAACCATGGAAAGGAGGAGGTCCG-TGCTC 18152 Query 104697 GCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAGTG 104756 | || || ||| |||||| ||||| || ||| | ||||||||| | || ||| ||| | Sbjct 18151 GTGACCTGTTCCTCGCTCTGTGGATCCCCGATTTGTTCATGAAGCGTGTGGAGAAGAACG 18092 Query 104757 GCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGA-TGCCGTGGGTGAG 104815 || | ||| |||| | ||||| || || |||||||| | || ||| ||| || Sbjct 18091 GCGACTGGACTCTAATGTGTCCCAACGAGTGCCCTGGTCTTGCTGACTGCTATGGC-GAT 18033 Query 104816 GAGTTTGAAGCCCTTTACACAAAGTACGAGGAAG------AAGGTCGGGCGACTGCGACG 104869 |||||||| || || ||| | |||||| | | ||||||| ||| || | Sbjct 18032 GAGTTTGAGGCTCTCTACGAGAGCTACGAGAAGGCCGGCAAAGGTCGCAAGACCATGAAG 17973 Query 104870 GTGCCAGCTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCA 104929 | ||| || | ||| | || |||||| || |||| ||||| ||||| | || Sbjct 17972 GC-CCAAAAGC-----TCTGGTACGCCATTCTCGAGGCTCAGACCGAAACTGGCAACCCC 17919 Query 104930 TACATGCTTTACAAAGA---CGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTG 104986 | |||||||||||| || |||| |||| |||||||| || ||||| | ||| Sbjct 17918 TTCATGCTTTACAAGGATCACGCC---AACCGCAAGAGTAACCAGAAGAACCTCGGTACT 17862 Query 104987 ATCAAGAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCT 105046 ||| |||||||| || || || || ||| | |||| | | |||||| || Sbjct 17861 ATCCGCAGTTCCAACCTTTGCACTGAGATCATCGAATACAGCGCTCCTGATGAGGTCGCC 17802 Query 105047 GTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGACA--T 105104 || || |||||||| || | || || || | ||| || | | || ||| || | Sbjct 17801 GTCTGCAACCTCGCTTCCCTGGCCCTTCCTTCTTTTGTTGA-CTACAG-CAATGATTGCT 17744 Query 105105 TTGATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAACAGAGTTA 105164 ||| | ||||||| ||||| || || | |||||| ||||| |||| | | Sbjct 17743 ATGACTTCCAAAAACTGCACGATGTCACTCAGACTGTCGTTCGCAACCTTAACAAGATCA 17684 Query 105165 TTGATAGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAA 105224 |||| || || || ||| || |||||||| || ||| | ||||| || | Sbjct 17683 TTGACGTCAACCACTATCCTGTTCAGGAGGCTCGTAACAGCAACATGCGTCACCGACCCA 17624 Query 105225 TTGGTCTCGGTGTTCAGGGTCTCGCGGATGTATTCATTCTTTG---TCGCCACGCATTT- 105280 ||||| | ||||| |||||||| ||||||| ||||| ||| || || || ||| Sbjct 17623 TTGGTGTTGGTGTCCAGGGTCTTGCGGATG----CATTCCTTGCCCTCCGCATGCCTTTC 17568 Query 105281 GATTCCGACGAAGCGAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCACGCCGCT 105340 || ||| |||||| ||| | || | || ||||| || || ||||||||||| Sbjct 17567 GAGTCCCCCGAAGCTCGTGAACTGAACAAACAGATCTTTGAAACTATCTATCACGCCGCC 17508 Query 105341 CTTGAGGCG--AGTTCAGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTT 105398 || || ||| ||| || | ||| || ||||| || ||||| |||| | Sbjct 17507 CTGACTGCCTCAGTCCAGC--TGTCCAAGGAGGAGGGTCCCTACTCTACCTTCAAGGGCT 17450 Query 105399 CTCCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCA--AGCTTCA 105456 | || | || | || | || || || || |||||| || |||| |||| || | Sbjct 17449 CCCCTACCTCTGAGGGTATTCTCCAGTTCGACATGTGG-AATGTGAAACCATCAGAC-CT 17392 Query 105457 CTACGACTGGGAAGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTCCT 105516 || ||||||||| | ||| || | |||||||| | || | ||||||||||| || Sbjct 17391 CTGGGACTGGGAATCCCTCCGTGAGCAGGTCAAGGAGCACGGCATCCGTAACAGTCTGCT 17332 Query 105517 CATGGCTCCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGA 105576 |||||| || ||||| || ||| ||| | || || |||||||| || ||||| || || Sbjct 17331 CATGGCGCCCATGCCTACTGCCAGTACCTCTCAGATTTTGGGTAACAACGAATGTTTCGA 17272 Query 105577 ACCCTACACGACGAACATCTA 105597 || ||||| | ||||| || Sbjct 17271 GCCTTACACATCCAACATATA 17251 >seq1157 Length=14967 Score = 98.7 bits (108), Expect = 1e-15 Identities = 111/149 (74%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 94796 CCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCT 94855 |||||||| | || ||| | ||||| || ||| |||||||| || ||| ||| | | Sbjct 10698 CCTTTGCTCAACGTCTCGTTGCATTCGCTGCTGTCGAGGGTATATTTTTCAGCGGTGCAT 10757 Query 94856 TCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACG 94915 || |||| | ||| | |||||||||||||| ||||| ||| | |||||| || | Sbjct 10758 TCGCTTCTATCTTCTGGTTGAAGAAGCGAGGTCTTATGCCTGGTTTAACCTTCTCTAATG 10817 Query 94916 AGCTTATCTCTCGTGACGAGGGACTCCAC 94944 |||| ||||||||||| ||||| || ||| Sbjct 10818 AGCTCATCTCTCGTGATGAGGGTCTTCAC 10846 >seq1125 Length=136914 Score = 86.0 bits (94), Expect = 7e-12 Identities = 271/412 (66%), Gaps = 10/412 (2%) Strand=Plus/Plus Query 9524 CGATCAAAGCGACCTGGACGAAGGAGCGCGTCATCAAGGATATCAACGCGATTCGTCGCG 9583 || ||||| || || || || | | || | ||||| || || | ||||| || || Sbjct 3644 CGGTCAAACCGTCCAGGTCGCATCAAGGCCTTGTCAAGCATGTCCGCTCGATTGGTACCG 3703 Query 9584 GCGATGACAACAA-TACCTGTTTCATTATCAAAACCATCCATCTCTGTCAAAAGTTGGTT 9642 || | |||||||| | || | | | | || || |||||||| || | || |||||| Sbjct 3704 GCCAGGACAACAACTTGCTCTCGCGTGTTGAAG-CCGTCCATCTCAGTAAGAATTTGGTT 3762 Query 9643 AATAGTTTGTTCCCGTTCATCATTCGCTGGCATACCACCAGCACTG-CGT----TGCTTT 9697 | ||| ||| || ||||| || | | ||| | | |||| | | |||| Sbjct 3763 GAGAGTGGCTTCACGCTCATCGTTGCCACCAAAACCCCGACCACTCTCCTGACGTGCTCG 3822 Query 9698 CCCACG-GCATCAATCTCATCAATGAAGACGATGCATGGTTGATTTTCGCGAGCGACTTC 9756 ||| || || || ||||| ||||| | ||||| || || | ||| | | | Sbjct 3823 ACCAATAGCGTCGATTTCATCGATGAAAATAATGCAAGGGGCGTTCTTACGACCTTCAGC 3882 Query 9757 AAAGAGATCCCGTACACGCTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTGCGGC 9816 || || |||||||| || | || |||||||| |||||||| || || | | | Sbjct 3883 GAATAGGTCCCGTACTCGGGAAGGACCAACACCAACGAACATCTCGACGAACTCGGAACC 3942 Query 9817 GGA-ACATTGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTCT 9875 | ||| || | |||||| || ||| ||||| ||| |||| |||||| || |||| Sbjct 3943 GCTCACACTGAA-GAAGGGAACGCCAGACTCACCGGCAGTGGCCTTGGCGAGCAGCGTCT 4001 Query 9876 TACCCGTACCTGGCTTACCCGCGAGGAGGGCACCTCGTGGAATCTTGGCGCC 9927 |||| ||||| || || || || | ||||||||| ||||||||||| || Sbjct 4002 TACCAGTACCAGGTGGGCCAGCAAGAATGGCACCTCGGGGAATCTTGGCACC 4053 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583251030381600