Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Calonectria_20pseudonaviculata_20[genbank_20GCA_5F001696505.1_202016
-07-28] 1,340 sequences; 51,439,042 total letters
Query= NC_028093.1
Length=182309
Score E
Sequences producing significant alignments: (Bits) Value
seq907 269 3e-67
seq1157 98.7 1e-15
seq1125 86.0 7e-12
>seq907
Length=75695
Score = 269 bits (298), Expect = 3e-67
Identities = 914/1401 (65%), Gaps = 47/1401 (3%)
Strand=Plus/Minus
Query 104222 CCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGTC 104281
|| ||| ||||| | ||||| || | ||||||| || || ||||||| ||||
Sbjct 18629 CCGCAGCACATGATTATGCGTGTCTCTGTCGGTATCTGGGGTGACAACATTGAGCGTGTC 18570
Query 104282 TTGGAGACATACGACAAGATGTCCCA-AGGTATGTTCATTCACGCAACACCAACCCTCTT 104340
| ||||| ||| || |||||| | || | |||| || || | || || |||||
Sbjct 18569 CTCGAGACCTACAACCTCATGTCCATGAAGT-TCTTCACACATGCTTCTCCCACACTCTT 18511
Query 104341 CAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGA 104400
||| |||||||| || ||||| |||| |||||||| ||| || ||||||||
Sbjct 18510 CAACGCTGGTACTCCTCAGCCCCAGCTGTCTTCATGCTTCCTGGTCGACATGAAGGAGGA 18451
Query 104401 CTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGG 104460
| || | ||||| |||| || || | | ||||| ||||| || ||||||
Sbjct 18450 CAGTATTGAGGGTATTTATGACACCCTCAAGACCTGTGCCATGATCTCCAAAATGGCTGG 18391
Query 104461 GGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAAA 104520
|| || || | || | || | | | |||| | ||| |||| || || ||
Sbjct 18390 TGGCATCGGTCTCAACGTTCACCGTATCCGTGCCACTGGCTCTTATATTGCCGGTACCAA 18331
Query 104521 TGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGT 104580
||| || | ||| | | || ||||| || ||||| ||| ||| || || |||||
Sbjct 18330 CGGTACCTCCAACGGTGTGACACCCATGCTCCGTGTATTCAACAACACTGCTCGATATGT 18271
Query 104581 AAATCAAGCTGGGCGT---CGAAAGGGATCTATCGCAGTCTATCTTGAGCCATGGCACGC 104637
|||| | ||| ||| || || |||| |||| || ||||| ||||||||
Sbjct 18270 TGATCAGGGTGGCAACAAGCGACCCGGTGCTTTCGCCATCTACCTCGAGCCTTGGCACGC 18211
Query 104638 GGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCGCGGTGC-C 104696
|| | | || || || || | || ||||| || | ||||||| || ||| |
Sbjct 18210 CGACGTATTCGAATTTCTGGATCTTCGCAAGAACCATGGAAAGGAGGAGGTCCG-TGCTC 18152
Query 104697 GCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAGTG 104756
| || || ||| |||||| ||||| || ||| | ||||||||| | || ||| ||| |
Sbjct 18151 GTGACCTGTTCCTCGCTCTGTGGATCCCCGATTTGTTCATGAAGCGTGTGGAGAAGAACG 18092
Query 104757 GCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGA-TGCCGTGGGTGAG 104815
|| | ||| |||| | ||||| || || |||||||| | || ||| ||| ||
Sbjct 18091 GCGACTGGACTCTAATGTGTCCCAACGAGTGCCCTGGTCTTGCTGACTGCTATGGC-GAT 18033
Query 104816 GAGTTTGAAGCCCTTTACACAAAGTACGAGGAAG------AAGGTCGGGCGACTGCGACG 104869
|||||||| || || ||| | |||||| | | ||||||| ||| || |
Sbjct 18032 GAGTTTGAGGCTCTCTACGAGAGCTACGAGAAGGCCGGCAAAGGTCGCAAGACCATGAAG 17973
Query 104870 GTGCCAGCTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCA 104929
| ||| || | ||| | || |||||| || |||| ||||| ||||| | ||
Sbjct 17972 GC-CCAAAAGC-----TCTGGTACGCCATTCTCGAGGCTCAGACCGAAACTGGCAACCCC 17919
Query 104930 TACATGCTTTACAAAGA---CGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTG 104986
| |||||||||||| || |||| |||| |||||||| || ||||| | |||
Sbjct 17918 TTCATGCTTTACAAGGATCACGCC---AACCGCAAGAGTAACCAGAAGAACCTCGGTACT 17862
Query 104987 ATCAAGAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCT 105046
||| |||||||| || || || || ||| | |||| | | |||||| ||
Sbjct 17861 ATCCGCAGTTCCAACCTTTGCACTGAGATCATCGAATACAGCGCTCCTGATGAGGTCGCC 17802
Query 105047 GTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGACA--T 105104
|| || |||||||| || | || || || | ||| || | | || ||| || |
Sbjct 17801 GTCTGCAACCTCGCTTCCCTGGCCCTTCCTTCTTTTGTTGA-CTACAG-CAATGATTGCT 17744
Query 105105 TTGATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAACAGAGTTA 105164
||| | ||||||| ||||| || || | |||||| ||||| |||| | |
Sbjct 17743 ATGACTTCCAAAAACTGCACGATGTCACTCAGACTGTCGTTCGCAACCTTAACAAGATCA 17684
Query 105165 TTGATAGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAA 105224
|||| || || || ||| || |||||||| || ||| | ||||| || |
Sbjct 17683 TTGACGTCAACCACTATCCTGTTCAGGAGGCTCGTAACAGCAACATGCGTCACCGACCCA 17624
Query 105225 TTGGTCTCGGTGTTCAGGGTCTCGCGGATGTATTCATTCTTTG---TCGCCACGCATTT- 105280
||||| | ||||| |||||||| ||||||| ||||| ||| || || || |||
Sbjct 17623 TTGGTGTTGGTGTCCAGGGTCTTGCGGATG----CATTCCTTGCCCTCCGCATGCCTTTC 17568
Query 105281 GATTCCGACGAAGCGAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCACGCCGCT 105340
|| ||| |||||| ||| | || | || ||||| || || |||||||||||
Sbjct 17567 GAGTCCCCCGAAGCTCGTGAACTGAACAAACAGATCTTTGAAACTATCTATCACGCCGCC 17508
Query 105341 CTTGAGGCG--AGTTCAGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTT 105398
|| || ||| ||| || | ||| || ||||| || ||||| |||| |
Sbjct 17507 CTGACTGCCTCAGTCCAGC--TGTCCAAGGAGGAGGGTCCCTACTCTACCTTCAAGGGCT 17450
Query 105399 CTCCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCA--AGCTTCA 105456
| || | || | || | || || || || |||||| || |||| |||| || |
Sbjct 17449 CCCCTACCTCTGAGGGTATTCTCCAGTTCGACATGTGG-AATGTGAAACCATCAGAC-CT 17392
Query 105457 CTACGACTGGGAAGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTCCT 105516
|| ||||||||| | ||| || | |||||||| | || | ||||||||||| ||
Sbjct 17391 CTGGGACTGGGAATCCCTCCGTGAGCAGGTCAAGGAGCACGGCATCCGTAACAGTCTGCT 17332
Query 105517 CATGGCTCCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGA 105576
|||||| || ||||| || ||| ||| | || || |||||||| || ||||| || ||
Sbjct 17331 CATGGCGCCCATGCCTACTGCCAGTACCTCTCAGATTTTGGGTAACAACGAATGTTTCGA 17272
Query 105577 ACCCTACACGACGAACATCTA 105597
|| ||||| | ||||| ||
Sbjct 17271 GCCTTACACATCCAACATATA 17251
>seq1157
Length=14967
Score = 98.7 bits (108), Expect = 1e-15
Identities = 111/149 (74%), Gaps = 0/149 (0%)
Strand=Plus/Plus
Query 94796 CCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCT 94855
|||||||| | || ||| | ||||| || ||| |||||||| || ||| ||| | |
Sbjct 10698 CCTTTGCTCAACGTCTCGTTGCATTCGCTGCTGTCGAGGGTATATTTTTCAGCGGTGCAT 10757
Query 94856 TCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACG 94915
|| |||| | ||| | |||||||||||||| ||||| ||| | |||||| || |
Sbjct 10758 TCGCTTCTATCTTCTGGTTGAAGAAGCGAGGTCTTATGCCTGGTTTAACCTTCTCTAATG 10817
Query 94916 AGCTTATCTCTCGTGACGAGGGACTCCAC 94944
|||| ||||||||||| ||||| || |||
Sbjct 10818 AGCTCATCTCTCGTGATGAGGGTCTTCAC 10846
>seq1125
Length=136914
Score = 86.0 bits (94), Expect = 7e-12
Identities = 271/412 (66%), Gaps = 10/412 (2%)
Strand=Plus/Plus
Query 9524 CGATCAAAGCGACCTGGACGAAGGAGCGCGTCATCAAGGATATCAACGCGATTCGTCGCG 9583
|| ||||| || || || || | | || | ||||| || || | ||||| || ||
Sbjct 3644 CGGTCAAACCGTCCAGGTCGCATCAAGGCCTTGTCAAGCATGTCCGCTCGATTGGTACCG 3703
Query 9584 GCGATGACAACAA-TACCTGTTTCATTATCAAAACCATCCATCTCTGTCAAAAGTTGGTT 9642
|| | |||||||| | || | | | | || || |||||||| || | || ||||||
Sbjct 3704 GCCAGGACAACAACTTGCTCTCGCGTGTTGAAG-CCGTCCATCTCAGTAAGAATTTGGTT 3762
Query 9643 AATAGTTTGTTCCCGTTCATCATTCGCTGGCATACCACCAGCACTG-CGT----TGCTTT 9697
| ||| ||| || ||||| || | | ||| | | |||| | | ||||
Sbjct 3763 GAGAGTGGCTTCACGCTCATCGTTGCCACCAAAACCCCGACCACTCTCCTGACGTGCTCG 3822
Query 9698 CCCACG-GCATCAATCTCATCAATGAAGACGATGCATGGTTGATTTTCGCGAGCGACTTC 9756
||| || || || ||||| ||||| | ||||| || || | ||| | | |
Sbjct 3823 ACCAATAGCGTCGATTTCATCGATGAAAATAATGCAAGGGGCGTTCTTACGACCTTCAGC 3882
Query 9757 AAAGAGATCCCGTACACGCTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTGCGGC 9816
|| || |||||||| || | || |||||||| |||||||| || || | | |
Sbjct 3883 GAATAGGTCCCGTACTCGGGAAGGACCAACACCAACGAACATCTCGACGAACTCGGAACC 3942
Query 9817 GGA-ACATTGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTCT 9875
| ||| || | |||||| || ||| ||||| ||| |||| |||||| || ||||
Sbjct 3943 GCTCACACTGAA-GAAGGGAACGCCAGACTCACCGGCAGTGGCCTTGGCGAGCAGCGTCT 4001
Query 9876 TACCCGTACCTGGCTTACCCGCGAGGAGGGCACCTCGTGGAATCTTGGCGCC 9927
|||| ||||| || || || || | ||||||||| ||||||||||| ||
Sbjct 4002 TACCAGTACCAGGTGGGCCAGCAAGAATGGCACCTCGGGGAATCTTGGCACC 4053
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 583251030381600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |